Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310D02f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2DFS2 Cluster: XYPPX repeat family protein; n=3; Trich...    33   5.2  
UniRef50_A5UWT4 Cluster: Beta-galactosidase; n=2; Roseiflexus|Re...    32   6.9  
UniRef50_UPI0000DAF99C Cluster: peptidase E; n=1; Campylobacter ...    32   9.2  
UniRef50_Q1G803 Cluster: Hypothetical membrane protein; n=3; Lac...    32   9.2  
UniRef50_Q7RS32 Cluster: Putative uncharacterized protein PY0053...    32   9.2  
UniRef50_Q6CTQ2 Cluster: Kluyveromyces lactis strain NRRL Y-1140...    32   9.2  

>UniRef50_A2DFS2 Cluster: XYPPX repeat family protein; n=3;
           Trichomonas vaginalis G3|Rep: XYPPX repeat family
           protein - Trichomonas vaginalis G3
          Length = 496

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 12/43 (27%), Positives = 26/43 (60%)
 Frame = -3

Query: 198 LTSEHSRYVSILWLIFGFEVFFDTFLYIVQHMRRIYIVKQQSH 70
           + S   +++  L++IFG+ +FFD    I+   ++I + ++ SH
Sbjct: 305 MNSGFGKFLYGLFMIFGYSIFFDNLFIILAKYKKITVKRKVSH 347


>UniRef50_A5UWT4 Cluster: Beta-galactosidase; n=2; Roseiflexus|Rep:
            Beta-galactosidase - Roseiflexus sp. RS-1
          Length = 1020

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 3/93 (3%)
 Frame = +1

Query: 172  YISTMFRCQSTEATHLCIMDAD---LKLSNENNYDIGGAYRKDKPEFWFYYTTTMCPKHV 342
            YI        T+   L + D D   L +  +  ++    +  D   F   +T  + P+  
Sbjct: 915  YIMPQEHGHKTDVRFLLLTDQDRRGLFIGGQPTFEFSALHHSDDDLFRALHTIDLTPRAE 974

Query: 343  YLLNLFVCHRQSGTFALGVPNSSEMSHNKQSPY 441
              LNL   HR  GT + G P++ E      S Y
Sbjct: 975  VFLNLDAAHRGLGTLSCG-PDTLEQHRLMDSVY 1006


>UniRef50_UPI0000DAF99C Cluster: peptidase E; n=1; Campylobacter
           concisus 13826|Rep: peptidase E - Campylobacter concisus
           13826
          Length = 191

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -3

Query: 216 VCGFRRLTSEHSRYVSILWLIFGFEVFFDTFLYIVQHMRRIYIVKQQSHRLLFTFY*FQI 37
           +  F  LT  HSR    LWL  G  ++F   LY+ Q +  I++     H L+   + +Q+
Sbjct: 17  LAAFFSLTFLHSRE---LWLTLGLNIYFLEKLYLFQPLTSIFMHAGTGHLLMNMLFLYQV 73


>UniRef50_Q1G803 Cluster: Hypothetical membrane protein; n=3;
           Lactobacillus delbrueckii subsp. bulgaricus|Rep:
           Hypothetical membrane protein - Lactobacillus
           delbrueckii subsp. bulgaricus (strain ATCC 11842 /
           DSM20081)
          Length = 222

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = -3

Query: 297 WLIFSVCTPYVIVIFIAKFKVRIHNAKVCGFRRLTSEHSRY 175
           +L+FS+  P  I++ ++ F+VR+ +  V G RR+  +   Y
Sbjct: 53  FLVFSLLVPVQILLLLSTFRVRLQDIYVTGSRRIIWKQLEY 93


>UniRef50_Q7RS32 Cluster: Putative uncharacterized protein PY00534;
           n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY00534 - Plasmodium yoelii yoelii
          Length = 559

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = -3

Query: 405 VWYSEGKSPALSMTHKQIQQVNMFRTHSCGVVKPKFWLIFSVCTPYVIVIFI-AKFKVRI 229
           V Y++ K P     +++   + +F      V+ PKF  +  + TPY  ++ I  ++K ++
Sbjct: 66  VAYNKSKVPIQEKLYRKQNIIPIFHFGKHNVINPKFTQVNKIYTPYSFLLLIFVEYKYKM 125

Query: 228 HN 223
           +N
Sbjct: 126 YN 127


>UniRef50_Q6CTQ2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
           chromosome C of strain NRRL Y- 1140 of Kluyveromyces
           lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
           lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-
           1140 of Kluyveromyces lactis - Kluyveromyces lactis
           (Yeast) (Candida sphaerica)
          Length = 775

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 17/55 (30%), Positives = 31/55 (56%)
 Frame = +2

Query: 140 TSKPKISQRMLTYLLCSDVNLRKPHTFALWMRTLNLAMKITMT*GVHTEKISQNF 304
           TSK    + +   LL +  +L +P    LW  TL  A+++ +  G+H EK+++N+
Sbjct: 358 TSKTNRLEALQGLLLIAVYSLMRPTVPGLWY-TLGSAIRLCVDLGLHAEKLNKNY 411


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,011,566
Number of Sequences: 1657284
Number of extensions: 9453637
Number of successful extensions: 21125
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21120
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)