Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310D02f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.31 
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   2.2  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   3.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.7  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 249 AKFKVRIHNAKVCGFRRLTSEHSRYVSILWLIFGFEVFFDTF 124
           AKF   + N     +    SE + YVS+L L+F F  F   F
Sbjct: 113 AKFGKLLINLYTINYNFKESERNDYVSLLQLVFVFCYFIYLF 154


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -2

Query: 142 SLLRYFPLYRPTYETHLYRQTAKPSLVIYF 53
           S+   +P   P YE   Y++  KP  +  F
Sbjct: 275 SMYYQYPFGLPEYEYSFYQEVKKPKKITDF 304


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 415 MSHNKQSPYXETTLQNNMSWYYYQ 486
           +SHNKQ  + E T + +    Y++
Sbjct: 88  LSHNKQQMWKELTAKYDPDGIYFE 111


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin
          deacetylase 2B protein.
          Length = 528

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +2

Query: 59 NNKRWLCCLTI 91
          N   WLCCL +
Sbjct: 3  NKTYWLCCLLL 13


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin
          deacetylase 2A protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +2

Query: 59 NNKRWLCCLTI 91
          N   WLCCL +
Sbjct: 3  NKTYWLCCLLL 13


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -2

Query: 286 FCMHPLCHSYFHC 248
           F  H LC  Y+ C
Sbjct: 482 FMPHELCDKYYRC 494


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,710
Number of Sequences: 336
Number of extensions: 2935
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)