BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS310D02f (521 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB... 29 5.1 AY069628-1|AAL39773.1| 478|Drosophila melanogaster LD39967p pro... 28 8.8 AE014296-1224|AAF50582.1| 478|Drosophila melanogaster CG8602-PA... 28 8.8 >AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB, isoform B protein. Length = 2693 Score = 28.7 bits (61), Expect = 5.1 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = +2 Query: 137 KTSKPKISQRMLTYLLCSDVNLRKPHTFAL 226 K P++ +R+ T LCSDV R P TFAL Sbjct: 112 KCRYPQVVKRLST--LCSDVIARHPQTFAL 139 >AY069628-1|AAL39773.1| 478|Drosophila melanogaster LD39967p protein. Length = 478 Score = 27.9 bits (59), Expect = 8.8 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -3 Query: 309 KPKFWLIFSVCTPYVIVIF 253 KP FW++ +C Y + IF Sbjct: 270 KPPFWMVSIICVAYYVAIF 288 >AE014296-1224|AAF50582.1| 478|Drosophila melanogaster CG8602-PA protein. Length = 478 Score = 27.9 bits (59), Expect = 8.8 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -3 Query: 309 KPKFWLIFSVCTPYVIVIF 253 KP FW++ +C Y + IF Sbjct: 270 KPPFWMVSIICVAYYVAIF 288 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,208,644 Number of Sequences: 53049 Number of extensions: 462279 Number of successful extensions: 1145 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1131 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1145 length of database: 24,988,368 effective HSP length: 80 effective length of database: 20,744,448 effective search space used: 1929233664 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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