Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310D01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118769-1|AAM50629.1|  414|Drosophila melanogaster GH11066p pro...    31   0.95 
AE014297-3783|AAF56455.2|  414|Drosophila melanogaster CG10560-P...    31   0.95 
BT010247-1|AAQ23565.1| 1508|Drosophila melanogaster RE40452p pro...    28   8.8  
AJ312135-1|CAC39164.1| 1531|Drosophila melanogaster turtle prote...    28   8.8  
AJ312134-1|CAC39163.1|  903|Drosophila melanogaster turtle prote...    28   8.8  
AJ312133-1|CAC39162.1|  749|Drosophila melanogaster turtle prote...    28   8.8  
AE014134-717|AAF51030.3|  903|Drosophila melanogaster CG15427-PC...    28   8.8  
AE014134-716|AAN11173.1|  902|Drosophila melanogaster CG15427-PE...    28   8.8  
AE014134-715|AAF51029.3| 1508|Drosophila melanogaster CG15427-PD...    28   8.8  

>AY118769-1|AAM50629.1|  414|Drosophila melanogaster GH11066p
           protein.
          Length = 414

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
 Frame = +3

Query: 345 TWIDAITWSSGLIIGWYTSQLI-HIKYKYHSNQYQKKCPTLSHIVNSLRPY----FICSI 509
           T +D  T      + +Y S+L+ H+K       Y KK PTL  I N+L  Y    FICSI
Sbjct: 304 TSLDIKTEKFDYFVWFYHSELVKHLKLL----NYSKKLPTLRSIRNALNKYSGWAFICSI 359

Query: 510 N 512
           +
Sbjct: 360 S 360


>AE014297-3783|AAF56455.2|  414|Drosophila melanogaster CG10560-PA
           protein.
          Length = 414

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
 Frame = +3

Query: 345 TWIDAITWSSGLIIGWYTSQLI-HIKYKYHSNQYQKKCPTLSHIVNSLRPY----FICSI 509
           T +D  T      + +Y S+L+ H+K       Y KK PTL  I N+L  Y    FICSI
Sbjct: 304 TSLDIKTEKFDYFVWFYHSELVKHLKLL----NYSKKLPTLRSIRNALNKYSGWAFICSI 359

Query: 510 N 512
           +
Sbjct: 360 S 360


>BT010247-1|AAQ23565.1| 1508|Drosophila melanogaster RE40452p
           protein.
          Length = 1508

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -1

Query: 443 ILITVVFVFYMNQLTCVPANY*STAPCNGINPSSVLKIPSFAVCP 309
           +L T V   +  Q  C P N   TA  +G+    V K P+F V P
Sbjct: 498 LLFTRVNEEHQGQYACTPYNAQGTAGASGVMDVLVRKPPAFTVEP 542


>AJ312135-1|CAC39164.1| 1531|Drosophila melanogaster turtle protein,
           isoform 4 protein.
          Length = 1531

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -1

Query: 443 ILITVVFVFYMNQLTCVPANY*STAPCNGINPSSVLKIPSFAVCP 309
           +L T V   +  Q  C P N   TA  +G+    V K P+F V P
Sbjct: 498 LLFTRVNEEHQGQYACTPYNAQGTAGASGVMDVLVRKPPAFTVEP 542


>AJ312134-1|CAC39163.1|  903|Drosophila melanogaster turtle protein,
           isoform 3 protein.
          Length = 903

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -1

Query: 443 ILITVVFVFYMNQLTCVPANY*STAPCNGINPSSVLKIPSFAVCP 309
           +L T V   +  Q  C P N   TA  +G+    V K P+F V P
Sbjct: 498 LLFTRVNEEHQGQYACTPYNAQGTAGASGVMDVLVRKPPAFTVEP 542


>AJ312133-1|CAC39162.1|  749|Drosophila melanogaster turtle protein,
           isoform 2 protein.
          Length = 749

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -1

Query: 443 ILITVVFVFYMNQLTCVPANY*STAPCNGINPSSVLKIPSFAVCP 309
           +L T V   +  Q  C P N   TA  +G+    V K P+F V P
Sbjct: 498 LLFTRVNEEHQGQYACTPYNAQGTAGASGVMDVLVRKPPAFTVEP 542


>AE014134-717|AAF51030.3|  903|Drosophila melanogaster CG15427-PC,
           isoform C protein.
          Length = 903

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -1

Query: 443 ILITVVFVFYMNQLTCVPANY*STAPCNGINPSSVLKIPSFAVCP 309
           +L T V   +  Q  C P N   TA  +G+    V K P+F V P
Sbjct: 498 LLFTRVNEEHQGQYACTPYNAQGTAGASGVMDVLVRKPPAFTVEP 542


>AE014134-716|AAN11173.1|  902|Drosophila melanogaster CG15427-PE,
           isoform E protein.
          Length = 902

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -1

Query: 443 ILITVVFVFYMNQLTCVPANY*STAPCNGINPSSVLKIPSFAVCP 309
           +L T V   +  Q  C P N   TA  +G+    V K P+F V P
Sbjct: 498 LLFTRVNEEHQGQYACTPYNAQGTAGASGVMDVLVRKPPAFTVEP 542


>AE014134-715|AAF51029.3| 1508|Drosophila melanogaster CG15427-PD,
           isoform D protein.
          Length = 1508

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -1

Query: 443 ILITVVFVFYMNQLTCVPANY*STAPCNGINPSSVLKIPSFAVCP 309
           +L T V   +  Q  C P N   TA  +G+    V K P+F V P
Sbjct: 498 LLFTRVNEEHQGQYACTPYNAQGTAGASGVMDVLVRKPPAFTVEP 542


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,725,559
Number of Sequences: 53049
Number of extensions: 440547
Number of successful extensions: 1329
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)