Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310C06f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    24   0.71 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   3.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   3.8  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   6.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   8.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.7  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   8.7  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   8.7  

>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -3

Query: 171 CPW*KNSFGLLAHLCATGSDRKRPGFCAVARTDNAATKATTNHACIL 31
           C   K+ FG   +  ++ S+ K  G C + + +  A KA     C+L
Sbjct: 22  CEGCKSFFGRTYNNISSISECKNNGECVINKKNRTACKACRLRKCLL 68


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 15/56 (26%), Positives = 20/56 (35%)
 Frame = +3

Query: 129 INVLTDQRNSFTKDTTTSTAVTFPS*PTGK*TGWTDATFAVNTAWTSSLWRPRKKT 296
           IN+L    NS++    T +    P       T   D +  V T      W P K T
Sbjct: 387 INILYANMNSYSVPEPTISTTPRPEWARPPSTPSADGSKPVQTTPKPGQWVPEKST 442


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 147 GLLAHLCATGSDRKRPGFC 91
           G L ++C    D  RPG C
Sbjct: 251 GTLGYICEINVDDCRPGAC 269


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +3

Query: 78  FSRPHRSPVVSCRFPLRINVLTDQRNSF 161
           FSR     + +  F +R+N + +  N F
Sbjct: 131 FSRFSNDVIATAAFGIRVNSVQEPNNEF 158


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 298  IVFFLGLHRDEVHAVFTANV 239
            +VF L L++D++H  +   V
Sbjct: 1282 VVFLLQLNKDQIHVKWPLGV 1301


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 298  IVFFLGLHRDEVHAVFTANV 239
            +VF L L++D++H  +   V
Sbjct: 1282 VVFLLQLNKDQIHVKWPLGV 1301


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 259 HGPRLYGDP 285
           HGP +YG P
Sbjct: 156 HGPLMYGQP 164


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +3

Query: 363 SKYLGPLV*FYVLIIKIKIYFITL 434
           +KY   ++ FY+ +  I +Y+ +L
Sbjct: 319 NKYCNFIILFYLSVFVILVYYASL 342


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +3

Query: 390 FYVLIIKIKIYFITLFGRCSFIALT 464
           FY  +  +  Y +  FG   FI ++
Sbjct: 112 FYYPVATMSFYVLNFFGSIQFIIIS 136


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +2

Query: 137 ANRPKEFFYQGHN 175
           AN+ ++F+Y+G N
Sbjct: 350 ANKIRDFYYEGPN 362


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,982
Number of Sequences: 336
Number of extensions: 2458
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)