Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310C06f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42843-4|AAA83595.1|  178|Caenorhabditis elegans Hypothetical pr...    32   0.29 
Z93374-5|CAB07557.1|  935|Caenorhabditis elegans Hypothetical pr...    30   0.87 
Z81506-1|CAB04128.1|  555|Caenorhabditis elegans Hypothetical pr...    30   0.87 
AF016686-15|AAB66231.3|  572|Caenorhabditis elegans C-type lecti...    30   0.87 
U64836-4|AAG24059.1|  417|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U21324-18|AAA62570.2|  419|Caenorhabditis elegans C-type lectin ...    30   1.2  
AF077540-5|AAC26308.1|  417|Caenorhabditis elegans C-type lectin...    30   1.2  
AL110484-4|CAB54396.2|  425|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF016686-7|AAB66241.2|  664|Caenorhabditis elegans C-type lectin...    28   3.5  
AF025450-9|AAB70938.2|  409|Caenorhabditis elegans C-type lectin...    28   4.7  
AF025452-1|AAB70944.1|  411|Caenorhabditis elegans C-type lectin...    27   6.2  
AL023821-1|CAA19438.2|  355|Caenorhabditis elegans Hypothetical ...    27   8.1  

>U42843-4|AAA83595.1|  178|Caenorhabditis elegans Hypothetical
           protein T19E7.1 protein.
          Length = 178

 Score = 31.9 bits (69), Expect = 0.29
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +2

Query: 182 YSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKL 313
           Y  H  ++    V W+   N+CR     LVS++ + EN  + KL
Sbjct: 57  YEDHWYKMFETDVMWIPAENVCRSMGGHLVSIKDESENLFVHKL 100


>Z93374-5|CAB07557.1|  935|Caenorhabditis elegans Hypothetical
           protein C06C6.7 protein.
          Length = 935

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -2

Query: 187 AVEVVVSLVKEFLWSVSTFMRNGKRQETTGLLCGRENRQRSYES 56
           AV  +VS+ K     + TF+RNG+  +    + G   +QR +ES
Sbjct: 608 AVGALVSITKVSRSELETFVRNGESTQKIADIYGTPEQQRQFES 651


>Z81506-1|CAB04128.1|  555|Caenorhabditis elegans Hypothetical
           protein F16H6.1 protein.
          Length = 555

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +2

Query: 182 YSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKL 313
           Y+G+    +   +   D ++ C++ C +LVS+ + EENN +  L
Sbjct: 172 YNGNCYYPSQSALSEQDAQSACQQECGNLVSIHSDEENNFVQSL 215


>AF016686-15|AAB66231.3|  572|Caenorhabditis elegans C-type lectin
           protein 43 protein.
          Length = 572

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +2

Query: 182 YSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQS 325
           Y+G    +    +D  D R +C+    DLVS+ +Q EN  +  L+  +
Sbjct: 331 YNGFCYSVNTNLLDEPDARQVCQRVSGDLVSIHSQAENLFLQSLVNST 378


>U64836-4|AAG24059.1|  417|Caenorhabditis elegans Hypothetical
           protein F10G2.3 protein.
          Length = 417

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +2

Query: 176 YFYSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQSES 331
           Y Y+G+  +    +  ++  +N C ++C DL ++ T  EN  I  + Q   S
Sbjct: 163 YNYNGYCYDYY-AEASFVVAQNTCEQFCGDLATIHTANENRYILTVAQHYPS 213


>U21324-18|AAA62570.2|  419|Caenorhabditis elegans C-type lectin
           protein 5 protein.
          Length = 419

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = +2

Query: 176 YFYSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLI 316
           Y Y+GH   L   +  ++  + IC + C +L S+ +  EN  +  ++
Sbjct: 161 YNYNGHCFTLHTERNTFVQAQAICEQECGNLASIHSSNENRYLSSIM 207


>AF077540-5|AAC26308.1|  417|Caenorhabditis elegans C-type lectin
           protein 20 protein.
          Length = 417

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +2

Query: 170 HNYFYSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEEN---NLIFKLIQQSE 328
           HNY  S ++P +A+    ++  +  C E C  LVS+ +  EN   N++     Q+E
Sbjct: 156 HNYNGSCYIPHVAS---SFIRAQRTCEEECGSLVSIHSANENRYFNILASTFAQNE 208


>AL110484-4|CAB54396.2|  425|Caenorhabditis elegans Hypothetical
           protein Y38E10A.5 protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +2

Query: 176 YFYSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLI 304
           Y Y+G      N    +  G+ IC + C +L S+ +  EN  I
Sbjct: 164 YNYNGFCYTFHNTASTYTKGQKICEQECGNLASIHSANENRYI 206


>AF016686-7|AAB66241.2|  664|Caenorhabditis elegans C-type lectin
           protein 44 protein.
          Length = 664

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 230 DGRNICREYCMDLVSMETQEENNLIFKLIQQS 325
           D R  C     DLVS+ +Q EN+ I  LI  +
Sbjct: 280 DAREFCLSLSEDLVSIHSQAENDFIQSLISNT 311


>AF025450-9|AAB70938.2|  409|Caenorhabditis elegans C-type lectin
           protein 3 protein.
          Length = 409

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/52 (23%), Positives = 24/52 (46%)
 Frame = +2

Query: 176 YFYSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQSES 331
           Y Y+ +    ++ +  +   + IC E C +LVS+ +  EN  +  +     S
Sbjct: 154 YNYNNYCYTFSHNQSSFTTAQAICEEECGNLVSIHSANENRYLMNIASHRAS 205


>AF025452-1|AAB70944.1|  411|Caenorhabditis elegans C-type lectin
           protein 2 protein.
          Length = 411

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = +2

Query: 158 FYQGHNYFYSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKL 313
           +Y  +NY Y+ H          +   + IC E C +LVS+ +  EN  +  +
Sbjct: 155 YYNYNNYCYTFH-----RDLYSFTTAQTICEEECGNLVSIHSANENRYVMTI 201


>AL023821-1|CAA19438.2|  355|Caenorhabditis elegans Hypothetical
           protein Y102A5B.2 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 230 DGRNICREYCMDLVSMETQEENNLIFKL 313
           D + IC+  C +LVS+ +  EN  I  L
Sbjct: 252 DAQEICKTRCANLVSISSANENRFIRSL 279


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,618,861
Number of Sequences: 27780
Number of extensions: 231139
Number of successful extensions: 673
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)