Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310C03f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   1.6  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   1.6  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   2.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.7  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   8.7  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = +1

Query: 130 ISVGTDLNNIWKLYFPSDEKGSNETVAKHINSFKLYINKNRNLFDLEKIDQTHSV 294
           I++  D N +  L F  DEK S   +   +N+F   I +    F L K     +V
Sbjct: 265 IALNDDYNRLCHLCFLLDEKLSYIILTSFLNNFYFIIFQVFESFYLHKATTLETV 319


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 137 LERILTTYGNCTFRPMKKDPMK 202
           LER  T YGN  +R  +  P+K
Sbjct: 10  LERFCT-YGNVNYRQRRSQPLK 30


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 41  IRASTTLQHPQGSLVLLGLQEHQ 109
           ++ + T   PQG LVL  + ++Q
Sbjct: 124 VKLTNTCSPPQGQLVLSSMHKYQ 146


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 42  FEPQQHFNIRKGH*YCWV 95
           FEP +   + +G+ +CWV
Sbjct: 477 FEPWREKCVVEGNPHCWV 494


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 321 ILQVLHIQWYAVSLIYFFQIEQVPILVYI*LETI 220
           I+ V + + YAV    F+    V  L+Y  LE +
Sbjct: 135 IMGVAYYEQYAVEFFQFYAQFIVYFLIYAVLEML 168


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 428 QFKVSCKQYSSVDNVV 381
           + K  C    SVDN+V
Sbjct: 272 EVKAECSDLDSVDNIV 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.132    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,418
Number of Sequences: 336
Number of extensions: 2439
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)