Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310C03f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-2088|AAF55231.2| 885|Drosophila melanogaster CG31293-P... 52 4e-07
AB120948-1|BAC92705.1| 755|Drosophila melanogaster mini chromos... 52 4e-07
AB120946-1|BAC92703.1| 755|Drosophila melanogaster mini chromos... 52 4e-07
AB120944-1|BAC92701.1| 296|Drosophila melanogaster mini chromos... 52 4e-07
BT011137-1|AAR82804.1| 890|Drosophila melanogaster GM13293p pro... 50 1e-06
AB120941-1|BAC92698.1| 885|Drosophila melanogaster mini chromos... 50 1e-06
AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA... 30 2.2
AY095073-1|AAM11401.1| 184|Drosophila melanogaster RE21703p pro... 28 6.7
AE014298-2220|AAO41659.1| 1812|Drosophila melanogaster CG33173-P... 28 6.7
BT024937-1|ABE01167.1| 575|Drosophila melanogaster IP16068p pro... 28 8.8
AY129450-1|AAM76192.1| 979|Drosophila melanogaster LD36241p pro... 28 8.8
AY113456-1|AAM29461.1| 616|Drosophila melanogaster RE36204p pro... 28 8.8
AY058622-1|AAL13851.1| 977|Drosophila melanogaster LD31525p pro... 28 8.8
AY058442-1|AAL13671.1| 463|Drosophila melanogaster GH22459p pro... 28 8.8
AJ011925-1|CAA09870.1| 2285|Drosophila melanogaster Kakapo protein. 28 8.8
AJ011924-1|CAA09869.1| 2396|Drosophila melanogaster Kakapo protein. 28 8.8
AF200425-1|AAF24343.1| 5201|Drosophila melanogaster Short stop/K... 28 8.8
AF200422-1|AAF24340.1| 638|Drosophila melanogaster Short stop/K... 28 8.8
AE014298-2067|AAF48395.1| 616|Drosophila melanogaster CG9522-PA... 28 8.8
AE014296-1278|AAF50545.3| 1166|Drosophila melanogaster CG7546-PB... 28 8.8
AE014296-1277|AAF50546.2| 1332|Drosophila melanogaster CG7546-PA... 28 8.8
AE014296-1274|AAF50549.2| 463|Drosophila melanogaster CG4321-PA... 28 8.8
AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-P... 28 8.8
AE013599-1791|AAM68562.1| 5160|Drosophila melanogaster CG18076-P... 28 8.8
AE013599-1790|AAF58319.3| 5501|Drosophila melanogaster CG18076-P... 28 8.8
AE013599-1789|AAM68561.1| 5201|Drosophila melanogaster CG18076-P... 28 8.8
AE013599-1788|AAG22268.2| 5390|Drosophila melanogaster CG18076-P... 28 8.8
AE013599-1787|AAF58317.1| 5385|Drosophila melanogaster CG18076-P... 28 8.8
>AE014297-2088|AAF55231.2| 885|Drosophila melanogaster CG31293-PA
protein.
Length = 885
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/85 (28%), Positives = 42/85 (49%)
Frame = +1
Query: 160 WKLYFPSDEKGSNETVAKHINSFKLYINKNRNLFDLEKIDQTHSVPLDVQNLQNDDEFIQ 339
W+LYF ++ +A I + + Y +N + FD I PL +++D + +
Sbjct: 115 WRLYFLREKYEEGNELATRIMAVEAYYQRNPHTFDFVMIRDRGFFPLCAAGIKSDAQLKE 174
Query: 340 EWSSFTTDLFENPVTTLSTLEYCLH 414
W S + D+ E+P+ TL TL +H
Sbjct: 175 VWPSLSEDIREHPLRTLGTLSLAMH 199
>AB120948-1|BAC92705.1| 755|Drosophila melanogaster mini chromosome
maintenance-relatedprotein protein.
Length = 755
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/85 (28%), Positives = 42/85 (49%)
Frame = +1
Query: 160 WKLYFPSDEKGSNETVAKHINSFKLYINKNRNLFDLEKIDQTHSVPLDVQNLQNDDEFIQ 339
W+LYF ++ +A I + + Y +N + FD I PL +++D + +
Sbjct: 115 WRLYFLREKYEEGNELATRIMAVEAYYQRNPHTFDFVMIRDRGFFPLCAAGIKSDAQLKE 174
Query: 340 EWSSFTTDLFENPVTTLSTLEYCLH 414
W S + D+ E+P+ TL TL +H
Sbjct: 175 VWPSLSEDIREHPLRTLGTLSLAMH 199
>AB120946-1|BAC92703.1| 755|Drosophila melanogaster mini chromosome
maintenance-relatedprotein protein.
Length = 755
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/85 (28%), Positives = 42/85 (49%)
Frame = +1
Query: 160 WKLYFPSDEKGSNETVAKHINSFKLYINKNRNLFDLEKIDQTHSVPLDVQNLQNDDEFIQ 339
W+LYF ++ +A I + + Y +N + FD I PL +++D + +
Sbjct: 115 WRLYFLREKYEEGNELATRIMAVEAYYQRNPHTFDFVMIRDRGFFPLCAAGIKSDAQLKE 174
Query: 340 EWSSFTTDLFENPVTTLSTLEYCLH 414
W S + D+ E+P+ TL TL +H
Sbjct: 175 VWPSLSEDIREHPLRTLGTLSLAMH 199
>AB120944-1|BAC92701.1| 296|Drosophila melanogaster mini chromosome
maintenance-relatedprotein protein.
Length = 296
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/85 (28%), Positives = 42/85 (49%)
Frame = +1
Query: 160 WKLYFPSDEKGSNETVAKHINSFKLYINKNRNLFDLEKIDQTHSVPLDVQNLQNDDEFIQ 339
W+LYF ++ +A I + + Y +N + FD I PL +++D + +
Sbjct: 115 WRLYFLREKYEEGNELATRIMAVEAYYQRNPHTFDFVMIRDRGFFPLCAAGIKSDAQLKE 174
Query: 340 EWSSFTTDLFENPVTTLSTLEYCLH 414
W S + D+ E+P+ TL TL +H
Sbjct: 175 VWPSLSEDIREHPLRTLGTLSLAMH 199
>BT011137-1|AAR82804.1| 890|Drosophila melanogaster GM13293p
protein.
Length = 890
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/85 (27%), Positives = 42/85 (49%)
Frame = +1
Query: 160 WKLYFPSDEKGSNETVAKHINSFKLYINKNRNLFDLEKIDQTHSVPLDVQNLQNDDEFIQ 339
W+L+F ++ +A I + + Y +N + FD I PL +++D + +
Sbjct: 120 WRLHFLREKYEEGNELATRIMAVEAYYQRNPHTFDFVMIRDRGFFPLCAAGIKSDAQLKE 179
Query: 340 EWSSFTTDLFENPVTTLSTLEYCLH 414
W S + D+ E+P+ TL TL +H
Sbjct: 180 VWPSLSEDIREHPLRTLGTLSLAMH 204
>AB120941-1|BAC92698.1| 885|Drosophila melanogaster mini chromosome
maintenance-relatedprotein protein.
Length = 885
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/85 (27%), Positives = 42/85 (49%)
Frame = +1
Query: 160 WKLYFPSDEKGSNETVAKHINSFKLYINKNRNLFDLEKIDQTHSVPLDVQNLQNDDEFIQ 339
W+L+F ++ +A I + + Y +N + FD I PL +++D + +
Sbjct: 115 WRLHFLREKYEEGNELATRIMAVEAYYQRNPHTFDFVMIRDRGFFPLCAAGIKSDAQLKE 174
Query: 340 EWSSFTTDLFENPVTTLSTLEYCLH 414
W S + D+ E+P+ TL TL +H
Sbjct: 175 VWPSLSEDIREHPLRTLGTLSLAMH 199
>AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA
protein.
Length = 4498
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 193 SNETVAKHINSFK--LYINKNRNLFDLEKIDQTHSVPLDVQNLQNDDE 330
SN TVA +IN FK Y NKN+ + I + D N ++DD+
Sbjct: 3111 SNSTVANYINRFKSNSYTNKNKPVTVTANIKADSTDDKDNDNDEDDDD 3158
>AY095073-1|AAM11401.1| 184|Drosophila melanogaster RE21703p
protein.
Length = 184
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 226 FKLYINKNRNLFDLEKIDQTHSVPLDVQNLQNDDEFIQEWSSFTTDLFENPVT 384
F++ NK+ NLF T P+ + + +F + SS TT LF + T
Sbjct: 78 FRIGFNKSVNLFGPTSATSTTERPVTHHTTEVNTDFTPDESSRTTQLFYSTTT 130
>AE014298-2220|AAO41659.1| 1812|Drosophila melanogaster CG33173-PA
protein.
Length = 1812
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 275 IFSKSNKFLFLFIYSLKLLICLATVSLDPFSSDGKYNFHMLLRSVPT 135
IF+ F F FI+S+ LL S DG+YN+ L+ +PT
Sbjct: 964 IFASCLSFCFCFIWSIPLLHMT-------LSRDGRYNYVELIAGMPT 1003
>BT024937-1|ABE01167.1| 575|Drosophila melanogaster IP16068p
protein.
Length = 575
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 82 STAGSSRAPANQLPIVISVGTDLNNIWKLYFPSD 183
+ +GS+ +PA++LP VI VG++ W + FP+D
Sbjct: 416 TASGSNSSPADELPAVI-VGSE---PWHMSFPND 445
>AY129450-1|AAM76192.1| 979|Drosophila melanogaster LD36241p
protein.
Length = 979
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 82 STAGSSRAPANQLPIVISVGTDLNNIWKLYFPSD 183
+ +GS+ +PA++LP VI VG++ W + FP+D
Sbjct: 820 TASGSNSSPADELPAVI-VGSE---PWHMSFPND 849
>AY113456-1|AAM29461.1| 616|Drosophila melanogaster RE36204p
protein.
Length = 616
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Frame = +1
Query: 247 NRNLFDLEKIDQTH-SVPLDVQNL-QNDDEFIQ-----EWSSFTTDLFENPVTTLSTLEY 405
NRN + +ID + S P DV+NL + E ++ + T L + PV E+
Sbjct: 473 NRNPLEWPRIDPKYFSAPSDVENLLEGIKEALRISKMPAMQAIGTRLLDKPVPGCENYEF 532
Query: 406 CLHETLNCAVKLKVRILNHQ 465
+ C+++ L+HQ
Sbjct: 533 ASDDYWRCSIRTLSYTLHHQ 552
>AY058622-1|AAL13851.1| 977|Drosophila melanogaster LD31525p
protein.
Length = 977
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 82 STAGSSRAPANQLPIVISVGTDLNNIWKLYFPSD 183
+ +GS+ +PA++LP VI VG++ W + FP+D
Sbjct: 818 TASGSNSSPADELPAVI-VGSE---PWHMSFPND 847
>AY058442-1|AAL13671.1| 463|Drosophila melanogaster GH22459p
protein.
Length = 463
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 322 DDEFIQEWSSFTTDLFENPVTTLSTLEYCLHE 417
+DE +E +F +FE TT S L +CLHE
Sbjct: 254 NDEIREEVDTF---MFEGHDTTTSALSFCLHE 282
>AJ011925-1|CAA09870.1| 2285|Drosophila melanogaster Kakapo protein.
Length = 2285
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 337 QEWSSFTTDLFENPVTTLSTLEYCLHET 420
Q W+ T+ N V LS L+Y +HET
Sbjct: 476 QRWAQLRTNFHTNLVQKLSGLKYPVHET 503
>AJ011924-1|CAA09869.1| 2396|Drosophila melanogaster Kakapo protein.
Length = 2396
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 337 QEWSSFTTDLFENPVTTLSTLEYCLHET 420
Q W+ T+ N V LS L+Y +HET
Sbjct: 587 QRWAQLRTNFHTNLVQKLSGLKYPVHET 614
>AF200425-1|AAF24343.1| 5201|Drosophila melanogaster Short
stop/Kakapo long isoform protein.
Length = 5201
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 337 QEWSSFTTDLFENPVTTLSTLEYCLHET 420
Q W+ T+ N V LS L+Y +HET
Sbjct: 587 QRWAQLRTNFHTNLVQKLSGLKYPVHET 614
>AF200422-1|AAF24340.1| 638|Drosophila melanogaster Short
stop/Kakapo isoform C protein.
Length = 638
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 337 QEWSSFTTDLFENPVTTLSTLEYCLHET 420
Q W+ T+ N V LS L+Y +HET
Sbjct: 546 QRWAQLRTNFHTNLVQKLSGLKYPVHET 573
>AE014298-2067|AAF48395.1| 616|Drosophila melanogaster CG9522-PA
protein.
Length = 616
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Frame = +1
Query: 247 NRNLFDLEKIDQTH-SVPLDVQNL-QNDDEFIQ-----EWSSFTTDLFENPVTTLSTLEY 405
NRN + +ID + S P DV+NL + E ++ + T L + PV E+
Sbjct: 473 NRNPLEWPRIDPKYFSAPSDVENLLEGIKEALRISKMPAMQAIGTRLLDKPVPGCENYEF 532
Query: 406 CLHETLNCAVKLKVRILNHQ 465
+ C+++ L+HQ
Sbjct: 533 ASDDYWRCSIRTLSYTLHHQ 552
>AE014296-1278|AAF50545.3| 1166|Drosophila melanogaster CG7546-PB,
isoform B protein.
Length = 1166
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 82 STAGSSRAPANQLPIVISVGTDLNNIWKLYFPSD 183
+ +GS+ +PA++LP VI VG++ W + FP+D
Sbjct: 1007 TASGSNSSPADELPAVI-VGSE---PWHMSFPND 1036
>AE014296-1277|AAF50546.2| 1332|Drosophila melanogaster CG7546-PA,
isoform A protein.
Length = 1332
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 82 STAGSSRAPANQLPIVISVGTDLNNIWKLYFPSD 183
+ +GS+ +PA++LP VI VG++ W + FP+D
Sbjct: 1173 TASGSNSSPADELPAVI-VGSE---PWHMSFPND 1202
>AE014296-1274|AAF50549.2| 463|Drosophila melanogaster CG4321-PA
protein.
Length = 463
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 322 DDEFIQEWSSFTTDLFENPVTTLSTLEYCLHE 417
+DE +E +F +FE TT S L +CLHE
Sbjct: 254 NDEIREEVDTF---MFEGHDTTTSALSFCLHE 282
>AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-PH,
isoform H protein.
Length = 8805
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 337 QEWSSFTTDLFENPVTTLSTLEYCLHET 420
Q W+ T+ N V LS L+Y +HET
Sbjct: 546 QRWAQLRTNFHTNLVQKLSGLKYPVHET 573
>AE013599-1791|AAM68562.1| 5160|Drosophila melanogaster CG18076-PC,
isoform C protein.
Length = 5160
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 337 QEWSSFTTDLFENPVTTLSTLEYCLHET 420
Q W+ T+ N V LS L+Y +HET
Sbjct: 546 QRWAQLRTNFHTNLVQKLSGLKYPVHET 573
>AE013599-1790|AAF58319.3| 5501|Drosophila melanogaster CG18076-PA,
isoform A protein.
Length = 5501
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 337 QEWSSFTTDLFENPVTTLSTLEYCLHET 420
Q W+ T+ N V LS L+Y +HET
Sbjct: 587 QRWAQLRTNFHTNLVQKLSGLKYPVHET 614
>AE013599-1789|AAM68561.1| 5201|Drosophila melanogaster CG18076-PE,
isoform E protein.
Length = 5201
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 337 QEWSSFTTDLFENPVTTLSTLEYCLHET 420
Q W+ T+ N V LS L+Y +HET
Sbjct: 587 QRWAQLRTNFHTNLVQKLSGLKYPVHET 614
>AE013599-1788|AAG22268.2| 5390|Drosophila melanogaster CG18076-PB,
isoform B protein.
Length = 5390
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 337 QEWSSFTTDLFENPVTTLSTLEYCLHET 420
Q W+ T+ N V LS L+Y +HET
Sbjct: 476 QRWAQLRTNFHTNLVQKLSGLKYPVHET 503
>AE013599-1787|AAF58317.1| 5385|Drosophila melanogaster CG18076-PG,
isoform G protein.
Length = 5385
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 337 QEWSSFTTDLFENPVTTLSTLEYCLHET 420
Q W+ T+ N V LS L+Y +HET
Sbjct: 476 QRWAQLRTNFHTNLVQKLSGLKYPVHET 503
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.316 0.132 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,862,756
Number of Sequences: 53049
Number of extensions: 413976
Number of successful extensions: 1075
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -