Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310C02f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 31 0.56
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 31 0.56
08_02_0885 + 22268287-22268988 31 0.74
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494... 31 0.74
02_01_0567 - 4168164-4168250,4168672-4168828,4168951-4169090,417... 30 0.98
03_05_0209 + 22014556-22015308 30 1.3
08_01_0651 + 5622786-5624165,5624720-5624881,5624984-5625173,562... 29 1.7
11_06_0610 - 25449085-25453284 29 2.3
11_02_0037 - 7613632-7613727,7614452-7615507 29 2.3
09_04_0076 + 14350020-14350164,14351020-14351129,14351436-143516... 29 2.3
07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733 29 2.3
01_06_1431 + 37317248-37317907 29 3.0
05_03_0458 + 14280953-14281866,14281964-14282912 28 4.0
05_02_0078 - 6386278-6386291,6386462-6386594,6386721-6388613,639... 28 4.0
01_01_0699 + 5405178-5405356,5405478-5405693,5405808-5405919,540... 28 4.0
11_06_0690 + 26303733-26306540 28 5.2
09_04_0670 + 19348468-19348949,19351594-19351724,19352433-19353238 28 5.2
08_02_0824 + 21561699-21562415,21563294-21563362,21563424-215634... 27 6.9
08_01_0910 + 8968896-8968932,8969111-8969181,8970417-8970740,897... 27 6.9
08_01_0650 + 5617578-5618633,5619580-5619735,5619816-5620058 27 6.9
07_03_0094 + 13335281-13335412,13337125-13337208,13337517-13338323 27 6.9
06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499 27 6.9
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 27 6.9
05_07_0100 + 27679280-27680320 27 6.9
05_03_0441 - 14037497-14038006,14038208-14038369 27 6.9
05_01_0245 - 1829921-1830359,1830449-1831002,1832016-1832144,183... 27 6.9
04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412 27 6.9
02_05_0827 - 32051086-32051445 27 6.9
02_02_0264 + 8404879-8405106 27 6.9
01_01_0917 + 7238721-7239078,7239590-7239957 27 6.9
10_08_0583 - 18952168-18952263,18953663-18953740,18954006-189540... 27 9.1
07_01_0017 - 114497-114547,114700-114816,114917-114997,115312-11... 27 9.1
04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,807... 27 9.1
02_01_0083 - 566201-567127,567223-567464,567623-567880,568173-56... 27 9.1
01_06_1439 + 37374739-37375473 27 9.1
01_06_0258 + 27950196-27950749,27953670-27954570 27 9.1
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 31.1 bits (67), Expect = 0.56
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +1
Query: 337 TGASARTLPSPAARCIPPPRLRTGLRGNI---AAQDPVIVHGHV-AFQTS 474
T A PSP PPP G+ G + A P +V G+V +F TS
Sbjct: 285 TAAGVVAAPSPVTSLAPPPATAVGVSGGVRAPAEPPPAVVMGNVMSFSTS 334
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 31.1 bits (67), Expect = 0.56
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 292 GKRVR*R--VPSGPQLSTGASARTLPSPAARCIPPPRLRTG-LRGNIA 426
G+R R R + PQ + G+ A L + R PPPRLRT L G +A
Sbjct: 156 GRRSRPRRCLAGRPQATAGSPAARLAARRLRTSPPPRLRTSRLAGAVA 203
>08_02_0885 + 22268287-22268988
Length = 233
Score = 30.7 bits (66), Expect = 0.74
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 249 LTMTSGYLMERSALRKASSVTR--TVWPAAVHRCKRPNTPITSCTMHPSPPP 398
LTMT +M KA+ + T PA RC+RP+ +C M PP
Sbjct: 31 LTMTHNCVMYLKNKEKAAGSVKGKTAIPATPRRCRRPDGSNPACKMRWERPP 82
>03_05_0780 +
27646936-27647084,27647168-27647289,27649380-27649458,
27650346-27650427,27650483-27650600,27650695-27651050,
27651404-27652222,27652846-27653265,27653426-27653437
Length = 718
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 324 PAAVHRCKRPNTPITSC-TMHPSPPPANRSSGEYR 425
P HRC P+ +C T P+PP SS E R
Sbjct: 328 PRLTHRCSTTTQPLPTCGTPAPAPPAGQPSSAEDR 362
>02_01_0567 -
4168164-4168250,4168672-4168828,4168951-4169090,
4170318-4170456,4170562-4170830,4170914-4171000,
4171259-4171327,4171427-4171455,4171544-4171950,
4172906-4172977,4173150-4173221,4173299-4173370,
4173454-4173519,4173717-4173785,4173866-4173995,
4174846-4174975
Length = 664
Score = 30.3 bits (65), Expect = 0.98
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 8/98 (8%)
Frame = +3
Query: 210 VNFAVFSETVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHR--------CKRPNTPI 365
VNF + S + SL + G L + L+ + ++ P+A + P++P
Sbjct: 178 VNFDISSNNFSGSLPPSLGSLSSLTTLKDGNPFNTSIAPSASPSSTPTGSTPTQTPSSPS 237
Query: 366 TSCTMHPSPPPANRSSGEYRRSGPCHCSWTCRLSDKRV 479
+S T PS P+N S G R S + S R+
Sbjct: 238 SSGTPSPSSSPSNSSGGSTARDSSSPSSRKHKSSTLRI 275
>03_05_0209 + 22014556-22015308
Length = 250
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +3
Query: 180 ATLKLTASTWVNFAVFSETVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNT 359
A + L + + V + VFS T+ L ++M + AL S+ A +RC +
Sbjct: 36 ALISLVSPSSVEYTVFSSTLPAPLRALGSFVMSKKALFVLSNAIFLFLAADYYRCFFSLS 95
Query: 360 PITS 371
P TS
Sbjct: 96 PSTS 99
>08_01_0651 +
5622786-5624165,5624720-5624881,5624984-5625173,
5625253-5625284
Length = 587
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = +3
Query: 375 TMHPSPPPANRSSGEYRRSGPCHCS---WT 455
T PPP NR +R S PC C+ WT
Sbjct: 127 TSDRQPPPMNRRMRHHRASAPCPCADVLWT 156
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 316 PSGPQLSTGASARTLPSPAARCIPPPRLR 402
PS P+ S+ + ++LP PA +PPP ++
Sbjct: 1106 PSVPKASSPPTEKSLPPPATVSLPPPTVK 1134
>11_02_0037 - 7613632-7613727,7614452-7615507
Length = 383
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +2
Query: 248 PYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAPE-HSHHQLHDASLP 391
P+ + G + +G AY AR+ P P H HH H +P
Sbjct: 223 PHHHHKNGGGLLVAGGDPYGAAYAAARALPPPPPPPPHGHHHHHQIIMP 271
>09_04_0076 +
14350020-14350164,14351020-14351129,14351436-14351601,
14351740-14351840,14351960-14352032,14352111-14352252,
14353239-14353399,14354017-14354129,14354226-14354325,
14354580-14354676,14354798-14354849,14355074-14355175,
14355256-14355402,14355485-14355656,14355752-14355991,
14356565-14356621,14356853-14356942,14357089-14357284,
14358117-14358228,14358305-14358459,14359155-14360580,
14360663-14360857,14361214-14361684
Length = 1540
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = -2
Query: 346 LHLWTAAGQTVRVTELAFRSADLSIR*PEVIVRLVVTVSEKTAKFTQVEAVSFNVAHLKF 167
L+ T+ ++RVT RS D+ + P V L V++S+ +FTQ+ ++ + L+F
Sbjct: 749 LYQITSRFDSLRVTP---RSLDILAKGPPVCGDLAVSLSQAGPQFTQIMRCNYAIKALRF 805
Query: 166 RCA 158
A
Sbjct: 806 STA 808
>07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733
Length = 181
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 342 CKRPNTPITSCTMHPSPPPA 401
CK PI+ CT P+PPPA
Sbjct: 104 CKVQAPPISQCTAVPTPPPA 123
>01_06_1431 + 37317248-37317907
Length = 219
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 310 RVPSGPQLSTGASARTLPSPAARCIPPPRLRTGLRGNIAAQDPVI 444
R P P S+ +++ T SPAA PPRL + AA P I
Sbjct: 90 RSPFSPPPSSSSNSSTTASPAAAAAAPPRLIPTIPRPAAALAPHI 134
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 351 PNTPIT-SCTMHPSPPPANRSSGEYRRSGPCHCSWTCRLSDKRVFTPSPAQTPLK 512
P P T SC+ HP+PPP + S S + P+ AQTP +
Sbjct: 77 PLPPTTLSCSSHPTPPPPPSPTTSPSASSLPPVPTPRSASSSKCSAPTSAQTPTR 131
>05_02_0078 -
6386278-6386291,6386462-6386594,6386721-6388613,
6391153-6391239,6391691-6391765,6393982-6394327,
6394428-6394450
Length = 856
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -3
Query: 477 HACLKGDMSMNNDRVLSGDIPPKTCSQAGGRDASCSW*WECSGA 346
H + D S DR++S I +A GRD W E SGA
Sbjct: 288 HCNVYSDKSNEADRLVSAKISSHENKEASGRDIYDRWTSESSGA 331
>01_01_0699 +
5405178-5405356,5405478-5405693,5405808-5405919,
5406335-5406397,5406468-5406606,5406822-5406877,
5408088-5408161,5408270-5408417,5408505-5408678,
5408809-5408896,5408996-5409109,5409728-5409825,
5409927-5410017,5410440-5410534,5410672-5410825,
5410864-5410876,5411276-5411384
Length = 640
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 13/56 (23%)
Frame = +3
Query: 282 SALRKASSVTRTVWP-AAVHRCK-----RPNTPI-------TSCTMHPSPPPANRS 410
SA AS+ + + P AA H C+ RP +P+ + +MHPSPPP S
Sbjct: 7 SAPSHASAASSSPLPFAAAHPCRASWTPRPTSPLPPLSLLRATASMHPSPPPEGHS 62
>11_06_0690 + 26303733-26306540
Length = 935
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 325 PQLSTGASARTLPSPAARCIPPPRLRTGLRGNIAAQDPVIVH 450
P L T + + S A PPP LR L G + P+IV+
Sbjct: 707 PNLCTLDPEKEVESEAGIFEPPPALRAQLSGPVQCGSPLIVY 748
>09_04_0670 + 19348468-19348949,19351594-19351724,19352433-19353238
Length = 472
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 347 APEHSHHQLHDAS-LPPACEQVFGGISP 427
A H HHQ+ A L P +Q FGG SP
Sbjct: 375 AEHHHHHQIPMAQPLVPNLQQQFGGSSP 402
>08_02_0824 +
21561699-21562415,21563294-21563362,21563424-21563459,
21564533-21564600,21565259-21565277,21565662-21565763,
21566173-21566288,21566501-21566595,21568093-21568264,
21568413-21568493,21569732-21569801,21570106-21570132
Length = 523
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 316 PSGPQLSTGASARTLPSPAARCIPPPRL 399
P GP T +S+ +LPS R PPPRL
Sbjct: 4 PPGPAPGTSSSSSSLPSRRRR-RPPPRL 30
>08_01_0910 +
8968896-8968932,8969111-8969181,8970417-8970740,
8972878-8972934,8974578-8974641,8974749-8974810
Length = 204
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 327 AAVHRCKRPNTPITSCTMHPSP 392
A +HRC NTP+ C HP P
Sbjct: 4 AQLHRC---NTPVQGCYSHPMP 22
>08_01_0650 + 5617578-5618633,5619580-5619735,5619816-5620058
Length = 484
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -2
Query: 397 GGGEGCIVQLVMGVFGRLHLWTAAGQTVRVTELAFRSADLSIR*PEVIVRLVVTVSEK 224
GGGE + L V GR+ A Q VR + L+ R D+ P V +R +E+
Sbjct: 26 GGGEDRLSALPDAVLGRIVSHLKAWQAVRTSVLSKRWRDVWASAPRVDIRHPCACNER 83
>07_03_0094 + 13335281-13335412,13337125-13337208,13337517-13338323
Length = 340
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +3
Query: 243 TSLTMTS-GYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTMHP 386
T L MTS G ++ TVWPAA+ RP P T + P
Sbjct: 80 TLLRMTSSGAAAVNFTFHFHNNCPETVWPAALSSAGRPPFPTTGFALPP 128
>06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499
Length = 524
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +3
Query: 216 FAVFSETVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTMHPSPP 395
F +FS T S T +S SA+ +A++ T T NT S +P+PP
Sbjct: 77 FLLFSTTALYSSTSSSS----SSAVLRATTTTTTTTTTTT---TTTNTFTLSFQANPNPP 129
Query: 396 PANRSS 413
P+N S+
Sbjct: 130 PSNLSN 135
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +3
Query: 348 RPNTPITSCTMHPSPPPANR--SSGEYRRSG 434
RPN P+ P PPP N + E RR G
Sbjct: 574 RPNRPVGMAPFMPPPPPPNNRGTKREQRRPG 604
>05_07_0100 + 27679280-27680320
Length = 346
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 322 GPQLSTGASARTLPSPAARCIPPP 393
GP LS AS R PSP+ +PPP
Sbjct: 130 GPTLSASASKRPSPSPSP--VPPP 151
>05_03_0441 - 14037497-14038006,14038208-14038369
Length = 223
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/33 (57%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +1
Query: 331 LSTGASAR--TLPSPA-ARCIPPPRLRTGLRGN 420
LS GASA+ TLPSPA ARC P R RG+
Sbjct: 102 LSLGASAQATTLPSPALARCGTPRPRRPPPRGS 134
>05_01_0245 -
1829921-1830359,1830449-1831002,1832016-1832144,
1832249-1832339,1832646-1832758,1832836-1833079,
1833193-1833281,1833357-1833424,1833790-1833874,
1834038-1834190
Length = 654
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 351 PNTPITSCTMHPSPPPANRS-SGEYRRSGP 437
P P+ S HP PP + E++R+GP
Sbjct: 382 PEAPLASDMAHPPPPKTEKELVDEWKRAGP 411
>04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412
Length = 184
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 5/30 (16%)
Frame = +3
Query: 372 CTMHPSPPP-----ANRSSGEYRRSGPCHC 446
C HP PPP A + G S PCHC
Sbjct: 128 CDCHPKPPPPAPAPAKPACGCPAWSSPCHC 157
>02_05_0827 - 32051086-32051445
Length = 119
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 361 PSPAARCIPPPRLRTGLRGNIAA 429
P+ AARC P PRL G G AA
Sbjct: 78 PAAAARCPPDPRLSAGFGGWPAA 100
>02_02_0264 + 8404879-8405106
Length = 75
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +3
Query: 258 TSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTMHPSPPPANRSSGEYR 425
T+ + + + + T +V P A R P P +S + P+P P S EYR
Sbjct: 3 TNAHAFQTTTETARAQNTASVPPHAPSRTPYPPLPSSSSSSTPTPTPVLAVSREYR 58
>01_01_0917 + 7238721-7239078,7239590-7239957
Length = 241
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1
Query: 340 GASARTLPSPAARCIPPPRLRTG 408
G+S +L SP A PPP LRTG
Sbjct: 155 GSSIFSLKSPLAWTQPPPSLRTG 177
>10_08_0583 -
18952168-18952263,18953663-18953740,18954006-18954081,
18954687-18954735,18955271-18955469,18955761-18955799,
18955800-18956123
Length = 286
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 322 GPQLSTGASARTLPSPAARCIPPPRLRTGLRGNIAAQDP 438
G +++ AS R SPAA PPP +G AA++P
Sbjct: 141 GGLMASAASCRNNNSPAAAAAPPPPTS---QGKAAAKEP 176
>07_01_0017 -
114497-114547,114700-114816,114917-114997,115312-115371,
116029-116238,116412-116720,116790-117080
Length = 372
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +2
Query: 77 IIEKDVFAFRQPSNRIGVGSLYGLMVFCTSKL 172
++ +F QP +R+ + L+G++V C S +
Sbjct: 227 LVPSHIFQVNQPMHRLPLHVLHGIIVLCVSAI 258
>04_01_0617 -
8076624-8076971,8077761-8077883,8077965-8078035,
8078108-8078360,8078613-8078768,8078854-8079770,
8079858-8079927,8082310-8082416,8082722-8082755,
8083621-8083940,8084031-8084820,8084890-8085046,
8085647-8086068
Length = 1255
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 323 ARSCPQVQAPEHSHHQLHDASLPPACEQVFGGISPLRTLSL 445
A + P++ P S + +S P Q FGG +PLR L L
Sbjct: 113 AAAQPEMSWPRGSPPRCPSSSCPEPQRQEFGGGNPLRRLPL 153
>02_01_0083 -
566201-567127,567223-567464,567623-567880,568173-568298,
568420-568489
Length = 540
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 372 CTMHPSPPPANRSSGEYRRSGPCHC 446
CT HP P + SS S CHC
Sbjct: 39 CTAHPLGEPNSNSSLSSNCSSSCHC 63
>01_06_1439 + 37374739-37375473
Length = 244
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 318 VWPAAVHRCKRPNTPITSCTMHPSPPPANRS 410
VWP+ CK P T P PPP +R+
Sbjct: 34 VWPS----CKNPRTQSFRAATAPPPPPGSRT 60
>01_06_0258 + 27950196-27950749,27953670-27954570
Length = 484
Score = 27.1 bits (57), Expect = 9.1
Identities = 26/92 (28%), Positives = 38/92 (41%)
Frame = +3
Query: 126 VLAHCTVSWSSAHLNLRCATLKLTASTWVNFAVFSETVTTSLTMTSGYLMERSALRKASS 305
V+ CT S++ L L S ++FA S + S L++ A R A+S
Sbjct: 218 VVLGCTTSYNGQSFLASDGVLSLGYSN-ISFA--SRAASRFGGRFSYCLVDHLAPRNATS 274
Query: 306 VTRTVWPAAVHRCKRPNTPITSCTMHPSPPPA 401
T P +RP+ SC P+P PA
Sbjct: 275 YL-TFGPNPAFSSRRPSEGTASCKPAPAPTPA 305
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,546,988
Number of Sequences: 37544
Number of extensions: 377497
Number of successful extensions: 1805
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1791
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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