Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310B12f
         (488 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA ...    29   4.5  
BT016082-1|AAV36967.1|  568|Drosophila melanogaster LD47465p pro...    28   6.0  
AY070520-1|AAL47991.1|  507|Drosophila melanogaster GH23534p pro...    28   6.0  
AE014297-2300|AAX52959.1|  568|Drosophila melanogaster CG5201-PC...    28   6.0  
AE014297-2299|AAF55383.1|  568|Drosophila melanogaster CG5201-PB...    28   6.0  
AE014297-2298|AAN13728.1|  568|Drosophila melanogaster CG5201-PA...    28   6.0  
AE014296-1481|AAN12009.1|  804|Drosophila melanogaster CG32353-P...    28   6.0  
AB004232-1|BAA22841.1|  568|Drosophila melanogaster DAD polypept...    28   6.0  

>AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA
            protein.
          Length = 3166

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = +3

Query: 369  PEREPEKRLPHPXXQQARKLPLRDGSSDENNDTDL 473
            P + PEK+LP    Q++R+ P +D ++ +  + ++
Sbjct: 1214 PRQSPEKQLPKDVPQKSRQSPEKDLTNQQRREEEI 1248


>BT016082-1|AAV36967.1|  568|Drosophila melanogaster LD47465p
           protein.
          Length = 568

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +3

Query: 378 EPEKRLPHPXXQQARKLPLRDGSSDENNDTDLRAXSM 488
           +PE   P P  Q+++ L L+D   +E++  D ++ ++
Sbjct: 328 QPETESPTPPYQRSKMLRLKDADFEEDSQNDAKSAAL 364


>AY070520-1|AAL47991.1|  507|Drosophila melanogaster GH23534p
           protein.
          Length = 507

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +3

Query: 378 EPEKRLPHPXXQQARKLPLRDGSSDENNDTDLRAXSM 488
           +PE   P P  Q+++ L L+D   +E++  D ++ ++
Sbjct: 267 QPETESPTPPYQRSKMLRLKDADFEEDSQNDAKSAAL 303


>AE014297-2300|AAX52959.1|  568|Drosophila melanogaster CG5201-PC,
           isoform C protein.
          Length = 568

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +3

Query: 378 EPEKRLPHPXXQQARKLPLRDGSSDENNDTDLRAXSM 488
           +PE   P P  Q+++ L L+D   +E++  D ++ ++
Sbjct: 328 QPETESPTPPYQRSKMLRLKDADFEEDSQNDAKSAAL 364


>AE014297-2299|AAF55383.1|  568|Drosophila melanogaster CG5201-PB,
           isoform B protein.
          Length = 568

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +3

Query: 378 EPEKRLPHPXXQQARKLPLRDGSSDENNDTDLRAXSM 488
           +PE   P P  Q+++ L L+D   +E++  D ++ ++
Sbjct: 328 QPETESPTPPYQRSKMLRLKDADFEEDSQNDAKSAAL 364


>AE014297-2298|AAN13728.1|  568|Drosophila melanogaster CG5201-PA,
           isoform A protein.
          Length = 568

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +3

Query: 378 EPEKRLPHPXXQQARKLPLRDGSSDENNDTDLRAXSM 488
           +PE   P P  Q+++ L L+D   +E++  D ++ ++
Sbjct: 328 QPETESPTPPYQRSKMLRLKDADFEEDSQNDAKSAAL 364


>AE014296-1481|AAN12009.1|  804|Drosophila melanogaster CG32353-PA
           protein.
          Length = 804

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 245 VIQIHQN*RLRTRGPPSIGFDL 180
           ++QI  N +  TR PPSIG DL
Sbjct: 353 IVQIRDNIQAETRRPPSIGGDL 374


>AB004232-1|BAA22841.1|  568|Drosophila melanogaster DAD polypeptide
           protein.
          Length = 568

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +3

Query: 378 EPEKRLPHPXXQQARKLPLRDGSSDENNDTDLRAXSM 488
           +PE   P P  Q+++ L L+D   +E++  D ++ ++
Sbjct: 328 QPETESPTPPYQRSKMLRLKDADFEEDSQNDAKSAAL 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,269,302
Number of Sequences: 53049
Number of extensions: 420889
Number of successful extensions: 1170
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)