Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310B11f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   2.9  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   3.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 241 CLFVFYFFLIRMVFMGYTCR 300
           C++ FY  LI ++ + Y CR
Sbjct: 284 CIYYFYCALIILLCIYYFCR 303


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +3

Query: 354 NHHHHFLLHLEMSPHQPPADIA***LFQHH 443
           NHHHH   H+    H     +A     +HH
Sbjct: 321 NHHHHAGHHIHAQHHVVNHHVAANGSLKHH 350


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 128 AFTTRRSKMKRRQKNGNKK 72
           A  T  SK    QKNG+KK
Sbjct: 70  ALHTECSKCSETQKNGSKK 88


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 177 GQEKRKKEIWLLRKKRRLH 121
           G+E++ K   L R++R+LH
Sbjct: 521 GREEQAKYYELARRERQLH 539


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 177 GQEKRKKEIWLLRKKRRLH 121
           G+E++ K   L R++R+LH
Sbjct: 413 GREEQAKYYELARRERQLH 431


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,781
Number of Sequences: 336
Number of extensions: 1497
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)