Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310B11f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U78310-1|AAB61140.1| 588|Homo sapiens pescadillo protein. 33 0.46
CR456539-1|CAG30425.1| 583|Homo sapiens PES1 protein. 33 0.46
BC032489-1|AAH32489.1| 588|Homo sapiens pescadillo homolog 1, c... 33 0.46
BC011621-1|AAH11621.1| 728|Homo sapiens hook homolog 1 (Drosoph... 31 1.9
AL035416-6|CAI22779.1| 728|Homo sapiens hook homolog 1 (Drosoph... 31 1.9
AF044923-1|AAC09298.1| 728|Homo sapiens hook1 protein protein. 31 1.9
BC100973-1|AAI00974.1| 258|Homo sapiens similar to Williams-Beu... 31 3.2
BC017884-1|AAH17884.1| 134|Homo sapiens Unknown (protein for IM... 31 3.2
BC047898-1|AAH47898.1| 692|Homo sapiens PPP1R12A protein protein. 30 4.3
AF412027-1|AAM62309.1| 336|Homo sapiens Williams-Beuren syndrom... 30 4.3
BX119917-1|CAI39851.1| 569|Homo sapiens retrotransposon gag dom... 30 5.7
BC151224-1|AAI51225.1| 569|Homo sapiens RGAG4 protein protein. 30 5.7
AB082532-1|BAC02710.1| 689|Homo sapiens KIAA2001 protein protein. 30 5.7
AF242528-1|AAK29205.1| 1399|Homo sapiens zinc finger protein 291... 29 9.9
AB040887-1|BAA95978.1| 1265|Homo sapiens KIAA1454 protein protein. 29 9.9
>U78310-1|AAB61140.1| 588|Homo sapiens pescadillo protein.
Length = 588
Score = 33.5 bits (73), Expect = 0.46
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = -3
Query: 255 EDKQAFRLREKLVRKKHRNLYKSMKAGQEKRKKEIWLLRKKRRLHD 118
E+ +A RL +++K+ + LY+ + G+ ++ +E L +KR+ HD
Sbjct: 528 EESEAKRLAIMMMKKREKYLYQKIMFGKRRKIREANKLAEKRKAHD 573
>CR456539-1|CAG30425.1| 583|Homo sapiens PES1 protein.
Length = 583
Score = 33.5 bits (73), Expect = 0.46
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = -3
Query: 255 EDKQAFRLREKLVRKKHRNLYKSMKAGQEKRKKEIWLLRKKRRLHD 118
E+ +A RL +++K+ + LY+ + G+ ++ +E L +KR+ HD
Sbjct: 523 EESEAKRLAIMMMKKREKYLYQKIMFGKRRKIREANKLAEKRKAHD 568
>BC032489-1|AAH32489.1| 588|Homo sapiens pescadillo homolog 1,
containing BRCT domain (zebrafish) protein.
Length = 588
Score = 33.5 bits (73), Expect = 0.46
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = -3
Query: 255 EDKQAFRLREKLVRKKHRNLYKSMKAGQEKRKKEIWLLRKKRRLHD 118
E+ +A RL +++K+ + LY+ + G+ ++ +E L +KR+ HD
Sbjct: 528 EESEAKRLAIMMMKKREKYLYQKIMFGKRRKIREANKLAEKRKAHD 573
>BC011621-1|AAH11621.1| 728|Homo sapiens hook homolog 1
(Drosophila) protein.
Length = 728
Score = 31.5 bits (68), Expect = 1.9
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -3
Query: 267 QKEIEDKQAFRLREKLVRKKHRNLYKSMKAGQEKRKKEIWLLRKK 133
QK+ ED +A R K+ +K RN+ K++ EI LLRK+
Sbjct: 593 QKKDEDMKAMEERYKMYLEKARNVIKTLDPKLNPASAEIMLLRKQ 637
>AL035416-6|CAI22779.1| 728|Homo sapiens hook homolog 1
(Drosophila) protein.
Length = 728
Score = 31.5 bits (68), Expect = 1.9
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -3
Query: 267 QKEIEDKQAFRLREKLVRKKHRNLYKSMKAGQEKRKKEIWLLRKK 133
QK+ ED +A R K+ +K RN+ K++ EI LLRK+
Sbjct: 593 QKKDEDMKAMEERYKMYLEKARNVIKTLDPKLNPASAEIMLLRKQ 637
>AF044923-1|AAC09298.1| 728|Homo sapiens hook1 protein protein.
Length = 728
Score = 31.5 bits (68), Expect = 1.9
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -3
Query: 267 QKEIEDKQAFRLREKLVRKKHRNLYKSMKAGQEKRKKEIWLLRKK 133
QK+ ED +A R K+ +K RN+ K++ EI LLRK+
Sbjct: 593 QKKDEDMKAMEERYKMYLEKARNVIKTLDPKLNPASAEIMLLRKQ 637
>BC100973-1|AAI00974.1| 258|Homo sapiens similar to Williams-Beuren
syndrome critical region protein 19 protein.
Length = 258
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -3
Query: 237 RLREKLVRKKHRNLYKSMKAGQEKRKKEIWLLRKKRRLH 121
R R L+RK+ LY+SM + K + +I +L +KRR H
Sbjct: 184 RSRIPLLRKRRFQLYRSMNSRARKNRSQI-VLFQKRRFH 221
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 237 RLREKLVRKKHRNLYKSMKAGQEKRKKEIWLLRKKR 130
R R L+RK+ LY+S K + I LLRK+R
Sbjct: 159 RSRIPLLRKRRFQLYRSTNPRARKNRSRIPLLRKRR 194
>BC017884-1|AAH17884.1| 134|Homo sapiens Unknown (protein for
IMAGE:4295997) protein.
Length = 134
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -3
Query: 300 TTGVTHKDHPYQKEIEDKQAFRLREKLVRKKHRNLYKSMKAGQEKRKKEIWLLRKKRR 127
T GV K+HP ++E+E + + R K + K + A K +W +KK++
Sbjct: 73 TQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNALWEPKKKKK 130
>BC047898-1|AAH47898.1| 692|Homo sapiens PPP1R12A protein protein.
Length = 692
Score = 30.3 bits (65), Expect = 4.3
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 312 SMRVTTGVTHKD-HPYQKEIEDKQAFRLREKLVRKKHRNLYKSMKAGQEKRKKE 154
S R T GVT D +K I ++ R RE+ +KK + K K ++K+KK+
Sbjct: 633 SRRSTQGVTLTDLQEAEKTIGRSRSTRTREQKKKKKKKKKKKKKKKKKKKKKKK 686
>AF412027-1|AAM62309.1| 336|Homo sapiens Williams-Beuren syndrome
critical region protein 19 protein.
Length = 336
Score = 30.3 bits (65), Expect = 4.3
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 237 RLREKLVRKKHRNLYKSMKAGQEKRKKEIWLLRKKR 130
R R L+RK+ LY+SM K + I L+RK+R
Sbjct: 237 RSRIPLLRKRRFQLYRSMNPRARKNRSHIPLVRKRR 272
>BX119917-1|CAI39851.1| 569|Homo sapiens retrotransposon gag domain
containing 4 protein.
Length = 569
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -3
Query: 282 KDHPYQKEIEDKQA--FRLREKLVRKKHRNLYKSMKAGQEKRKKEIWLLRKK 133
+D Y E ED++A RL K RK+ R + MK +E+ K+ ++KK
Sbjct: 339 EDEEYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKK 390
>BC151224-1|AAI51225.1| 569|Homo sapiens RGAG4 protein protein.
Length = 569
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -3
Query: 282 KDHPYQKEIEDKQA--FRLREKLVRKKHRNLYKSMKAGQEKRKKEIWLLRKK 133
+D Y E ED++A RL K RK+ R + MK +E+ K+ ++KK
Sbjct: 339 EDEEYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKK 390
>AB082532-1|BAC02710.1| 689|Homo sapiens KIAA2001 protein protein.
Length = 689
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -3
Query: 282 KDHPYQKEIEDKQA--FRLREKLVRKKHRNLYKSMKAGQEKRKKEIWLLRKK 133
+D Y E ED++A RL K RK+ R + MK +E+ K+ ++KK
Sbjct: 459 EDEEYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKK 510
>AF242528-1|AAK29205.1| 1399|Homo sapiens zinc finger protein 291
protein.
Length = 1399
Score = 29.1 bits (62), Expect = 9.9
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = -3
Query: 267 QKEIEDKQ--AFRLREKLVRKKHRNLYKSMKAGQEKRKKEIWLLRKKRRL 124
+K+ E+KQ A +LREKL +K L K ++ ++ RK + LL ++RR+
Sbjct: 543 KKKHEEKQMKAQQLREKLREEKTLKLQKLLEREKDVRKWKEELLDQRRRM 592
>AB040887-1|BAA95978.1| 1265|Homo sapiens KIAA1454 protein protein.
Length = 1265
Score = 29.1 bits (62), Expect = 9.9
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = -3
Query: 267 QKEIEDKQ--AFRLREKLVRKKHRNLYKSMKAGQEKRKKEIWLLRKKRRL 124
+K+ E+KQ A +LREKL +K L K ++ ++ RK + LL ++RR+
Sbjct: 565 KKKHEEKQMKAQQLREKLREEKTLKLQKLLEREKDVRKWKEELLDQRRRM 614
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,642,410
Number of Sequences: 237096
Number of extensions: 736423
Number of successful extensions: 3124
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2925
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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