Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310B11f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069545-1|AAL39690.1|  627|Drosophila melanogaster LD27336p pro...    51   8e-07
AE014134-1680|AAF52800.1|  627|Drosophila melanogaster CG4364-PA...    51   8e-07
BT029293-1|ABK30930.1|  681|Drosophila melanogaster RT01152p pro...    30   1.7  
BT029292-1|ABK30929.1|  681|Drosophila melanogaster RT01151p pro...    30   1.7  
BT029291-1|ABK30928.1|  681|Drosophila melanogaster RT01150p pro...    30   1.7  
BT010123-1|AAQ22592.1|  489|Drosophila melanogaster AT19280p pro...    30   1.7  
AE014297-3156|AAF55998.2|  681|Drosophila melanogaster CG31160-P...    30   1.7  
Y11066-1|CAA71945.1|  750|Drosophila melanogaster klu protein.         29   2.9  
BT025225-1|ABF17916.1|  803|Drosophila melanogaster FI01015p pro...    29   2.9  
BT021253-1|AAX33401.1|  803|Drosophila melanogaster RE58581p pro...    29   2.9  
AY119098-1|AAM50958.1|  538|Drosophila melanogaster RE01138p pro...    29   2.9  
AF187980-1|AAG17034.1|  538|Drosophila melanogaster Partner of P...    29   2.9  
AE014296-1870|AAF50119.2|  803|Drosophila melanogaster CG12296-P...    29   2.9  
AE013599-3444|AAF46886.1|  538|Drosophila melanogaster CG9952-PA...    29   2.9  
AY069546-1|AAL39691.1|  429|Drosophila melanogaster LD27370p pro...    29   5.1  
AE014296-2473|AAF49667.2|  429|Drosophila melanogaster CG6854-PA...    29   5.1  
M73271-1|AAA28574.1|  906|Drosophila melanogaster glutamate rece...    28   6.7  
BT024389-1|ABC86451.1|  122|Drosophila melanogaster IP05464p pro...    28   6.7  
BT010006-1|AAQ22475.1|  907|Drosophila melanogaster RE27895p pro...    28   6.7  
AE014296-2379|AAF49745.1|  102|Drosophila melanogaster CG13482-P...    28   6.7  
AE014134-943|AAF52268.1|  907|Drosophila melanogaster CG6992-PI ...    28   6.7  
AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-P...    28   8.8  

>AY069545-1|AAL39690.1|  627|Drosophila melanogaster LD27336p
           protein.
          Length = 627

 Score = 51.2 bits (117), Expect = 8e-07
 Identities = 23/61 (37%), Positives = 38/61 (62%)
 Frame = -3

Query: 309 MRVTTGVTHKDHPYQKEIEDKQAFRLREKLVRKKHRNLYKSMKAGQEKRKKEIWLLRKKR 130
           M V +G  HK +  Q    +    RL+ ++V+ +HRNL++ +   ++ ++KE WLLRKKR
Sbjct: 534 MSVQSGKVHKVNKRQVHKAEVDEHRLQARMVKPRHRNLFRKLIREKQTKEKEEWLLRKKR 593

Query: 129 R 127
           R
Sbjct: 594 R 594


>AE014134-1680|AAF52800.1|  627|Drosophila melanogaster CG4364-PA
           protein.
          Length = 627

 Score = 51.2 bits (117), Expect = 8e-07
 Identities = 23/61 (37%), Positives = 38/61 (62%)
 Frame = -3

Query: 309 MRVTTGVTHKDHPYQKEIEDKQAFRLREKLVRKKHRNLYKSMKAGQEKRKKEIWLLRKKR 130
           M V +G  HK +  Q    +    RL+ ++V+ +HRNL++ +   ++ ++KE WLLRKKR
Sbjct: 534 MSVQSGKVHKVNKRQVHKAEVDEHRLQARMVKPRHRNLFRKLIREKQTKEKEEWLLRKKR 593

Query: 129 R 127
           R
Sbjct: 594 R 594


>BT029293-1|ABK30930.1|  681|Drosophila melanogaster RT01152p
           protein.
          Length = 681

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 345 QGPNHHHHFLLHLEMSPHQPP 407
           Q P HHH    H + SPH PP
Sbjct: 565 QTPTHHHQQQHHQQHSPHNPP 585


>BT029292-1|ABK30929.1|  681|Drosophila melanogaster RT01151p
           protein.
          Length = 681

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 345 QGPNHHHHFLLHLEMSPHQPP 407
           Q P HHH    H + SPH PP
Sbjct: 565 QTPTHHHQQQHHQQHSPHNPP 585


>BT029291-1|ABK30928.1|  681|Drosophila melanogaster RT01150p
           protein.
          Length = 681

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 345 QGPNHHHHFLLHLEMSPHQPP 407
           Q P HHH    H + SPH PP
Sbjct: 565 QTPTHHHQQQHHQQHSPHNPP 585


>BT010123-1|AAQ22592.1|  489|Drosophila melanogaster AT19280p
           protein.
          Length = 489

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 345 QGPNHHHHFLLHLEMSPHQPP 407
           Q P HHH    H + SPH PP
Sbjct: 368 QTPTHHHQQQHHQQHSPHNPP 388


>AE014297-3156|AAF55998.2|  681|Drosophila melanogaster CG31160-PA
           protein.
          Length = 681

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 345 QGPNHHHHFLLHLEMSPHQPP 407
           Q P HHH    H + SPH PP
Sbjct: 565 QTPTHHHQQQHHQQHSPHNPP 585


>Y11066-1|CAA71945.1|  750|Drosophila melanogaster klu protein.
          Length = 750

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/43 (41%), Positives = 19/43 (44%)
 Frame = +3

Query: 345 QGPNHHHHFLLHLEMSPHQPPADIA***LFQHHYLQSQAHFAP 473
           Q P HH H   HL + PH PPA       F HH  Q   H  P
Sbjct: 24  QPPQHHPH---HLPL-PHPPPAPPPQLLNFNHHQQQYLPHMYP 62


>BT025225-1|ABF17916.1|  803|Drosophila melanogaster FI01015p
           protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/43 (41%), Positives = 19/43 (44%)
 Frame = +3

Query: 345 QGPNHHHHFLLHLEMSPHQPPADIA***LFQHHYLQSQAHFAP 473
           Q P HH H   HL + PH PPA       F HH  Q   H  P
Sbjct: 24  QPPQHHPH---HLPL-PHPPPAPPPQLLNFNHHQQQYLPHMYP 62


>BT021253-1|AAX33401.1|  803|Drosophila melanogaster RE58581p
           protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/43 (41%), Positives = 19/43 (44%)
 Frame = +3

Query: 345 QGPNHHHHFLLHLEMSPHQPPADIA***LFQHHYLQSQAHFAP 473
           Q P HH H   HL + PH PPA       F HH  Q   H  P
Sbjct: 24  QPPQHHPH---HLPL-PHPPPAPPPQLLNFNHHQQQYLPHMYP 62


>AY119098-1|AAM50958.1|  538|Drosophila melanogaster RE01138p
           protein.
          Length = 538

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 345 QGPNHHHHFLLHLEMSPHQPP 407
           Q  +HHHH L H   SP  PP
Sbjct: 122 QHHHHHHHHLPHRPASPESPP 142


>AF187980-1|AAG17034.1|  538|Drosophila melanogaster Partner of
           Paired protein.
          Length = 538

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 345 QGPNHHHHFLLHLEMSPHQPP 407
           Q  +HHHH L H   SP  PP
Sbjct: 122 QHHHHHHHHLPHRPASPESPP 142


>AE014296-1870|AAF50119.2|  803|Drosophila melanogaster CG12296-PA
           protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/43 (41%), Positives = 19/43 (44%)
 Frame = +3

Query: 345 QGPNHHHHFLLHLEMSPHQPPADIA***LFQHHYLQSQAHFAP 473
           Q P HH H   HL + PH PPA       F HH  Q   H  P
Sbjct: 24  QPPQHHPH---HLPL-PHPPPAPPPQLLNFNHHQQQYLPHMYP 62


>AE013599-3444|AAF46886.1|  538|Drosophila melanogaster CG9952-PA
           protein.
          Length = 538

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 345 QGPNHHHHFLLHLEMSPHQPP 407
           Q  +HHHH L H   SP  PP
Sbjct: 122 QHHHHHHHHLPHRPASPESPP 142


>AY069546-1|AAL39691.1|  429|Drosophila melanogaster LD27370p
           protein.
          Length = 429

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 276 HPYQKEIEDKQAFRLREKLVRKKHRNLYK 190
           HPY K++   Q  R+R K+ +   + LYK
Sbjct: 394 HPYMKQLTAAQKLRIRTKIQKLIFKELYK 422


>AE014296-2473|AAF49667.2|  429|Drosophila melanogaster CG6854-PA,
           isoform A protein.
          Length = 429

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 276 HPYQKEIEDKQAFRLREKLVRKKHRNLYK 190
           HPY K++   Q  R+R K+ +   + LYK
Sbjct: 394 HPYMKQLTAAQKLRIRTKIQKLIFKELYK 422


>M73271-1|AAA28574.1|  906|Drosophila melanogaster glutamate
           receptor subunit protein.
          Length = 906

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -3

Query: 306 RVTTGVTHKDHPYQKEIEDKQAFRLREK 223
           +V T VTH + PY    ED + FR REK
Sbjct: 427 KVYTVVTHYEEPYFMMKEDHENFRGREK 454


>BT024389-1|ABC86451.1|  122|Drosophila melanogaster IP05464p
           protein.
          Length = 122

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +3

Query: 348 GPNHHHHFLLHLEMSPHQPPADIA***LFQHHYLQSQAHFAPPCLHH 488
           G +HHHH      +  + PP  +       HH+     H  PP  HH
Sbjct: 42  GGHHHHHHHPPPPVHHYHPPPPVH----HHHHHGPPMHHHGPPPHHH 84


>BT010006-1|AAQ22475.1|  907|Drosophila melanogaster RE27895p
           protein.
          Length = 907

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -3

Query: 306 RVTTGVTHKDHPYQKEIEDKQAFRLREK 223
           +V T VTH + PY    ED + FR REK
Sbjct: 427 KVYTVVTHYEEPYFMMKEDHENFRGREK 454


>AE014296-2379|AAF49745.1|  102|Drosophila melanogaster CG13482-PA
           protein.
          Length = 102

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +3

Query: 348 GPNHHHHFLLHLEMSPHQPPADIA***LFQHHYLQSQAHFAPPCLHH 488
           G +HHHH      +  + PP  +       HH+     H  PP  HH
Sbjct: 22  GGHHHHHHHPPPPVHHYHPPPPVH----HHHHHGPPMHHHGPPPHHH 64


>AE014134-943|AAF52268.1|  907|Drosophila melanogaster CG6992-PI
           protein.
          Length = 907

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -3

Query: 306 RVTTGVTHKDHPYQKEIEDKQAFRLREK 223
           +V T VTH + PY    ED + FR REK
Sbjct: 427 KVYTVVTHYEEPYFMMKEDHENFRGREK 454


>AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-PA
           protein.
          Length = 1168

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -3

Query: 282 KDHPYQKEIEDKQAFRLREKLVRKKHRNLYKSMKAGQEKRKKE 154
           K+   +KE E+K   + RE+ +++K R      K  +EK KKE
Sbjct: 592 KEEKLRKEREEKMREKEREEKIKEKERVEKIKEKEREEKLKKE 634


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,158,031
Number of Sequences: 53049
Number of extensions: 253789
Number of successful extensions: 1295
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)