Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310B08f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 278 5e-74
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 228 7e-59
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 204 7e-52
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 190 1e-47
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 178 7e-44
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 176 3e-43
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 162 4e-39
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 160 2e-38
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 159 3e-38
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 145 5e-34
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 142 4e-33
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 140 1e-32
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 124 2e-27
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 122 7e-27
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 120 3e-26
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 116 3e-25
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 115 6e-25
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 105 6e-22
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 104 1e-21
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 103 2e-21
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 101 8e-21
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 99 5e-20
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 99 5e-20
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 96 4e-19
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 95 1e-18
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 94 2e-18
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 94 2e-18
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 93 4e-18
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 91 2e-17
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 88 1e-16
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 83 3e-15
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 79 8e-14
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 72 9e-12
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 64 2e-09
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 62 7e-09
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 59 5e-08
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 49 7e-05
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 42 0.009
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 38 0.11
UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster ye... 36 0.74
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 35 1.3
UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22; Bacteri... 34 1.7
UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protei... 33 3.0
UniRef50_Q966K1 Cluster: Putative uncharacterized protein; n=1; ... 33 3.0
UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolyt... 33 5.2
UniRef50_Q4UCX9 Cluster: Glutamate-cysteine ligase, putative; n=... 33 5.2
UniRef50_Q1RK02 Cluster: Ankyrin repeat; n=2; Rickettsia bellii|... 32 6.9
UniRef50_A7TES6 Cluster: Putative uncharacterized protein; n=1; ... 32 6.9
UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2; ... 32 9.2
UniRef50_A2TQQ6 Cluster: Glucose-1-phosphate thymidylyltransfera... 32 9.2
UniRef50_Q7Q7P3 Cluster: DNA polymerase; n=6; Eukaryota|Rep: DNA... 32 9.2
UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3; ... 32 9.2
UniRef50_Q8TMD2 Cluster: Putative uncharacterized protein; n=3; ... 32 9.2
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 32 9.2
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 278 bits (682), Expect = 5e-74
Identities = 132/156 (84%), Positives = 144/156 (92%)
Frame = -3
Query: 516 RGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKM 337
RG LKR+FKHLA+D+ M + R LKVEKWFG+KKELAAVRTVCSH+ENMIKGVT GFQYKM
Sbjct: 31 RGTLKRSFKHLALDMYMPDKRTLKVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKM 90
Query: 336 RAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLE 157
RAVYAHFPINCVT+E N++IEIRNFLGEKYIRRV+MAPGVTVVNS QKDELI+EGN +E
Sbjct: 91 RAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIE 150
Query: 156 DVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 49
VS SAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV
Sbjct: 151 SVSGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 186
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 228 bits (557), Expect = 7e-59
Identities = 107/158 (67%), Positives = 132/158 (83%), Gaps = 2/158 (1%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRMVNPRL--LKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQ 346
PRG L+R+F H+ V++ ++ + L+V+KW+G++KELA VRT+CSHV+NMIKGVT GF+
Sbjct: 30 PRGTLRRDFNHINVELSLLGKKKKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFR 89
Query: 345 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 166
YKMR+VYAHFPIN V E S++EIRNFLGEKYIRRV+M PGV S QKDELI+EGN
Sbjct: 90 YKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGN 149
Query: 165 SLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 52
+E VS+SAALIQQ+TTVKNKDIRKFLDG+YVSEK TV
Sbjct: 150 DIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 204 bits (499), Expect = 7e-52
Identities = 96/160 (60%), Positives = 123/160 (76%), Gaps = 1/160 (0%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRMVNP-RLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQY 343
PRG L RNFKHL +D +++ R L+V+ WFG+++ +AA+RT SHV+N+I GVTKG++Y
Sbjct: 30 PRGKLTRNFKHLNLDFQLLEGGRKLQVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRY 89
Query: 342 KMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNS 163
KMR VYAHFPIN T N+ IEIRNFLGEK +R+V M GVT++ S K KDEL+++GN
Sbjct: 90 KMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGND 149
Query: 162 LEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 43
+E VS SAALI Q VKNKDIRKFLDG+YVS+K T+ D
Sbjct: 150 IELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTITED 189
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 190 bits (464), Expect = 1e-47
Identities = 81/156 (51%), Positives = 116/156 (74%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 340
PRG L ++F H +VDI +V + L V+ WFG++K++A ++T+ S +ENMI GVTKG++YK
Sbjct: 48 PRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSIIENMITGVTKGYEYK 107
Query: 339 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSL 160
MR VYAHFPIN T+G ++EIRNF GEK +RR+++ G+T + K KDE+++ GNSL
Sbjct: 108 MRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKDEIVLTGNSL 167
Query: 159 EDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 52
E +S S A IQ + +K KD+RKFLDG+YVSE+ +
Sbjct: 168 ELLSQSCATIQLRSAIKYKDVRKFLDGIYVSERNVL 203
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 178 bits (433), Expect = 7e-44
Identities = 86/156 (55%), Positives = 113/156 (72%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 340
PRG LK+N +H+ ++++ +K W GS+K A +R+V S + NMI GVT+GF+YK
Sbjct: 31 PRGTLKQNLRHVDIEMKKQG-NTIKFIVWHGSRKHNACIRSVYSIINNMIIGVTQGFRYK 89
Query: 339 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSL 160
MR VYAHFPIN TE +++EIRNFLGE+ R +K PGVTV S KDE+I+EGNSL
Sbjct: 90 MRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIILEGNSL 149
Query: 159 EDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 52
E+VS SAA I+Q V+NKDIRKFLDG+YVSE+ +
Sbjct: 150 ENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 176 bits (428), Expect = 3e-43
Identities = 89/161 (55%), Positives = 113/161 (70%), Gaps = 2/161 (1%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 340
PRG L +N KH+ V VN +L+KV G +K +AA+RTV S V+NMI GVTKG++YK
Sbjct: 30 PRGTLTKNLKHIDVTFTKVNNQLIKVAVHNGGRKHVAALRTVKSLVDNMITGVTKGYKYK 89
Query: 339 MRAVYAHFPINC--VTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 166
MR VYAHFPIN V +G IE+RNFLG+K IR V + GVT+ S KDE+++ GN
Sbjct: 90 MRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGN 149
Query: 165 SLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 43
S+EDVS +AA +QQ V+NKDIRKFLDG+YVS K + D
Sbjct: 150 SVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFITED 190
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 162 bits (394), Expect = 4e-39
Identities = 79/152 (51%), Positives = 98/152 (64%)
Frame = -3
Query: 516 RGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKM 337
+G L R+F H +DI N + V WF K A RT+CSH+ENM KGVT GF+YKM
Sbjct: 30 KGTLVRDFSHAPLDITHANDTI-SVAVWFPRGKRNALPRTICSHIENMFKGVTYGFEYKM 88
Query: 336 RAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLE 157
R YAHFPI + N IEIRNF+ + RR++ PGVT+ S KDELI+ G S+E
Sbjct: 89 RLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRRIECLPGVTIAMSTNVKDELILRGISIE 148
Query: 156 DVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 61
DVS +AA I +S V NKD+RKFLDG YVS +
Sbjct: 149 DVSHTAARIHESLKVPNKDLRKFLDGCYVSSR 180
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 160 bits (388), Expect = 2e-38
Identities = 78/157 (49%), Positives = 105/157 (66%), Gaps = 3/157 (1%)
Frame = -3
Query: 510 VLKRNFKHLAVDIRMVNP---RLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 340
V +++ KH+ +D R++ + +K W +K A +RT + V NMIKGVT GFQYK
Sbjct: 92 VSQQSLKHMNLDARIIKSPAGQKIKFVVWHAGRKHAACLRTAQACVANMIKGVTVGFQYK 151
Query: 339 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSL 160
MRAVYAHFPIN + EIRNFLGEK +R + M GVT+ QKD++++EGN +
Sbjct: 152 MRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQKDQVLVEGNDI 211
Query: 159 EDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 49
+ VS SAAL+ +T V+NKDIRKFLDG+Y + K TVV
Sbjct: 212 DLVSQSAALLHGATLVRNKDIRKFLDGIYCTGKDTVV 248
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 159 bits (387), Expect = 3e-38
Identities = 80/168 (47%), Positives = 111/168 (66%), Gaps = 9/168 (5%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKWFGSKKELAAVRTVCSHVENMIK 367
PRG L R F+H VDI + P+ ++ ++ W+G++++ A VRT+ SH++NMI
Sbjct: 31 PRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMWYGNRRDSAVVRTIASHIKNMIT 90
Query: 366 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 187
GVTKG+QYKMR VYAHFP+ V + I+++NFLGEK R ++M GV V KD
Sbjct: 91 GVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGEKRTRHIEMYDGVVV--KKLGKD 148
Query: 186 ELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 43
E+ +EGN +E VS SAA I + V+NKDIR+FLDG+YVSEK + D
Sbjct: 149 EICLEGNDVEKVSQSAANIHAANLVRNKDIRQFLDGVYVSEKCLIEND 196
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 145 bits (352), Expect = 5e-34
Identities = 76/163 (46%), Positives = 105/163 (64%), Gaps = 10/163 (6%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRM---VNPR------LLKVEKWFGSKKELAAVRTVCSHVENMIK 367
PRG L +NF+H A+DI++ VN + + V W +K+ V +V S + NMI+
Sbjct: 30 PRGELTKNFRHSALDIQVQKKVNKKNNVAKSRVSVRMWQSYRKQRCQVNSVASQIRNMIR 89
Query: 366 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVV-NSPKQK 190
GVT G+++KM YAHFPI +EI+NFLGEK IR +K PGVT+ N ++K
Sbjct: 90 GVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKNFLGEKIIRTIKCLPGVTITRNEAEEK 149
Query: 189 DELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 61
+ L ++GN L +VS + ALI Q+ VKNKDIR+FLDG+YVSEK
Sbjct: 150 NVLTLQGNDLNNVSLTCALIHQACAVKNKDIRQFLDGIYVSEK 192
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 142 bits (344), Expect = 4e-33
Identities = 69/152 (45%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
Frame = -3
Query: 513 GVLKRNFKHLAVDIRMVNPRL-LKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKM 337
G + R+F+ + IR + + + W KK+LA + T+ SH+ NMI GV+ GF+Y +
Sbjct: 32 GSIIRSFEKTQISIRYFEKKKEIILLLWMAGKKQLAKLNTIASHITNMIVGVSLGFEYIL 91
Query: 336 RAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLE 157
+ +YAHFPIN T+ S +EIRNFLGEK IR++ M GV + + +KDE+ + G+ L
Sbjct: 92 QPIYAHFPINLSITDDGSCLEIRNFLGEKRIRKIYMGQGVKIKKNEAKKDEISVFGSDLN 151
Query: 156 DVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 61
VS +AA IQQS KNKD+RKFLDG+Y+ K
Sbjct: 152 LVSLNAASIQQSCQAKNKDLRKFLDGIYIIMK 183
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 140 bits (340), Expect = 1e-32
Identities = 60/97 (61%), Positives = 77/97 (79%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 340
PRG LKR+F+HL +++ V L+V KWFG +KE+AA+RTVCSH++NMIKGVTKGF+YK
Sbjct: 30 PRGTLKRDFRHLHMEMERVGKNQLRVRKWFGVRKEIAAIRTVCSHIQNMIKGVTKGFRYK 89
Query: 339 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 229
MR+VYAHFPIN +G +EIRNFLGEK +R V +
Sbjct: 90 MRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 124 bits (298), Expect = 2e-27
Identities = 68/123 (55%), Positives = 85/123 (69%)
Frame = -3
Query: 420 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIR 241
KELA VRT+CSHV+NMIKGV+ GF+YK+R+VYAHFP+N V
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNVV-------------------- 69
Query: 240 RVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 61
+M GV S QKDELI+EGN E VS+SAALIQ++T V+N+DIRKF+DG+YVSEK
Sbjct: 70 --QMRTGVACSVSQAQKDELILEGNDTELVSNSAALIQKATAVENQDIRKFVDGIYVSEK 127
Query: 60 TTV 52
T+
Sbjct: 128 GTM 130
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 122 bits (293), Expect = 7e-27
Identities = 66/153 (43%), Positives = 99/153 (64%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 340
P+G L+R K+ V I + +++ + K F KK++A VRT +H+ NMIKGVT+GF+Y+
Sbjct: 31 PKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAIVRTFKAHINNMIKGVTEGFKYR 89
Query: 339 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSL 160
++ VY+HFP+ V +G+ ++ I NFLGEK RR K+ PGVTV + E+ +EG
Sbjct: 90 LKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKILPGVTV---KVKGSEIEVEGIDK 144
Query: 159 EDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 61
E V +AA I+Q+T + D R F DG+Y+ EK
Sbjct: 145 EAVGQTAANIEQATRITKWDRRVFQDGIYIVEK 177
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 120 bits (288), Expect = 3e-26
Identities = 66/153 (43%), Positives = 97/153 (63%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 340
P+G L+R F + I + ++ + K F +K++A RT +H+ NMIKGVT+GF YK
Sbjct: 31 PKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAIARTFAAHIRNMIKGVTEGFTYK 89
Query: 339 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSL 160
++ VY+HFPI+ V +G+ +I I NFLGEK R+ K+ PGVTV + E+I+EG
Sbjct: 90 LKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKILPGVTV---KVRGQEIIVEGIDK 144
Query: 159 EDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 61
E V +AA I+Q+T + D R F DG+Y+ EK
Sbjct: 145 EAVGQTAANIEQATRITKWDRRIFQDGIYIVEK 177
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 116 bits (279), Expect = 3e-25
Identities = 58/130 (44%), Positives = 80/130 (61%)
Frame = -3
Query: 450 LKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEI 271
+++ W G +K +A TV S + N IK VT GF Y M+AVY HF IN E I+ +
Sbjct: 72 IRIRLWNGKRKAMALAITVESLLRNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLV 131
Query: 270 RNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRK 91
+NFLGEK ++R +M G V ++KD ++IEG SL DVS SA I KN+D R
Sbjct: 132 KNFLGEKNVKRFRMR-GAARVRLDERKDTIVIEGPSLSDVSQSAGTITNECKAKNRDSRV 190
Query: 90 FLDGLYVSEK 61
FLDG++V+E+
Sbjct: 191 FLDGIFVTER 200
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 115 bits (277), Expect = 6e-25
Identities = 62/148 (41%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Frame = -3
Query: 507 LKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRA 331
L ++ HL +D N + WFG++K LA + T+ V+NMI GVT G++YKM
Sbjct: 41 LVKDLSHLKLDFEYDENDHQIVARCWFGNRKLLARIGTLFGIVKNMITGVTLGWRYKMHF 100
Query: 330 VYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV-VNSPKQKDELIIEGNSLED 154
VY+HFPI +E + F+G K + V GV + N KDE+ IEG +LED
Sbjct: 101 VYSHFPIKHTCSEDGRTFDFNGFMGHKEHKIVTAPEGVRIWSNESVAKDEINIEGANLED 160
Query: 153 VSSSAALIQQSTTVKNKDIRKFLDGLYV 70
VS I Q T +K+KD+RKFLDG+YV
Sbjct: 161 VSLVCGQIHQLTKIKDKDLRKFLDGIYV 188
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 105 bits (252), Expect = 6e-22
Identities = 49/86 (56%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = -3
Query: 513 GVLKRNFKHLAVDIRMVNP-RLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKM 337
G L+R F+H+ VD+++V R + VE WFG K A +RTVCSH+ENMI GV + +QYK+
Sbjct: 94 GKLERTFRHIPVDMKLVEDGRKITVEMWFGLTKNKACIRTVCSHIENMITGVRQRYQYKL 153
Query: 336 RAVYAHFPINCVTTEGNSIIEIRNFL 259
R VYAHFPIN T S IEIRNFL
Sbjct: 154 RFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 104 bits (250), Expect = 1e-21
Identities = 59/153 (38%), Positives = 90/153 (58%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 340
P+G R K+ V I + + ++ +V KK A V T H+EN+I GV +GF+Y
Sbjct: 49 PKGENTRYLKYRGVFIEVGDGKV-RVYTTSPKKKHKAMVGTFAGHIENLITGVKEGFEYH 107
Query: 339 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSL 160
++ VYAHFPI V EGN +I I NF+GEK+ RR K+ V S + ++ + G +
Sbjct: 108 LKVVYAHFPIK-VRVEGNEVI-IENFIGEKHPRRAKIVGRAQVEISGQ---DIYVRGIDI 162
Query: 159 EDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 61
E+ +AA ++Q+T +K KD R F DG+Y+ +K
Sbjct: 163 EECGQTAANLEQATKIKRKDPRVFQDGIYIVKK 195
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 103 bits (248), Expect = 2e-21
Identities = 60/153 (39%), Positives = 91/153 (59%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 340
P+G L R+ + +D+ MV + V K+ LA T+ +H +NMI+GV G++Y+
Sbjct: 27 PKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAMTGTLEAHAKNMIRGVADGYEYR 85
Query: 339 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSL 160
M+ VY+HFPI + +GN +EI NFLGEK R K+ GVTV DE+ I G
Sbjct: 86 MKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKIIEGVTVKIG---NDEVTITGIDK 140
Query: 159 EDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 61
E V ++AA I+ +T + +D R F DG+Y++E+
Sbjct: 141 EKVGNTAANIEHATRITKRDPRVFQDGIYITER 173
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 101 bits (243), Expect = 8e-21
Identities = 61/152 (40%), Positives = 93/152 (61%), Gaps = 1/152 (0%)
Frame = -3
Query: 513 GVLKRNFKHLAVDIRMVNPRL-LKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKM 337
G ++F+ + V IR+ + LK E K++LA + T S V N+ +GV G+ K+
Sbjct: 17 GSAHKSFRKIPVGIRIDGSSVVLKAEGT--RKRDLAILNTARSIVRNLCEGVGVGYTIKL 74
Query: 336 RAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLE 157
+ VYAHFPI + +G I+ + NF GE+ R+ K+ G VV+ + +++I+ G+ L
Sbjct: 75 KVVYAHFPIT-IKQDGAMIL-VENFQGERSARKAKIVGGTKVVS---KGEDVIVTGHVLT 129
Query: 156 DVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 61
DVS +AA ++Q T VKNKD R FLDG+YV EK
Sbjct: 130 DVSQTAANLEQGTKVKNKDHRVFLDGVYVYEK 161
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 99.1 bits (236), Expect = 5e-20
Identities = 51/160 (31%), Positives = 99/160 (61%), Gaps = 1/160 (0%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQY 343
P+G + ++F + A IR+ +N + +E F +++ A + ++ +H++NMI G G++Y
Sbjct: 33 PKGEVIKDFSY-AKGIRIQLNEGKIILETTFADRRKKALLYSIIAHIKNMITGTINGYRY 91
Query: 342 KMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNS 163
++ + HFPI+ V G+ +++ N +GEK IRR K+ PGV V + +++++EG+
Sbjct: 92 YLKVISTHFPIS-VKVSGDE-VQVSNLIGEKNIRRAKILPGVKVT---VKGEDIVVEGSD 146
Query: 162 LEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 43
+ +V+ +AA I+ ST + D R F DG+Y+ +K + L+
Sbjct: 147 IYNVAQTAANIESSTKIVGYDRRIFSDGIYIYKKEVIGLE 186
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 99.1 bits (236), Expect = 5e-20
Identities = 59/153 (38%), Positives = 92/153 (60%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 340
P+G ++R F + + I + ++ V+ K++ A V T SH++N+I GV++GF+ K
Sbjct: 29 PKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVGTFASHLKNLIIGVSEGFECK 87
Query: 339 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSL 160
M VYAHFP+ V EG +++ I NFLGEK R K+ G T V +E+++ G +
Sbjct: 88 MNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKKPRIAKIL-GETKVK--VSGNEIVVSGINK 142
Query: 159 EDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 61
EDV +AA I+Q T +K D R F DG+Y+ +K
Sbjct: 143 EDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQK 175
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 96.3 bits (229), Expect = 4e-19
Identities = 50/148 (33%), Positives = 82/148 (55%)
Frame = -3
Query: 504 KRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVY 325
K N K++ + + + L V ++ +K A VRT+ S + NMI GV+KGF Y ++ VY
Sbjct: 37 KFNNKNVNIIYKKNDSNSLIVRCYYNNKSSSAIVRTITSIIYNMIIGVSKGFTYLLKIVY 96
Query: 324 AHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSS 145
+HFPI+ + + +EI N G K I + V V + K E+I+ +E +
Sbjct: 97 SHFPISVKYIQNENTLEITNLFGLKRIDSFFIPSSVQVCTNNLNKKEIILLSKDIETLGI 156
Query: 144 SAALIQQSTTVKNKDIRKFLDGLYVSEK 61
++LIQ ++ NKD R F+DG+Y++ K
Sbjct: 157 LSSLIQNKCSINNKDCRVFIDGIYLASK 184
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 94.7 bits (225), Expect = 1e-18
Identities = 54/158 (34%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 340
P+G ++R F H + + VN + +E +F +++E + T SH++NM++GV F Y+
Sbjct: 30 PKGEVERKFYHPLIKLS-VNDNKIILETYFATRREKRLINTWRSHIKNMLEGVQNPFVYR 88
Query: 339 MRAVYAHFPINCVTTEGNSIIEIRNFLGEK--YIRRVKMAPGVTV-VNSPKQKDELIIEG 169
++ Y HFP+ V EGN +I + NFLGEK I+ + V V + K + E+++E
Sbjct: 89 LKVCYTHFPMR-VKLEGNKLI-VENFLGEKAPIIKELPYLDKVKVKIEQNKDETEIVVES 146
Query: 168 NSLEDVSSSAALIQQSTTV--KNKDIRKFLDGLYVSEK 61
E A++I+QST K KD R+F DG+++ K
Sbjct: 147 PDKEKAGIVASMIEQSTRFLHKRKDRRRFTDGIWLYYK 184
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 93.9 bits (223), Expect = 2e-18
Identities = 55/153 (35%), Positives = 90/153 (58%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 340
P G +NF+++ V I + + ++ ++ K++ A + T S + N+ +G+ +G+ K
Sbjct: 33 PLGKTHKNFRNIPVKIEIADGKV-NLKTIGERKRDYAILHTARSIIRNICEGLVEGYTIK 91
Query: 339 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSL 160
M+ V+AHFPI V EG I+ I NF GE+ R + V+ PK +D +++ G
Sbjct: 92 MKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMGNTKVI--PKGED-VLLTGEVW 146
Query: 159 EDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 61
D++ +AA I+ +T VKNKD R FLDG+YV EK
Sbjct: 147 TDITQTAANIELTTKVKNKDHRVFLDGIYVYEK 179
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 93.9 bits (223), Expect = 2e-18
Identities = 55/151 (36%), Positives = 87/151 (57%)
Frame = -3
Query: 513 GVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMR 334
G + R + +D+ V+ + +E + K ++ + T SH+ENM GVT+G++Y M
Sbjct: 28 GSVTRRLWYPDIDVS-VDGDTVVIESDEDNAKTMSTIGTFQSHIENMFHGVTEGWEYGME 86
Query: 333 AVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLED 154
Y+HFP+ V EG+ ++ I NFLGEK RR + G T V +EL + G +E
Sbjct: 87 VFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRRTTI-HGDTDVEI--DGEELTVSGPDIEA 141
Query: 153 VSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 61
V +AA I+Q T + +KD+R F DG+Y++ K
Sbjct: 142 VGQTAADIEQLTRINDKDVRVFQDGVYITRK 172
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 93.1 bits (221), Expect = 4e-18
Identities = 56/140 (40%), Positives = 87/140 (62%), Gaps = 1/140 (0%)
Frame = -3
Query: 519 PRGVLKRNFKHLA-VDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQY 343
P G ++++F H + IR V + VE + +KK+ A V T+ S + NMI GVTKG++Y
Sbjct: 30 PLGKVEKDFSHARRISIR-VEGNSVVVETFHATKKDYALVGTIASIINNMIIGVTKGYRY 88
Query: 342 KMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNS 163
K++ VYAHFP++ + E + II I NFLGE+ R + PG V +KD++I+EG
Sbjct: 89 KLKIVYAHFPMS-LKVEKDKII-IENFLGERGKRIAGIMPGAKV---KIEKDDVIVEGID 143
Query: 162 LEDVSSSAALIQQSTTVKNK 103
L+ V+ +AA I +T ++ K
Sbjct: 144 LDAVAQTAANIHLATHLRGK 163
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 90.6 bits (215), Expect = 2e-17
Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 2/151 (1%)
Frame = -3
Query: 507 LKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAV 328
L R F+H +++R + L +V KKE A T +H+ NM +GV GF+YK++AV
Sbjct: 35 LTREFRHPRIEVRDSSGEL-EVFVNLPRKKEKALAGTWAAHLTNMARGVDSGFEYKLKAV 93
Query: 327 YAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP--GVTVVNSPKQKDELIIEGNSLED 154
Y+HFP+ + GN + + N GEK + RV P V + K ++ + G E
Sbjct: 94 YSHFPMT-IRVNGNQ-MTVTNLFGEK-VPRVAALPWSPAEVEVKVQNKTDVTVSGADREK 150
Query: 153 VSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 61
V +AA I++S +KN+D R F DG+Y+ K
Sbjct: 151 VGQTAANIERSCRIKNRDRRVFQDGIYIVSK 181
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 88.2 bits (209), Expect = 1e-16
Identities = 49/136 (36%), Positives = 81/136 (59%)
Frame = -3
Query: 468 MVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEG 289
+V +K+ K + +E V T S + NM+KG+ +GFQY+M+ Y+HFP+ V+ +G
Sbjct: 46 LVEDNKIKIVKSKNNSRERGIVGTWASEISNMVKGLKEGFQYEMKIDYSHFPMR-VSVKG 104
Query: 288 NSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVK 109
+++ I NF GE+ R ++ G T V+ + D L + G S +DV +AA I+++T +K
Sbjct: 105 KTVV-IENFFGERSPRTAEIV-GETQVS--VKGDRLFLNGPSKKDVGETAANIERATIIK 160
Query: 108 NKDIRKFLDGLYVSEK 61
D R F DG+Y+ K
Sbjct: 161 GFDPRVFQDGIYLISK 176
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 83.4 bits (197), Expect = 3e-15
Identities = 47/154 (30%), Positives = 88/154 (57%), Gaps = 1/154 (0%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 340
P+G + + F + V + + + ++ + ++++ A + + +++ENM KGVT+G +YK
Sbjct: 48 PKGEVTKEFYYPDVYLWVEDDEVV-IAATRSNRRQKAILGMIKAYIENMQKGVTEGHEYK 106
Query: 339 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA-PGVTVVNSPKQKDELIIEGNS 163
++ VY+HFP + + I NF+GE R ++ P T V Q ++I+ G
Sbjct: 107 LKLVYSHFPPEVKVDQKEGKVYIENFMGENVPRVAEIVDPENTEV--IVQGQDIIVRGID 164
Query: 162 LEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 61
E V +AA ++Q+T +K++D R F DG+Y+ EK
Sbjct: 165 KEAVGQTAANLEQATYIKDRDPRVFQDGIYIVEK 198
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 78.6 bits (185), Expect = 8e-14
Identities = 46/134 (34%), Positives = 80/134 (59%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 340
P G + + FK+ V + + + +++ +E + K+E A + T ++NM GVT+G++YK
Sbjct: 35 PLGEVTKEFKNTPVVMSLQDGKIV-MEVFKARKREYAILGTYKGILKNMFLGVTRGWRYK 93
Query: 339 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSL 160
++ +Y HFP+ V +GN ++ I NFLG K + + GV V K K++++IEG
Sbjct: 94 LKVIYTHFPM-LVKVQGNQLV-IENFLGRKSKITLNIPKGVKV--EVKGKEDIVIEGIDR 149
Query: 159 EDVSSSAALIQQST 118
E VS+ AA +Q +T
Sbjct: 150 ELVSTFAAAVQAAT 163
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 71.7 bits (168), Expect = 9e-12
Identities = 42/127 (33%), Positives = 70/127 (55%)
Frame = -3
Query: 450 LKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEI 271
+K+ +K V T S + +I+GVTKGF+Y M+ + HFP+ V+ G+ +I +
Sbjct: 52 VKIATSKNNKYTKGIVGTWYSETKLLIEGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-V 109
Query: 270 RNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRK 91
NFLGEK R K+ G V + D + I G + +AA I+++T +++ D R
Sbjct: 110 ENFLGEKSPRSAKIVDGCKV---SVKGDRITINGIDKRKIGETAANIERATYIRHFDARV 166
Query: 90 FLDGLYV 70
F DG+++
Sbjct: 167 FQDGIFL 173
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 64.1 bits (149), Expect = 2e-09
Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Frame = +1
Query: 49 HNSCFLRYIKTIQELSDILILDCSRLLNESSRARDIFQRVAFND*FILLFWRVNDSHTRC 228
+N R I TIQE +DIL+ D + LLN SS R+ FQ V N+ FILL R T
Sbjct: 21 NNGTSFRNINTIQEFTDILVSDTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFM 80
Query: 229 HLYPSDVFLTQEVTYLNN*ITL--SGDTVNGEVSIHSTHLVLEAFSYSFNHV 378
S+ F TQE++ N +T+ + VN E+ I+ +HLV FS + + V
Sbjct: 81 DFNFSNSFFTQEISNFNVILTIFFNNVNVNWEMRINKSHLVFVTFSDTSDQV 132
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 62.1 bits (144), Expect = 7e-09
Identities = 28/58 (48%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRMVNPRLLK--VEKWFGSKKELAAVRTVCSHVENMIKGVTKG 352
P+G L R+F H+ V++ ++ +L K V+KW+G++KELA V T+CS V+N IK VT G
Sbjct: 30 PQGSLHRDFNHINVELSLLGKKLKKFHVDKWWGNRKELATVHTICSPVQNTIKWVTLG 87
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 59.3 bits (137), Expect = 5e-08
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = -3
Query: 390 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 211
+H+++ + GF Y+MR+VYA FP N + E S+IE + +G+KYI RV++ V
Sbjct: 21 NHLQSCSEHDQGGFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRTSVAF 80
Query: 210 VNSPKQKDELI 178
S QK+EL+
Sbjct: 81 YASQAQKNELM 91
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 48.8 bits (111), Expect = 7e-05
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = -3
Query: 516 RGVLKRNFKHLAVDIRMVNPRL--LKVEKWFGSKKELAAVRTVCSHVENMIKGV 361
RG L+R+F H+ +++R++ R L+V+KW + K LA T+ SHV+NMIK V
Sbjct: 25 RGTLQRDFNHINIELRLLAKRKKQLQVDKWLKTMK-LATAHTIYSHVQNMIKRV 77
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 41.9 bits (94), Expect = 0.009
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 340
PRG+L RNFKH ++DI+ V+K KE+ + + +++++ + FQ K
Sbjct: 60 PRGILNRNFKHASLDIQ--------VQKEI---KEIKQIGLIKIEYQDVVQYSKQRFQVK 108
Query: 339 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSP-KQKDELIIEGNS 163
A +I+N IR + GV + ++K+ LI+ N
Sbjct: 109 SIAA-----------------QIKNM-----IRGI--TSGVVITRKEAEEKNVLILSAND 144
Query: 162 LEDVSSSAALIQQSTTVKNKDIR 94
L +VS + ALI Q+ VKNKDIR
Sbjct: 145 LNNVSLTCALIHQACAVKNKDIR 167
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 38.3 bits (85), Expect = 0.11
Identities = 34/131 (25%), Positives = 62/131 (47%)
Frame = -3
Query: 519 PRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 340
P+G L R F H ++I+ V +L V + K+ A T S + NM++GV+KGF+
Sbjct: 30 PKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKEHRALHGTTRSLLGNMVEGVSKGFERG 87
Query: 339 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSL 160
+ V + + GN ++ L Y V++ P + + +++++G
Sbjct: 88 LELVGVGYR---ASKSGNKLV-----LNVGYSHPVEIVPEEGIEIEVPSQTKVVVKGTDK 139
Query: 159 EDVSSSAALIQ 127
E V + AA I+
Sbjct: 140 ERVGAIAANIR 150
>UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster
yellows phytoplasma|Rep: 50S ribosomal protein L6 -
Aster yellows phytoplasma
Length = 175
Score = 35.5 bits (78), Expect = 0.74
Identities = 29/131 (22%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Frame = -3
Query: 516 RGVLKRNFKHLAVDIRMV-NPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 340
+G L + + + DI ++ N + V++ KK A + NMIKGV+ GF+ K
Sbjct: 35 KGPLGKLNQEIIGDINIIINHNNIIVKRKHNDKKNRALHGLYRMLIYNMIKGVSNGFKKK 94
Query: 339 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSL 160
+ + F N + N I+ + +G + +K+ +T+ + ++I++
Sbjct: 95 LELIGVGFRAN-INNNNNQILNLN--IGYSHNIMIKLPQSITLEVKMDKNPQIILKSYDK 151
Query: 159 EDVSSSAALIQ 127
+ + AA I+
Sbjct: 152 QLLGIVAAKIR 162
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 34.7 bits (76), Expect = 1.3
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -3
Query: 444 VEKWFGSKKELAAVR-TVCSHVENMIKGVTKGFQYKM 337
V K +K L A+R T SHV NMIKGVT+G++ ++
Sbjct: 60 VVKRSSDEKRLKALRGTFTSHVRNMIKGVTEGYKKEL 96
>UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22;
Bacteria|Rep: 50S ribosomal protein L6 -
Thermoanaerobacter tengcongensis
Length = 180
Score = 34.3 bits (75), Expect = 1.7
Identities = 32/131 (24%), Positives = 64/131 (48%)
Frame = -3
Query: 516 RGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKM 337
+G L++ F + V+I + + ++ K K+E A T + + NM+KGVT+GF+ +
Sbjct: 31 KGTLEKKFPPI-VNIEVRDGEVVVTRKG-DDKEERAMHGTTRAIIANMVKGVTEGFEKAL 88
Query: 336 RAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLE 157
V + +G + I N +G + ++ PG+ ++ + + +I+ G E
Sbjct: 89 EIVGVGYR---AAKQGKKL--ILN-VGYSHPVEIEEEPGIEII--VEGNNRIIVRGADKE 140
Query: 156 DVSSSAALIQQ 124
V AA I++
Sbjct: 141 RVGQVAANIRR 151
>UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protein;
n=1; Ralstonia solanacearum|Rep: Putative
surface-exposed adhesin protein - Ralstonia solanacearum
(Pseudomonas solanacearum)
Length = 1309
Score = 33.5 bits (73), Expect = 3.0
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -3
Query: 168 NSLEDVSSSAALIQQSTTVKNKDIRKFLDG 79
NS++ +SSSA+L+QQS K+ + K LDG
Sbjct: 150 NSIKSISSSASLVQQSAAGKDITVAKDLDG 179
>UniRef50_Q966K1 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 113
Score = 33.5 bits (73), Expect = 3.0
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +1
Query: 49 HNSCFLRYIKTIQELSDILILDCSRLLNESSRARDIFQR 165
+N+C LR IK + L+ +L + SRL N SR RD+F++
Sbjct: 25 NNNCKLRQIKPVPNLTRLL--EESRLTNSLSRLRDVFKK 61
>UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolytica
HM-1:IMSS|Rep: ankyrin - Entamoeba histolytica HM-1:IMSS
Length = 866
Score = 32.7 bits (71), Expect = 5.2
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = -3
Query: 498 NFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAH 319
+F LAVD ++N +L+K + ++K + T+ HV +K + G Y Y
Sbjct: 683 DFPELAVDDEILNKKLIKYNNEWNAQKRMEIFSTIVGHVGEHVKMI--GPFYCNFGRYIS 740
Query: 318 FPINCVTTEGNSIIE 274
NC+ +I+E
Sbjct: 741 IGDNCIINFNCTILE 755
>UniRef50_Q4UCX9 Cluster: Glutamate-cysteine ligase, putative; n=1;
Theileria annulata|Rep: Glutamate-cysteine ligase,
putative - Theileria annulata
Length = 795
Score = 32.7 bits (71), Expect = 5.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 216 TVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRK 91
TVV P + ++ G+S+ED + + +++TT KDI K
Sbjct: 76 TVVTGPTTTNSTVVPGSSMEDSTVPNTVTEENTTTTTKDIIK 117
>UniRef50_Q1RK02 Cluster: Ankyrin repeat; n=2; Rickettsia
bellii|Rep: Ankyrin repeat - Rickettsia bellii (strain
RML369-C)
Length = 629
Score = 32.3 bits (70), Expect = 6.9
Identities = 17/90 (18%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = -3
Query: 477 DIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPI-NCV 301
D R L+K + KK++ A + CS ++N + + + K+R + +PI
Sbjct: 508 DRRKAVESLVKYDNDLNKKKDITATLSYCSAIDNSFRAIDRNNLSKLRVLLDVYPILQEK 567
Query: 300 TTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 211
+G++++ + Y+ + + G+ +
Sbjct: 568 NNKGDTLLTAAVYKDNYYLAKYLVIRGIKI 597
>UniRef50_A7TES6 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 206
Score = 32.3 bits (70), Expect = 6.9
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = -3
Query: 234 KMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTT 55
K A G +V + ++KDE++I+G+ LE+V + + +KN + + +D +K T
Sbjct: 134 KFATGCSVSKNAEKKDEIVIQGDVLEEVEKYIHSLLEEKGLKNVKL-EIIDSQKKKKKPT 192
>UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2;
Candidatus Blochmannia|Rep: 50S ribosomal subunit
protein L6 - Blochmannia floridanus
Length = 181
Score = 31.9 bits (69), Expect = 9.2
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = -3
Query: 489 HLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAV 328
H + ++ N + L V + + A + T CS + +MI GVT+GF K++ +
Sbjct: 40 HNFIGVQFSNVKNLIVYSRYRNHVNRALLGTTCSLINSMIVGVTEGFVKKLQLI 93
>UniRef50_A2TQQ6 Cluster: Glucose-1-phosphate thymidylyltransferase;
n=11; Bacteroidetes|Rep: Glucose-1-phosphate
thymidylyltransferase - Dokdonia donghaensis MED134
Length = 339
Score = 31.9 bits (69), Expect = 9.2
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 4/122 (3%)
Frame = -3
Query: 393 CSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI-RRVKMAPGV 217
C + E I +K Q+ N V E ++IIE F+GE + + + PGV
Sbjct: 225 CGNKEVAIDTNSKMLQFLHDEKEEQLIANSVVNENSTIIE-PCFIGENVVLKNCTIGPGV 283
Query: 216 TVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDG---LYVSEKTTVVL 46
+ G ++ED + S +LIQQ + +KN + + G Y E T V L
Sbjct: 284 AIG-----------AGTTIEDSTISHSLIQQDSVIKNAQWTEAMIGNKVQYNGEHTRVSL 332
Query: 45 DD 40
D
Sbjct: 333 GD 334
>UniRef50_Q7Q7P3 Cluster: DNA polymerase; n=6; Eukaryota|Rep: DNA
polymerase - Anopheles gambiae str. PEST
Length = 2225
Score = 31.9 bits (69), Expect = 9.2
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 354 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKY 247
G +YK +YA + + +T +GNS+ E+ FLG+KY
Sbjct: 86 GSRYKTTVIYAPYLL-LITRDGNSL-EVAKFLGKKY 119
>UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 946
Score = 31.9 bits (69), Expect = 9.2
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 368 LIMFSTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTA 484
L +F+ C ++V+ A+S L P+H + R GF + TA
Sbjct: 22 LELFAACRESVVHVAASHLLPDHVAVTTRNGFVELIDTA 60
>UniRef50_Q8TMD2 Cluster: Putative uncharacterized protein; n=3;
Euryarchaeota|Rep: Putative uncharacterized protein -
Methanosarcina acetivorans
Length = 255
Score = 31.9 bits (69), Expect = 9.2
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = -3
Query: 288 NSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVK 109
+SI + NF +K+ R V + PGV V +S + KDE G DV + +Q T+
Sbjct: 51 SSIGQAENFSRKKFFRGVVLPPGVPVTSSGRIKDETGFPG----DVVIKDGIWKQGKTIF 106
Query: 108 N 106
N
Sbjct: 107 N 107
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 31.9 bits (69), Expect = 9.2
Identities = 28/96 (29%), Positives = 48/96 (50%)
Frame = -3
Query: 411 AAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVK 232
A T + + NM++GV GFQ K+ V + EG ++ +G + ++
Sbjct: 64 ALAGTARAVLANMVQGVHTGFQRKLVMVGVGYR---AKAEGK---KLNLTVGLSHPVNIE 117
Query: 231 MAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQ 124
M G+T V +P Q E+I++G + VS AA I++
Sbjct: 118 MPEGIT-VETPSQ-TEIIVKGADKQRVSQVAANIRE 151
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 493,541,163
Number of Sequences: 1657284
Number of extensions: 9431894
Number of successful extensions: 24655
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 24051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24622
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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