Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310B05f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    25   0.31 
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    24   0.71 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   3.8  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   3.8  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   3.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.8  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   5.0  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   5.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.7  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   8.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  

>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 289 IMRHTLYPKPDEWPKSEHTELNEDQYEADFNWEAKPNK 176
           IMRH +  K D W + E     E +Y   +  E K  K
Sbjct: 89  IMRHLIDHKRDWWNELEEKYDKEGEYRKKYEAEIKGKK 126


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = +1

Query: 247 WAIHLVLDITYVSLYYQGHIQRT-HQQLDSILHALSQNLFLHMPEASIPDPC 399
           W   +V  + Y + Y  G  +      +++  HA+ Q+L   M    +P PC
Sbjct: 285 WNDWIVAPLGYDAYYCGGECEYPIPDHMNTTNHAIVQSLVNSMKPKEVPGPC 336


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 247  WAIHLVLDITYVSLYYQGHIQRTHQQLDSI 336
            W + +  +ITY+    + HI + + QL+ I
Sbjct: 1297 WPLGVRTNITYIEETSEVHISKEYLQLEPI 1326


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 247  WAIHLVLDITYVSLYYQGHIQRTHQQLDSI 336
            W + +  +ITY+    + HI + + QL+ I
Sbjct: 1297 WPLGVRTNITYIEETSEVHISKEYLQLEPI 1326


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 205 DFNWEAKPNKFFYNVESSGALKPENIVLMG 116
           D+  E   +KF  ++ + G  KP+ I++ G
Sbjct: 221 DWTKEDGTDKFMSHIHNDGDNKPDTILVNG 250


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 291 LSGSYSKDTPAVGFHFACSF 350
           +SG Y+K    +GF+  C F
Sbjct: 283 MSGPYTKGYGVMGFNEICEF 302


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 275 RMSHYIIRVIFKGHTSSWIPFC 340
           R+  +   ++FK     WIP C
Sbjct: 143 RLRKFFDELLFKCMKEKWIPLC 164


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 275 RMSHYIIRVIFKGHTSSWIPFC 340
           R+  +   ++FK     WIP C
Sbjct: 376 RLRKFFDELLFKCMKEKWIPLC 397


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 275 RMSHYIIRVIFKGHTSSWIPFC 340
           R+  +   ++FK     WIP C
Sbjct: 376 RLRKFFDELLFKCMKEKWIPLC 397


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/31 (22%), Positives = 17/31 (54%)
 Frame = -2

Query: 289 IMRHTLYPKPDEWPKSEHTELNEDQYEADFN 197
           ++RH +  KP  W + +     + +Y++ +N
Sbjct: 85  VIRHLIKNKPSWWQELQEKYDPKGEYKSRYN 115


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 295 DNIMRHTLYPKPDEWPKSE 239
           D IMR+ +  KPD W   E
Sbjct: 89  DFIMRYLIDNKPDYWKALE 107


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/17 (35%), Positives = 8/17 (47%)
 Frame = +2

Query: 326 WIPFCMLFPKTFFCICP 376
           W+     F + F C CP
Sbjct: 412 WLSCSSFFQQFFHCYCP 428


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +2

Query: 338 CMLFPKTFFCICP 376
           C    KTF C CP
Sbjct: 159 CQDLGKTFMCRCP 171


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1

Query: 247  WAIHLVLDITYVSLYYQGHIQRTHQQLDSI 336
            W   +  +ITY     + HI + + QL+ I
Sbjct: 1297 WPFGVKTNITYDESTQEVHISKEYLQLEPI 1326


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1

Query: 247  WAIHLVLDITYVSLYYQGHIQRTHQQLDSI 336
            W   +  +ITY     + HI + + QL+ I
Sbjct: 1297 WPFGVKTNITYDESTQEVHISKEYLQLEPI 1326


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,695
Number of Sequences: 336
Number of extensions: 2643
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)