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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310B05f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80215-1|CAB02268.2|  282|Caenorhabditis elegans Hypothetical pr...   160   5e-40
AF125965-2|AAL38961.1|  366|Caenorhabditis elegans Hypothetical ...    49   2e-06
Z78410-9|CAB01637.2|  304|Caenorhabditis elegans Hypothetical pr...    35   0.041
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p...    29   1.5  
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like...    29   1.5  
EF473218-1|ABQ42570.1|  765|Caenorhabditis elegans Y55D9A.1c pro...    29   2.0  
EF473217-1|ABQ42569.1|  818|Caenorhabditis elegans Y55D9A.1b pro...    29   2.0  
AL032649-5|CAM82814.1|  765|Caenorhabditis elegans Hypothetical ...    29   2.0  
AL032649-2|CAC70120.1|  818|Caenorhabditis elegans Hypothetical ...    29   2.0  
AL032649-1|CAA21701.1|  816|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p...    28   3.5  
AF125960-3|AAD14737.1|  446|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z80215-1|CAB02268.2|  282|Caenorhabditis elegans Hypothetical
           protein C36B1.3 protein.
          Length = 282

 Score =  160 bits (389), Expect = 5e-40
 Identities = 70/119 (58%), Positives = 91/119 (76%), Gaps = 2/119 (1%)
 Frame = -2

Query: 463 RHRDEDQADYGEADEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPTAGVSFEYDPDNIM 284
           R R   + ++   +EILI+KLRKGQEL L+AY KKGFGKEHAKWNPT GV+FEYDPDN +
Sbjct: 139 RERGSTRDEFHNREEILIVKLRKGQELNLKAYVKKGFGKEHAKWNPTCGVAFEYDPDNAL 198

Query: 283 RHTLYPKPDEWPKSEHTELNED--QYEADFNWEAKPNKFFYNVESSGALKPENIVLMGI 113
           RHT+YP  +EWP+S+H+ L ED  + EA F  + KPNKF++++E +GAL  + IV MGI
Sbjct: 199 RHTIYPNVEEWPRSDHSSLPEDSTEKEAPFEPDNKPNKFWFSIEGTGALPAQRIVTMGI 257


>AF125965-2|AAL38961.1|  366|Caenorhabditis elegans Hypothetical
           protein H43I07.2 protein.
          Length = 366

 Score = 48.8 bits (111), Expect = 2e-06
 Identities = 20/44 (45%), Positives = 31/44 (70%)
 Frame = -2

Query: 427 ADEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPTAGVSFEYDP 296
           +D+IL+ KLR GQE++   +A KG G++HAK++P A  S+   P
Sbjct: 215 SDDILVAKLRPGQEIEASCHAVKGIGRDHAKFSPVATASYRLLP 258


>Z78410-9|CAB01637.2|  304|Caenorhabditis elegans Hypothetical
           protein C51E3.5 protein.
          Length = 304

 Score = 34.7 bits (76), Expect = 0.041
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = +1

Query: 97  CFSVQLFPLIQYFLV*ELLMILHYKRICLVSLPS*SPPHTDLH*VQCARFWAIHLVLDIT 276
           C+ + + P+I   L   LLM +   R+  VS P     + +L   Q   + +IHL+  I 
Sbjct: 80  CYMLNVLPVIGLTLAAPLLMQIGLDRLLAVSFPI---RYRELQ-FQKLFYTSIHLIFPIL 135

Query: 277 Y-VSLYYQGHIQRTHQQL 327
           Y +S+ Y G ++R ++Q+
Sbjct: 136 YTISILYLGFLERNNEQV 153


>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical protein
            F15B9.7 protein.
          Length = 2577

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 13/23 (56%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
 Frame = -2

Query: 208  ADFNWEAKPNKFFYNVE-SSGAL 143
            A+F++EAK NKFF+ ++ SSG L
Sbjct: 958  AEFDYEAKANKFFFELQASSGQL 980


>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
            protein F15B9.7 protein.
          Length = 2577

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 13/23 (56%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
 Frame = -2

Query: 208  ADFNWEAKPNKFFYNVE-SSGAL 143
            A+F++EAK NKFF+ ++ SSG L
Sbjct: 958  AEFDYEAKANKFFFELQASSGQL 980


>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
            protein FMI-1 protein.
          Length = 2596

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 13/23 (56%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
 Frame = -2

Query: 208  ADFNWEAKPNKFFYNVE-SSGAL 143
            A+F++EAK NKFF+ ++ SSG L
Sbjct: 958  AEFDYEAKANKFFFELQASSGQL 980


>EF473218-1|ABQ42570.1|  765|Caenorhabditis elegans Y55D9A.1c
           protein.
          Length = 765

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -2

Query: 322 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 206
           +GVS  YD D +  H  Y   D  PK     L +  +E+
Sbjct: 234 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 272


>EF473217-1|ABQ42569.1|  818|Caenorhabditis elegans Y55D9A.1b
           protein.
          Length = 818

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -2

Query: 322 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 206
           +GVS  YD D +  H  Y   D  PK     L +  +E+
Sbjct: 287 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 325


>AL032649-5|CAM82814.1|  765|Caenorhabditis elegans Hypothetical
           protein Y55D9A.1c protein.
          Length = 765

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -2

Query: 322 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 206
           +GVS  YD D +  H  Y   D  PK     L +  +E+
Sbjct: 234 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 272


>AL032649-2|CAC70120.1|  818|Caenorhabditis elegans Hypothetical
           protein Y55D9A.1b protein.
          Length = 818

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -2

Query: 322 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 206
           +GVS  YD D +  H  Y   D  PK     L +  +E+
Sbjct: 287 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 325


>AL032649-1|CAA21701.1|  816|Caenorhabditis elegans Hypothetical
           protein Y55D9A.1a protein.
          Length = 816

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -2

Query: 322 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 206
           +GVS  YD D +  H  Y   D  PK     L +  +E+
Sbjct: 285 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 323


>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
           protein T20D3.11 protein.
          Length = 1843

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
 Frame = -2

Query: 436 YGEADEILIIKLRKGQELKLRAYAKKGFGKE--HAKWNPTAGVSFEYDPDNIMRHTLYPK 263
           YGE   IL    R+ ++   +   ++    E   + W+P      + +PD+I++  L+  
Sbjct: 3   YGELVHILDYYFRQLRDYSRQVQLERQADTEGRRSSWSPKHWFGVKGNPDDILKLPLH-F 61

Query: 262 PDEWP-KSEHTELNEDQYEADFNW 194
            D+ P  S H  LN   + ++ N+
Sbjct: 62  DDQLPTSSHHPPLNSSSHHSNHNY 85


>AF125960-3|AAD14737.1|  446|Caenorhabditis elegans Hypothetical
           protein T12B3.1 protein.
          Length = 446

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 4/29 (13%)
 Frame = -2

Query: 331 NPTAGVSFEYDPDNIMRHTLY----PKPD 257
           N T+G  F YDP+N+MR+ +Y    P PD
Sbjct: 122 NLTSG--FSYDPENLMRNGIYHYNFPLPD 148


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,302,281
Number of Sequences: 27780
Number of extensions: 234465
Number of successful extensions: 646
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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