BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS310B05f (521 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z80215-1|CAB02268.2| 282|Caenorhabditis elegans Hypothetical pr... 160 5e-40 AF125965-2|AAL38961.1| 366|Caenorhabditis elegans Hypothetical ... 49 2e-06 Z78410-9|CAB01637.2| 304|Caenorhabditis elegans Hypothetical pr... 35 0.041 Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 29 1.5 Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 29 1.5 AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 29 1.5 EF473218-1|ABQ42570.1| 765|Caenorhabditis elegans Y55D9A.1c pro... 29 2.0 EF473217-1|ABQ42569.1| 818|Caenorhabditis elegans Y55D9A.1b pro... 29 2.0 AL032649-5|CAM82814.1| 765|Caenorhabditis elegans Hypothetical ... 29 2.0 AL032649-2|CAC70120.1| 818|Caenorhabditis elegans Hypothetical ... 29 2.0 AL032649-1|CAA21701.1| 816|Caenorhabditis elegans Hypothetical ... 29 2.0 Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 28 3.5 AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical ... 27 8.1 >Z80215-1|CAB02268.2| 282|Caenorhabditis elegans Hypothetical protein C36B1.3 protein. Length = 282 Score = 160 bits (389), Expect = 5e-40 Identities = 70/119 (58%), Positives = 91/119 (76%), Gaps = 2/119 (1%) Frame = -2 Query: 463 RHRDEDQADYGEADEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPTAGVSFEYDPDNIM 284 R R + ++ +EILI+KLRKGQEL L+AY KKGFGKEHAKWNPT GV+FEYDPDN + Sbjct: 139 RERGSTRDEFHNREEILIVKLRKGQELNLKAYVKKGFGKEHAKWNPTCGVAFEYDPDNAL 198 Query: 283 RHTLYPKPDEWPKSEHTELNED--QYEADFNWEAKPNKFFYNVESSGALKPENIVLMGI 113 RHT+YP +EWP+S+H+ L ED + EA F + KPNKF++++E +GAL + IV MGI Sbjct: 199 RHTIYPNVEEWPRSDHSSLPEDSTEKEAPFEPDNKPNKFWFSIEGTGALPAQRIVTMGI 257 >AF125965-2|AAL38961.1| 366|Caenorhabditis elegans Hypothetical protein H43I07.2 protein. Length = 366 Score = 48.8 bits (111), Expect = 2e-06 Identities = 20/44 (45%), Positives = 31/44 (70%) Frame = -2 Query: 427 ADEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPTAGVSFEYDP 296 +D+IL+ KLR GQE++ +A KG G++HAK++P A S+ P Sbjct: 215 SDDILVAKLRPGQEIEASCHAVKGIGRDHAKFSPVATASYRLLP 258 >Z78410-9|CAB01637.2| 304|Caenorhabditis elegans Hypothetical protein C51E3.5 protein. Length = 304 Score = 34.7 bits (76), Expect = 0.041 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = +1 Query: 97 CFSVQLFPLIQYFLV*ELLMILHYKRICLVSLPS*SPPHTDLH*VQCARFWAIHLVLDIT 276 C+ + + P+I L LLM + R+ VS P + +L Q + +IHL+ I Sbjct: 80 CYMLNVLPVIGLTLAAPLLMQIGLDRLLAVSFPI---RYRELQ-FQKLFYTSIHLIFPIL 135 Query: 277 Y-VSLYYQGHIQRTHQQL 327 Y +S+ Y G ++R ++Q+ Sbjct: 136 YTISILYLGFLERNNEQV 153 >Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical protein F15B9.7 protein. Length = 2577 Score = 29.5 bits (63), Expect = 1.5 Identities = 13/23 (56%), Positives = 19/23 (82%), Gaps = 1/23 (4%) Frame = -2 Query: 208 ADFNWEAKPNKFFYNVE-SSGAL 143 A+F++EAK NKFF+ ++ SSG L Sbjct: 958 AEFDYEAKANKFFFELQASSGQL 980 >Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical protein F15B9.7 protein. Length = 2577 Score = 29.5 bits (63), Expect = 1.5 Identities = 13/23 (56%), Positives = 19/23 (82%), Gaps = 1/23 (4%) Frame = -2 Query: 208 ADFNWEAKPNKFFYNVE-SSGAL 143 A+F++EAK NKFF+ ++ SSG L Sbjct: 958 AEFDYEAKANKFFFELQASSGQL 980 >AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like protein FMI-1 protein. Length = 2596 Score = 29.5 bits (63), Expect = 1.5 Identities = 13/23 (56%), Positives = 19/23 (82%), Gaps = 1/23 (4%) Frame = -2 Query: 208 ADFNWEAKPNKFFYNVE-SSGAL 143 A+F++EAK NKFF+ ++ SSG L Sbjct: 958 AEFDYEAKANKFFFELQASSGQL 980 >EF473218-1|ABQ42570.1| 765|Caenorhabditis elegans Y55D9A.1c protein. Length = 765 Score = 29.1 bits (62), Expect = 2.0 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = -2 Query: 322 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 206 +GVS YD D + H Y D PK L + +E+ Sbjct: 234 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 272 >EF473217-1|ABQ42569.1| 818|Caenorhabditis elegans Y55D9A.1b protein. Length = 818 Score = 29.1 bits (62), Expect = 2.0 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = -2 Query: 322 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 206 +GVS YD D + H Y D PK L + +E+ Sbjct: 287 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 325 >AL032649-5|CAM82814.1| 765|Caenorhabditis elegans Hypothetical protein Y55D9A.1c protein. Length = 765 Score = 29.1 bits (62), Expect = 2.0 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = -2 Query: 322 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 206 +GVS YD D + H Y D PK L + +E+ Sbjct: 234 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 272 >AL032649-2|CAC70120.1| 818|Caenorhabditis elegans Hypothetical protein Y55D9A.1b protein. Length = 818 Score = 29.1 bits (62), Expect = 2.0 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = -2 Query: 322 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 206 +GVS YD D + H Y D PK L + +E+ Sbjct: 287 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 325 >AL032649-1|CAA21701.1| 816|Caenorhabditis elegans Hypothetical protein Y55D9A.1a protein. Length = 816 Score = 29.1 bits (62), Expect = 2.0 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = -2 Query: 322 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 206 +GVS YD D + H Y D PK L + +E+ Sbjct: 285 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 323 >Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical protein T20D3.11 protein. Length = 1843 Score = 28.3 bits (60), Expect = 3.5 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Frame = -2 Query: 436 YGEADEILIIKLRKGQELKLRAYAKKGFGKE--HAKWNPTAGVSFEYDPDNIMRHTLYPK 263 YGE IL R+ ++ + ++ E + W+P + +PD+I++ L+ Sbjct: 3 YGELVHILDYYFRQLRDYSRQVQLERQADTEGRRSSWSPKHWFGVKGNPDDILKLPLH-F 61 Query: 262 PDEWP-KSEHTELNEDQYEADFNW 194 D+ P S H LN + ++ N+ Sbjct: 62 DDQLPTSSHHPPLNSSSHHSNHNY 85 >AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical protein T12B3.1 protein. Length = 446 Score = 27.1 bits (57), Expect = 8.1 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 4/29 (13%) Frame = -2 Query: 331 NPTAGVSFEYDPDNIMRHTLY----PKPD 257 N T+G F YDP+N+MR+ +Y P PD Sbjct: 122 NLTSG--FSYDPENLMRNGIYHYNFPLPD 148 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,302,281 Number of Sequences: 27780 Number of extensions: 234465 Number of successful extensions: 646 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 621 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 645 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1017709248 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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