Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310B04f
         (375 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5DY70 Cluster: Putative uncharacterized protein; n=2; ...    32   3.0  
UniRef50_P11976 Cluster: Prestalk protein precursor; n=7; Dictyo...    31   5.2  
UniRef50_A0C3E8 Cluster: Chromosome undetermined scaffold_147, w...    31   9.1  

>UniRef50_A5DY70 Cluster: Putative uncharacterized protein; n=2;
           Saccharomycetales|Rep: Putative uncharacterized protein
           - Lodderomyces elongisporus (Yeast) (Saccharomyces
           elongisporus)
          Length = 638

 Score = 32.3 bits (70), Expect = 3.0
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = +3

Query: 30  AIRSG*SSTDYSSELVRKRSRHRSFPNGAVLQTTINERLES 152
           A  S  +ST  SS   R+  RH+SF N A L T +  RLE+
Sbjct: 63  ASSSSLTSTSTSSSSKRRSKRHKSFINIAPLNTPLQHRLET 103


>UniRef50_P11976 Cluster: Prestalk protein precursor; n=7;
           Dictyostelium|Rep: Prestalk protein precursor -
           Dictyostelium discoideum (Slime mold)
          Length = 1046

 Score = 31.5 bits (68), Expect = 5.2
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -1

Query: 105 ENCDDANACALVH*NSLCCSN 43
           ENC+D N C L   N+ CCSN
Sbjct: 25  ENCNDGNKCTLDKCNNGCCSN 45


>UniRef50_A0C3E8 Cluster: Chromosome undetermined scaffold_147,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_147,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 321

 Score = 30.7 bits (66), Expect = 9.1
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +3

Query: 36  RSG*SSTDYSSELVRKRSRHRSFPNGAVLQTTINERLESHCS 161
           + G    D+S+E + K  R RS  NG  L     ERLE+ CS
Sbjct: 6   KKGDQVEDFSTEQLNKLYRKRSEINGVPLCKIFKERLEAVCS 47


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 337,903,700
Number of Sequences: 1657284
Number of extensions: 5093145
Number of successful extensions: 11126
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11122
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14019197511
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)