Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310B02f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   2.7  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   4.7  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   8.2  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 139 LKSSGPAADVSSPPCCQKCH 80
           L+  GP   +S    C+KCH
Sbjct: 621 LQEEGPLKQLSGKAVCRKCH 640


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
 Frame = +1

Query: 160 EVIDITEPGRESDKDFMQNN---AKSSGGTVSDPNPRSPLPPQMFNDEEYCGDY 312
           ++++  E G  +  + + N     + S    + P  R+P PP +    E  GDY
Sbjct: 765 DLLENCEAGSTASAECVTNGDYMLQPSNAPFTPPTDRTPTPPPLPATAEPMGDY 818


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 338 LILLSSF*SWRHLQKNHLKKQKRKVP 415
           L   SS  S R + KNHLKK   + P
Sbjct: 383 LYATSSSQSKRDIAKNHLKKVTEQFP 408


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.314    0.135    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,104
Number of Sequences: 2352
Number of extensions: 7646
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)