Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310A12f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   8.7  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 131 QHETNIMSTVKSDSQGQNDDRQG 63
           QH TNI+S  +  S   +DD +G
Sbjct: 502 QHYTNIISQEQIISWRSSDDAKG 524


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 363 KTDGAIEDGSKKEKKPENNAAYY 431
           KTD ++   SKK+K       YY
Sbjct: 71  KTDNSLSATSKKDKDGYKVVCYY 93


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 433 EGRAWEKTFSKMLLKFTL 486
           EG+ WE T +  + KF L
Sbjct: 176 EGKNWEITMAVPIAKFRL 193


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -1

Query: 494  LAYKVNFKSILENVFSQALPSV 429
            LAY     SI  N  SQA PSV
Sbjct: 1419 LAYVQQRMSIAPNRVSQARPSV 1440


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -1

Query: 494  LAYKVNFKSILENVFSQALPSV 429
            LAY     SI  N  SQA PSV
Sbjct: 1419 LAYVQQRMSIAPNRVSQARPSV 1440


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = +3

Query: 351 WNEPKTDGAIEDGSKKEKKPEN 416
           +++ +  G I+DG   + +PE+
Sbjct: 402 YHQNEVGGVIDDGGSGQNQPES 423


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,599
Number of Sequences: 336
Number of extensions: 2277
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)