Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310A09f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72; Fungi/... 100 2e-20
UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6; Metazoa... 99 5e-20
UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella ve... 87 2e-16
UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila melanogaster|... 77 3e-13
UniRef50_Q0ULI2 Cluster: Predicted protein; n=12; Pezizomycotina... 70 4e-11
UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22; Fung... 65 8e-10
UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyosteli... 56 5e-07
UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4; Bilater... 56 7e-07
UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22; Viri... 54 3e-06
UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2; ... 52 6e-06
UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes va... 47 2e-04
UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=... 47 3e-04
UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;... 45 0.001
UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10; Eurya... 44 0.002
UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containin... 44 0.002
UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius... 44 0.002
UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10... 43 0.005
UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13... 43 0.005
UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3; ... 42 0.006
UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lambl... 42 0.006
UniRef50_O22165 Cluster: Probable ribosome biogenesis protein RL... 42 0.009
UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6; T... 42 0.011
UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5; ... 41 0.015
UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1; ... 41 0.015
UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177, w... 41 0.020
UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative... 40 0.026
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 40 0.026
UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein RL... 40 0.035
UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2; Deutero... 40 0.046
UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2; Cryptos... 40 0.046
UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN full... 39 0.060
UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein RL... 39 0.060
UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;... 39 0.080
UniRef50_A2ZTR3 Cluster: Putative uncharacterized protein; n=3; ... 38 0.11
UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein RL... 38 0.11
UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2; Cryptospor... 38 0.14
UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1; ... 38 0.18
UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3; ... 37 0.24
UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=... 37 0.24
UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein RL... 37 0.24
UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellul... 37 0.32
UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=... 36 0.43
UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, wh... 36 0.56
UniRef50_P34326 Cluster: Homeobox protein engrailed-like ceh-16;... 35 0.98
UniRef50_Q96AX6 Cluster: DENND1B protein; n=2; Homo sapiens|Rep:... 34 1.7
UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia... 33 3.0
UniRef50_Q997C6 Cluster: T93 protein; n=1; Tupaiid herpesvirus 1... 32 9.2
UniRef50_Q7QX53 Cluster: GLP_192_18252_20387; n=1; Giardia lambl... 32 9.2
>UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24 -
Homo sapiens (Human)
Length = 157
Score = 100 bits (239), Expect = 2e-20
Identities = 48/78 (61%), Positives = 54/78 (69%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250
R DGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE AI
Sbjct: 23 RTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAI 82
Query: 249 VGASLSDIMAKRNMKPEV 196
GASL+DIMAKRN KPEV
Sbjct: 83 TGASLADIMAKRNQKPEV 100
>UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6;
Metazoa|Rep: 60S ribosomal protein L24 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 157
Score = 99.1 bits (236), Expect = 5e-20
Identities = 47/78 (60%), Positives = 55/78 (70%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250
RVDGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE AI
Sbjct: 23 RVDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEVSKKRTRRAVKFQRAI 82
Query: 249 VGASLSDIMAKRNMKPEV 196
GASL++I+AKRN KPEV
Sbjct: 83 TGASLAEILAKRNQKPEV 100
>UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 143
Score = 87.0 bits (206), Expect = 2e-16
Identities = 42/74 (56%), Positives = 49/74 (66%)
Frame = -3
Query: 417 KTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAIVGAS 238
K F FLN +CE A LMRRNPR+VTWTVLYR K KKG +EE ++ GAS
Sbjct: 7 KVFNFLNKRCERALLMRRNPREVTWTVLYRCKHKKGTQEEVSKKRTRRNIKFQRSVQGAS 66
Query: 237 LSDIMAKRNMKPEV 196
L +I+AKRN KPEV
Sbjct: 67 LDNILAKRNQKPEV 80
>UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila
melanogaster|Rep: RH14088p - Drosophila melanogaster
(Fruit fly)
Length = 123
Score = 76.6 bits (180), Expect = 3e-13
Identities = 38/59 (64%), Positives = 43/59 (72%)
Frame = -3
Query: 372 MRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAIVGASLSDIMAKRNMKPEV 196
M+RNPRKVTWTVLYRRK +KG EEE AIVGASL++I+AKRNMKPEV
Sbjct: 1 MKRNPRKVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 59
>UniRef50_Q0ULI2 Cluster: Predicted protein; n=12;
Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
nodorum (Septoria nodorum)
Length = 161
Score = 69.7 bits (163), Expect = 4e-11
Identities = 36/77 (46%), Positives = 43/77 (55%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250
R D K F F N K E+ L R+NPRK++WT LYRR KKG EE AI
Sbjct: 23 RGDSKIFRFQNGKTESLFLQRKNPRKISWTTLYRRMHKKGISEEVAKKRTRRTVKHQRAI 82
Query: 249 VGASLSDIMAKRNMKPE 199
VGASL I +R+ +PE
Sbjct: 83 VGASLDVIKERRSQRPE 99
>UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 155
Score = 65.3 bits (152), Expect = 8e-10
Identities = 34/84 (40%), Positives = 43/84 (51%)
Frame = -3
Query: 447 RAEFGTRVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXX 268
R R D K F F NSK + R+NPR++ WTVL+R+ KKG EE
Sbjct: 17 RGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITEEVAKKRSRKTV 76
Query: 267 XXXXAIVGASLSDIMAKRNMKPEV 196
I GASL I +R++KPEV
Sbjct: 77 KAQRPITGASLDLIKERRSLKPEV 100
>UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L24 -
Dictyostelium discoideum AX4
Length = 127
Score = 56.0 bits (129), Expect = 5e-07
Identities = 29/78 (37%), Positives = 39/78 (50%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250
R D K F F+N+K E+ + NPR + W+++YRR +K + I
Sbjct: 23 RGDSKVFHFINTKVESLFFRKINPRDIRWSMVYRRIYKNTTTDVSAKKKARKTKKVERNI 82
Query: 249 VGASLSDIMAKRNMKPEV 196
VGASL I KR KPEV
Sbjct: 83 VGASLEVIQQKRAQKPEV 100
>UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4;
Bilateria|Rep: 60S ribosomal protein L24 -
Caenorhabditis elegans
Length = 159
Score = 55.6 bits (128), Expect = 7e-07
Identities = 33/76 (43%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK---GQEEEXXXXXXXXXXXXX 259
R DGK FL+ K +RRNPR + WTVLYR K KK GQE+
Sbjct: 23 RTDGKVQIFLSGKALKGAKLRRNPRDIRWTVLYRIKNKKGTHGQEQVTRKKTKKSVQVVN 82
Query: 258 XAIVGASLSDIMAKRN 211
A+ G SL I+AKRN
Sbjct: 83 RAVAGLSLDAILAKRN 98
>UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22;
Viridiplantae|Rep: 60S ribosomal protein L24-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 164
Score = 53.6 bits (123), Expect = 3e-06
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK-GQEEEXXXXXXXXXXXXXXA 253
R D + F FLNSKC+ + P K+ WT +YR++ KK +E +
Sbjct: 25 RSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRS 84
Query: 252 IVGASLSDIMAKRNMKPEV 196
IVGA+L I KR KPEV
Sbjct: 85 IVGATLEVIQKKRAEKPEV 103
>UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L24 - Entamoeba histolytica HM-1:IMSS
Length = 163
Score = 52.4 bits (120), Expect = 6e-06
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEE 298
R+D K+FTF+N K L + NPRKV WT +YR+ KKGQ+ E
Sbjct: 25 RLDLKSFTFINKKSLMQFLRKTNPRKVFWTAIYRQLNKKGQQNE 68
>UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes
vannus|Rep: Ribosomal protein L24 - Euplotes vannus
Length = 155
Score = 47.2 bits (107), Expect = 2e-04
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250
R DG+TF FL+ K + H + +TWT ++RRK +KG + A+
Sbjct: 25 RKDGRTFFFLSRKTRSLHFQKVKTSDLTWTPMWRRKNRKGAYAKAARVRTKRTTRKMKAV 84
Query: 249 VGASLSDIMAKRN 211
VG SL++I RN
Sbjct: 85 VGMSLAEINRIRN 97
>UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L24, putative -
Theileria parva
Length = 159
Score = 46.8 bits (106), Expect = 3e-04
Identities = 25/71 (35%), Positives = 35/71 (49%)
Frame = -3
Query: 423 DGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAIVG 244
DGK + F+N K A H + P K+ W + +R+ KK Q E AIVG
Sbjct: 36 DGKVYFFINGKSAAFHKRKVKPAKLKWNLAWRKANKKFQTELFNRKRSKKTSRPQKAIVG 95
Query: 243 ASLSDIMAKRN 211
SL D+ +KR+
Sbjct: 96 LSLDDLKSKRS 106
>UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;
cellular organisms|Rep: Ribosome biogenesis protein
rlp24 - Schizosaccharomyces pombe (Fission yeast)
Length = 192
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 313
R D K F F SKC M+RNPRKV WT YR+ K
Sbjct: 23 RNDSKVFRFCRSKCHKNFKMKRNPRKVAWTKAYRKAHGK 61
>UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanococcus jannaschii
Length = 70
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = -3
Query: 423 DGKTFTFLNSKCEAAHLMRRNPRKVTWTVLY---RRKFKKGQEEE 298
DG F +SKCE ++ M RNPRK+ WT +Y + + KK QE +
Sbjct: 26 DGTVLYFCSSKCEKSYRMGRNPRKLKWTKVYQDMKAELKKAQESQ 70
>UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L24e containing protein - Tetrahymena
thermophila SB210
Length = 158
Score = 44.0 bits (99), Expect = 0.002
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = -3
Query: 423 DGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAIVG 244
DG+ F FL K + L + +K+TWT+ RR +KK + + AIVG
Sbjct: 27 DGRGFFFLTKKAKCLSLRKVKAQKITWTIARRRLWKKVKATDIAQKKKKRNVTVARAIVG 86
Query: 243 ASLSDIMAKRNM 208
SL +I ++N+
Sbjct: 87 ISLEEINRRKNL 98
>UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius
melpomene|Rep: Ribosomal protein L23a - Heliconius
melpomene
Length = 221
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +3
Query: 453 KKQPEKSGSSGSKPAEKKPATA 518
KKQPEKSGS+ +KPAEKKPATA
Sbjct: 4 KKQPEKSGSAAAKPAEKKPATA 25
>UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 199
Score = 42.7 bits (96), Expect = 0.005
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC A RRNPRK+ WT +R+
Sbjct: 23 RNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRK 57
>UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 198
Score = 42.7 bits (96), Expect = 0.005
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC A RRNPRK+ WT +R+
Sbjct: 23 RNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRK 57
>UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3;
cellular organisms|Rep: 60S ribosomal protein L24 -
Entamoeba histolytica HM-1:IMSS
Length = 179
Score = 42.3 bits (95), Expect = 0.006
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 328
R D K F F SKC + M+RNPRK WT YR
Sbjct: 23 RNDAKVFWFCRSKCHKSFKMKRNPRKFKWTKAYR 56
>UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_154_26137_25568 - Giardia lamblia
ATCC 50803
Length = 189
Score = 42.3 bits (95), Expect = 0.006
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 328
R D + F F SKC M+RNPRKV WT YR
Sbjct: 24 RNDSRVFRFCTSKCHRNFKMKRNPRKVRWTKTYR 57
>UniRef50_O22165 Cluster: Probable ribosome biogenesis protein
RLP24; n=3; core eudicotyledons|Rep: Probable ribosome
biogenesis protein RLP24 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 159
Score = 41.9 bits (94), Expect = 0.009
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEE 298
R D K F F SKC M+RNPRKV WT +R K ++
Sbjct: 23 RNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHGKDMTKD 66
>UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L24, putative -
Leishmania major
Length = 124
Score = 41.5 bits (93), Expect = 0.011
Identities = 24/70 (34%), Positives = 32/70 (45%)
Frame = -3
Query: 408 TFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAIVGASLSD 229
TF KC A ++ ++NPR + WT YRR +K + AIVGA LS
Sbjct: 34 TFSRPKCFALYMRKKNPRFIPWTRTYRRIHRKTTTDRVNRRRAARAVRVQRAIVGADLSY 93
Query: 228 IMAKRNMKPE 199
I R + E
Sbjct: 94 IQEVRAARKE 103
>UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 213
Score = 41.1 bits (92), Expect = 0.015
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 313
R D + F F SKC + NPRKV WT +YR++ K
Sbjct: 23 RNDARVFRFCRSKCHKHFKAKHNPRKVKWTKIYRKERNK 61
>UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 181
Score = 41.1 bits (92), Expect = 0.015
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC ++RNPRKV WT +R+
Sbjct: 23 RNDAKIFKFCKSKCHKNFKLKRNPRKVRWTKAFRK 57
>UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=7; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_177,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 162
Score = 40.7 bits (91), Expect = 0.020
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = -3
Query: 423 DGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAIVG 244
DG+ F +LN K A + +++ WTV +RR KK + +E AIVG
Sbjct: 27 DGRLFYYLNQKSRAFSARKIKSQEIQWTVAWRRLNKKIKTDEGAKKRRIRNLKVQRAIVG 86
Query: 243 ASLSDIMAKR 214
SL +I +R
Sbjct: 87 ISLEEIRRRR 96
>UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative;
n=2; Theileria|Rep: 60S ribosomal protein L24/L30,
putative - Theileria annulata
Length = 187
Score = 40.3 bits (90), Expect = 0.026
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC + NPRK+ WT YRR
Sbjct: 23 RNDSKIFRFCRSKCHRHFKAKHNPRKIKWTKAYRR 57
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 40.3 bits (90), Expect = 0.026
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 328
R D K+F F SKC A M+R PRK+ WT +R
Sbjct: 23 RNDAKSFRFCRSKCHANFKMKRQPRKLKWTKTHR 56
>UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein
RLP24; n=10; Coelomata|Rep: Probable ribosome biogenesis
protein RLP24 - Drosophila melanogaster (Fruit fly)
Length = 191
Score = 39.9 bits (89), Expect = 0.035
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F KC A ++NPRKV WT YR+
Sbjct: 23 RNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRK 57
>UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2;
Deuterostomia|Rep: 60S ribosomal protein L24 -
Oikopleura dioica (Tunicate)
Length = 165
Score = 39.5 bits (88), Expect = 0.046
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 313
R D K F F +KC ++NPRK+ WT YR+ K
Sbjct: 23 RNDSKQFRFCTAKCNKMFKKKKNPRKIKWTKAYRKAHGK 61
>UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L24 -
Cryptosporidium parvum Iowa II
Length = 202
Score = 39.5 bits (88), Expect = 0.046
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC M+ NPRK WT YR+
Sbjct: 28 RNDAKIFRFCRSKCHRHFKMKHNPRKSKWTKAYRK 62
>UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830167A21
product:Similar to 60S ribosomal protein L30 isolog,
full insert sequence; n=3; Murinae|Rep: Bone marrow
macrophage cDNA, RIKEN full-length enriched library,
clone:I830167A21 product:Similar to 60S ribosomal
protein L30 isolog, full insert sequence - Mus musculus
(Mouse)
Length = 171
Score = 39.1 bits (87), Expect = 0.060
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein
RLP24; n=35; Euteleostomi|Rep: Probable ribosome
biogenesis protein RLP24 - Homo sapiens (Human)
Length = 163
Score = 39.1 bits (87), Expect = 0.060
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;
Ajellomyces capsulatus NAm1|Rep: Ribosome biogenesis
protein RLP24 - Ajellomyces capsulatus NAm1
Length = 191
Score = 38.7 bits (86), Expect = 0.080
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 328
R D +TF F SKC M+R PRK+ WT +R
Sbjct: 23 RNDARTFRFCRSKCHKNFKMKRQPRKLKWTKTHR 56
>UniRef50_A2ZTR3 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 202
Score = 38.3 bits (85), Expect = 0.11
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -3
Query: 411 FTFLNSKCEAAHLMRRNPRKVTWTVLYR 328
F F SKC M+RNPRKV WT YR
Sbjct: 67 FRFCRSKCHKNFKMKRNPRKVKWTKAYR 94
>UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Eukaryota|Rep: Probable ribosome biogenesis
protein RLP24 - Dictyostelium discoideum (Slime mold)
Length = 164
Score = 38.3 bits (85), Expect = 0.11
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC ++RNPRK WT +R+
Sbjct: 23 RNDCKQFRFCRSKCHKNFKLKRNPRKTRWTKAFRK 57
>UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2;
Cryptosporidium|Rep: Ribosomal protein L24e -
Cryptosporidium hominis
Length = 133
Score = 37.9 bits (84), Expect = 0.14
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -3
Query: 423 DGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK-GQEEEXXXXXXXXXXXXXXAIV 247
DG+ TFLN KC + + P K+ W+V +RR KK + AI
Sbjct: 32 DGRVSTFLNQKCASLFHQKIRPVKLKWSVGWRRMNKKLTNQGATSKRRNKKTVRLHKAIE 91
Query: 246 GASLSDIMAKR 214
G SL DI KR
Sbjct: 92 GLSLDDIKQKR 102
>UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 178
Score = 37.5 bits (83), Expect = 0.18
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 313
R D K F F SKC + ++NPRK +WT +R K
Sbjct: 24 RNDCKVFRFCKSKCRKFWMKKKNPRKFSWTKAFRAAMGK 62
>UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 178
Score = 37.1 bits (82), Expect = 0.24
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = -3
Query: 423 DGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAIVG 244
DGK + +L+SK + L ++ K+ WT +RR KK + E A+ G
Sbjct: 32 DGKVYFYLSSKFASLALQKKKAAKLRWTQTWRRNNKKTKVEATQRRRYKKTIKVQKAVCG 91
Query: 243 ASLSDIMAKR 214
S+ DI ++
Sbjct: 92 LSVEDIRNRK 101
>UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=2;
Plasmodium (Vinckeia)|Rep: 60S ribosomal protein L24,
putative - Plasmodium chabaudi
Length = 130
Score = 37.1 bits (82), Expect = 0.24
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = -3
Query: 423 DGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAIVG 244
DGK + +L+SK + L ++ K+ WT +RR KK + E A+ G
Sbjct: 32 DGKVYFYLSSKFASLALQKKKAAKLRWTQTWRRNNKKTKVEATQRRRYKKTIKVQKAVCG 91
Query: 243 ASLSDIMAKR 214
S+ DI ++
Sbjct: 92 LSVEDIRNRK 101
>UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein
RLP24; n=1; Encephalitozoon cuniculi|Rep: Probable
ribosome biogenesis protein RLP24 - Encephalitozoon
cuniculi
Length = 155
Score = 37.1 bits (82), Expect = 0.24
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 313
R D K F F KC R NPRKV WT + R+ K
Sbjct: 23 RNDAKVFRFCRPKCRKLFARRVNPRKVKWTKISRKMANK 61
>UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellular
organisms|Rep: 50S ribosomal protein L24e -
Archaeoglobus fulgidus
Length = 58
Score = 36.7 bits (81), Expect = 0.32
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRR 325
R DG+ F F + KCE L ++R PRK+ WT Y R
Sbjct: 23 RRDGRVFYFCSGKCEKNMLKLKRKPRKLKWTKHYSR 58
>UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=1;
Babesia bovis|Rep: 60S ribosomal protein L24, putative -
Babesia bovis
Length = 192
Score = 36.3 bits (80), Expect = 0.43
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 313
R D K F F SKC + NPRK+ WT RR K
Sbjct: 23 RNDSKIFRFCRSKCHKHFKAKHNPRKLKWTKAARRMHGK 61
>UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, whole
genome shotgun sequence; n=4; Eukaryota|Rep: Chromosome
undetermined scaffold_52, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 171
Score = 35.9 bits (79), Expect = 0.56
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC + NPRK WT +R+
Sbjct: 23 RNDSKMFRFCRSKCHRHFKAQHNPRKTRWTKAFRK 57
>UniRef50_P34326 Cluster: Homeobox protein engrailed-like ceh-16;
n=2; Caenorhabditis|Rep: Homeobox protein engrailed-like
ceh-16 - Caenorhabditis elegans
Length = 187
Score = 35.1 bits (77), Expect = 0.98
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 411 RFFHPPSCRIRHEAKKQPEKSGSSGSKPAEKKPATA 518
R+ PS RH ++ E +GSSGS EK+P TA
Sbjct: 58 RYSDRPSAGPRHRKSRKRESTGSSGSSEEEKRPRTA 93
>UniRef50_Q96AX6 Cluster: DENND1B protein; n=2; Homo sapiens|Rep:
DENND1B protein - Homo sapiens (Human)
Length = 166
Score = 34.3 bits (75), Expect = 1.7
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 334 QDSPCYFTRIPPHQMGGFTF*IQECEGFSIHP 429
+DSP Y RIPP ++ F F I++ E F + P
Sbjct: 118 EDSPAYLPRIPPGKVRRFAFCIKKLENFPVGP 149
>UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_2_13062_12754 - Giardia lamblia ATCC
50803
Length = 102
Score = 33.5 bits (73), Expect = 3.0
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 432 TRVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
+R D FLN K +L + NPRK+ WT+ RR
Sbjct: 23 SRHDKVLLIFLNRKASVHYLNKWNPRKIRWTLASRR 58
>UniRef50_Q997C6 Cluster: T93 protein; n=1; Tupaiid herpesvirus
1|Rep: T93 protein - Tupaiid herpesvirus 1 (strain 1)
(TuHV-1) (Herpesvirus tupaia (strain1))
Length = 541
Score = 31.9 bits (69), Expect = 9.2
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +2
Query: 275 LLVRFFACSSSWPFLNLRLYRTVHVTLRGFLLIKWAASHFEFRNVKVFPSTLVPNSARGE 454
L V F + P+ R R +HV + G +W ++ ++ + LVPN RG+
Sbjct: 20 LPVHLFLTERTLPYAVFRGLRALHVRVAGAADAEWRRLAYQTWPRELLLARLVPNRLRGD 79
Query: 455 EATR 466
E R
Sbjct: 80 ERVR 83
>UniRef50_Q7QX53 Cluster: GLP_192_18252_20387; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_192_18252_20387 - Giardia lamblia
ATCC 50803
Length = 711
Score = 31.9 bits (69), Expect = 9.2
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +3
Query: 300 LPLGPF*TCACTGQSMLLYEDSSSSNGRLHILNSGM*RFFHPPSCRIRHEAKKQPEKS-- 473
+P+G T G +L E +NGRLHI F P C ++ + PE +
Sbjct: 43 VPVGALLTLLEKGMQLLDIEVHMDANGRLHICEQPF-SLFQPHRCSVKTLRNRDPESNHL 101
Query: 474 GSSGSKPAE 500
G +P E
Sbjct: 102 DEHGQQPEE 110
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 386,856,828
Number of Sequences: 1657284
Number of extensions: 6789060
Number of successful extensions: 17654
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 17139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17642
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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