BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS310A09f (521 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value M94314-1|AAC28251.1| 157|Homo sapiens ribosomal protein L30 pro... 100 4e-21 CR456729-1|CAG33010.1| 157|Homo sapiens RPL24 protein. 100 4e-21 BC070193-1|AAH70193.1| 157|Homo sapiens ribosomal protein L24 p... 100 4e-21 BC000690-1|AAH00690.1| 157|Homo sapiens ribosomal protein L24 p... 100 4e-21 AB061828-1|BAB79466.1| 157|Homo sapiens ribosomal protein L24 p... 100 4e-21 AL158815-1|CAI19461.1| 128|Homo sapiens se, the PEX6 gene for p... 97 3e-20 CR457179-1|CAG33460.1| 163|Homo sapiens C15orf15 protein. 39 0.009 BC093067-1|AAH93067.1| 163|Homo sapiens chromosome 15 open read... 39 0.009 BC035995-1|AAH35995.1| 163|Homo sapiens chromosome 15 open read... 39 0.009 BC026267-1|AAH26267.1| 163|Homo sapiens chromosome 15 open read... 39 0.009 BC026266-1|AAH26266.1| 163|Homo sapiens chromosome 15 open read... 39 0.009 BC016777-1|AAH16777.1| 163|Homo sapiens chromosome 15 open read... 39 0.009 BC016725-1|AAH16725.1| 163|Homo sapiens chromosome 15 open read... 39 0.009 BC016331-1|AAH16331.1| 163|Homo sapiens chromosome 15 open read... 39 0.009 BC016312-1|AAH16312.1| 163|Homo sapiens chromosome 15 open read... 39 0.009 BC012913-1|AAH12913.1| 163|Homo sapiens chromosome 15 open read... 39 0.009 BC009604-1|AAH09604.1| 163|Homo sapiens chromosome 15 open read... 39 0.009 BC009593-1|AAH09593.1| 163|Homo sapiens chromosome 15 open read... 39 0.009 BC008449-1|AAH08449.1| 163|Homo sapiens chromosome 15 open read... 39 0.009 BC008422-1|AAH08422.1| 163|Homo sapiens chromosome 15 open read... 39 0.009 BC008409-1|AAH08409.1| 163|Homo sapiens chromosome 15 open read... 39 0.009 AF201949-1|AAF17241.1| 163|Homo sapiens 60S ribosomal protein L... 39 0.009 AF165521-1|AAF86651.1| 163|Homo sapiens ribosomal protein L30 i... 39 0.009 AF060926-1|AAG43138.1| 163|Homo sapiens My024 protein protein. 39 0.009 BC014576-1|AAH14576.1| 163|Homo sapiens chromosome 15 open read... 39 0.012 BC028672-1|AAH28672.1| 163|Homo sapiens chromosome 15 open read... 37 0.037 BC008499-1|AAH08499.1| 163|Homo sapiens chromosome 15 open read... 37 0.049 BC016588-1|AAH16588.1| 166|Homo sapiens DENND1B protein protein. 34 0.26 AL365258-7|CAI14215.1| 76|Homo sapiens DENN/MADD domain contai... 34 0.26 >M94314-1|AAC28251.1| 157|Homo sapiens ribosomal protein L30 protein. Length = 157 Score = 100 bits (239), Expect = 4e-21 Identities = 48/78 (61%), Positives = 54/78 (69%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250 R DGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE AI Sbjct: 23 RTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAI 82 Query: 249 VGASLSDIMAKRNMKPEV 196 GASL+DIMAKRN KPEV Sbjct: 83 TGASLADIMAKRNQKPEV 100 >CR456729-1|CAG33010.1| 157|Homo sapiens RPL24 protein. Length = 157 Score = 100 bits (239), Expect = 4e-21 Identities = 48/78 (61%), Positives = 54/78 (69%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250 R DGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE AI Sbjct: 23 RTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAI 82 Query: 249 VGASLSDIMAKRNMKPEV 196 GASL+DIMAKRN KPEV Sbjct: 83 TGASLADIMAKRNQKPEV 100 >BC070193-1|AAH70193.1| 157|Homo sapiens ribosomal protein L24 protein. Length = 157 Score = 100 bits (239), Expect = 4e-21 Identities = 48/78 (61%), Positives = 54/78 (69%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250 R DGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE AI Sbjct: 23 RTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAI 82 Query: 249 VGASLSDIMAKRNMKPEV 196 GASL+DIMAKRN KPEV Sbjct: 83 TGASLADIMAKRNQKPEV 100 >BC000690-1|AAH00690.1| 157|Homo sapiens ribosomal protein L24 protein. Length = 157 Score = 100 bits (239), Expect = 4e-21 Identities = 48/78 (61%), Positives = 54/78 (69%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250 R DGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE AI Sbjct: 23 RTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAI 82 Query: 249 VGASLSDIMAKRNMKPEV 196 GASL+DIMAKRN KPEV Sbjct: 83 TGASLADIMAKRNQKPEV 100 >AB061828-1|BAB79466.1| 157|Homo sapiens ribosomal protein L24 protein. Length = 157 Score = 100 bits (239), Expect = 4e-21 Identities = 48/78 (61%), Positives = 54/78 (69%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250 R DGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE AI Sbjct: 23 RTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAI 82 Query: 249 VGASLSDIMAKRNMKPEV 196 GASL+DIMAKRN KPEV Sbjct: 83 TGASLADIMAKRNQKPEV 100 >AL158815-1|CAI19461.1| 128|Homo sapiens se, the PEX6 gene for peroxisomal biogenesis factorA, member 8) protein. Length = 128 Score = 97.1 bits (231), Expect = 3e-20 Identities = 47/78 (60%), Positives = 52/78 (66%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250 R DGK F FLN+KCE A L +RNPR++ WTVLYRRK KKGQ EE AI Sbjct: 23 RTDGKVFQFLNAKCELAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAI 82 Query: 249 VGASLSDIMAKRNMKPEV 196 GASL+DI AKRN KPEV Sbjct: 83 TGASLADITAKRNQKPEV 100 >CR457179-1|CAG33460.1| 163|Homo sapiens C15orf15 protein. Length = 163 Score = 39.1 bits (87), Expect = 0.009 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >BC093067-1|AAH93067.1| 163|Homo sapiens chromosome 15 open reading frame 15 protein. Length = 163 Score = 39.1 bits (87), Expect = 0.009 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >BC035995-1|AAH35995.1| 163|Homo sapiens chromosome 15 open reading frame 15 protein. Length = 163 Score = 39.1 bits (87), Expect = 0.009 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >BC026267-1|AAH26267.1| 163|Homo sapiens chromosome 15 open reading frame 15 protein. Length = 163 Score = 39.1 bits (87), Expect = 0.009 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >BC026266-1|AAH26266.1| 163|Homo sapiens chromosome 15 open reading frame 15 protein. Length = 163 Score = 39.1 bits (87), Expect = 0.009 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >BC016777-1|AAH16777.1| 163|Homo sapiens chromosome 15 open reading frame 15 protein. Length = 163 Score = 39.1 bits (87), Expect = 0.009 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >BC016725-1|AAH16725.1| 163|Homo sapiens chromosome 15 open reading frame 15 protein. Length = 163 Score = 39.1 bits (87), Expect = 0.009 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >BC016331-1|AAH16331.1| 163|Homo sapiens chromosome 15 open reading frame 15 protein. Length = 163 Score = 39.1 bits (87), Expect = 0.009 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >BC016312-1|AAH16312.1| 163|Homo sapiens chromosome 15 open reading frame 15 protein. Length = 163 Score = 39.1 bits (87), Expect = 0.009 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >BC012913-1|AAH12913.1| 163|Homo sapiens chromosome 15 open reading frame 15 protein. Length = 163 Score = 39.1 bits (87), Expect = 0.009 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >BC009604-1|AAH09604.1| 163|Homo sapiens chromosome 15 open reading frame 15 protein. Length = 163 Score = 39.1 bits (87), Expect = 0.009 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >BC009593-1|AAH09593.1| 163|Homo sapiens chromosome 15 open reading frame 15 protein. Length = 163 Score = 39.1 bits (87), Expect = 0.009 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >BC008449-1|AAH08449.1| 163|Homo sapiens chromosome 15 open reading frame 15 protein. Length = 163 Score = 39.1 bits (87), Expect = 0.009 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >BC008422-1|AAH08422.1| 163|Homo sapiens chromosome 15 open reading frame 15 protein. Length = 163 Score = 39.1 bits (87), Expect = 0.009 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >BC008409-1|AAH08409.1| 163|Homo sapiens chromosome 15 open reading frame 15 protein. Length = 163 Score = 39.1 bits (87), Expect = 0.009 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >AF201949-1|AAF17241.1| 163|Homo sapiens 60S ribosomal protein L30 isolog protein. Length = 163 Score = 39.1 bits (87), Expect = 0.009 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >AF165521-1|AAF86651.1| 163|Homo sapiens ribosomal protein L30 isolog protein. Length = 163 Score = 39.1 bits (87), Expect = 0.009 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >AF060926-1|AAG43138.1| 163|Homo sapiens My024 protein protein. Length = 163 Score = 39.1 bits (87), Expect = 0.009 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >BC014576-1|AAH14576.1| 163|Homo sapiens chromosome 15 open reading frame 15 protein. Length = 163 Score = 38.7 bits (86), Expect = 0.012 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVFGFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >BC028672-1|AAH28672.1| 163|Homo sapiens chromosome 15 open reading frame 15 protein. Length = 163 Score = 37.1 bits (82), Expect = 0.037 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F F SKC +R+PRKV WT +R+ Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRDPRKVRWTKAFRK 57 >BC008499-1|AAH08499.1| 163|Homo sapiens chromosome 15 open reading frame 15 protein. Length = 163 Score = 36.7 bits (81), Expect = 0.049 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = -3 Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325 R D K F SKC +RNPRKV WT +R+ Sbjct: 23 RNDCKVIRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57 >BC016588-1|AAH16588.1| 166|Homo sapiens DENND1B protein protein. Length = 166 Score = 34.3 bits (75), Expect = 0.26 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +1 Query: 334 QDSPCYFTRIPPHQMGGFTF*IQECEGFSIHP 429 +DSP Y RIPP ++ F F I++ E F + P Sbjct: 118 EDSPAYLPRIPPGKVRRFAFCIKKLENFPVGP 149 >AL365258-7|CAI14215.1| 76|Homo sapiens DENN/MADD domain containing 1B protein. Length = 76 Score = 34.3 bits (75), Expect = 0.26 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +1 Query: 334 QDSPCYFTRIPPHQMGGFTF*IQECEGFSIHP 429 +DSP Y RIPP ++ F F I++ E F + P Sbjct: 28 EDSPAYLPRIPPGKVRRFAFCIKKLENFPVGP 59 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 57,875,602 Number of Sequences: 237096 Number of extensions: 1082099 Number of successful extensions: 2254 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 2219 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2251 length of database: 76,859,062 effective HSP length: 85 effective length of database: 56,705,902 effective search space used: 4990119376 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -