SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310A09f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M94314-1|AAC28251.1|  157|Homo sapiens ribosomal protein L30 pro...   100   4e-21
CR456729-1|CAG33010.1|  157|Homo sapiens RPL24 protein.               100   4e-21
BC070193-1|AAH70193.1|  157|Homo sapiens ribosomal protein L24 p...   100   4e-21
BC000690-1|AAH00690.1|  157|Homo sapiens ribosomal protein L24 p...   100   4e-21
AB061828-1|BAB79466.1|  157|Homo sapiens ribosomal protein L24 p...   100   4e-21
AL158815-1|CAI19461.1|  128|Homo sapiens se, the PEX6 gene for p...    97   3e-20
CR457179-1|CAG33460.1|  163|Homo sapiens C15orf15 protein.             39   0.009
BC093067-1|AAH93067.1|  163|Homo sapiens chromosome 15 open read...    39   0.009
BC035995-1|AAH35995.1|  163|Homo sapiens chromosome 15 open read...    39   0.009
BC026267-1|AAH26267.1|  163|Homo sapiens chromosome 15 open read...    39   0.009
BC026266-1|AAH26266.1|  163|Homo sapiens chromosome 15 open read...    39   0.009
BC016777-1|AAH16777.1|  163|Homo sapiens chromosome 15 open read...    39   0.009
BC016725-1|AAH16725.1|  163|Homo sapiens chromosome 15 open read...    39   0.009
BC016331-1|AAH16331.1|  163|Homo sapiens chromosome 15 open read...    39   0.009
BC016312-1|AAH16312.1|  163|Homo sapiens chromosome 15 open read...    39   0.009
BC012913-1|AAH12913.1|  163|Homo sapiens chromosome 15 open read...    39   0.009
BC009604-1|AAH09604.1|  163|Homo sapiens chromosome 15 open read...    39   0.009
BC009593-1|AAH09593.1|  163|Homo sapiens chromosome 15 open read...    39   0.009
BC008449-1|AAH08449.1|  163|Homo sapiens chromosome 15 open read...    39   0.009
BC008422-1|AAH08422.1|  163|Homo sapiens chromosome 15 open read...    39   0.009
BC008409-1|AAH08409.1|  163|Homo sapiens chromosome 15 open read...    39   0.009
AF201949-1|AAF17241.1|  163|Homo sapiens 60S ribosomal protein L...    39   0.009
AF165521-1|AAF86651.1|  163|Homo sapiens ribosomal protein L30 i...    39   0.009
AF060926-1|AAG43138.1|  163|Homo sapiens My024 protein protein.        39   0.009
BC014576-1|AAH14576.1|  163|Homo sapiens chromosome 15 open read...    39   0.012
BC028672-1|AAH28672.1|  163|Homo sapiens chromosome 15 open read...    37   0.037
BC008499-1|AAH08499.1|  163|Homo sapiens chromosome 15 open read...    37   0.049
BC016588-1|AAH16588.1|  166|Homo sapiens DENND1B protein protein.      34   0.26 
AL365258-7|CAI14215.1|   76|Homo sapiens DENN/MADD domain contai...    34   0.26 

>M94314-1|AAC28251.1|  157|Homo sapiens ribosomal protein L30
           protein.
          Length = 157

 Score =  100 bits (239), Expect = 4e-21
 Identities = 48/78 (61%), Positives = 54/78 (69%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250
           R DGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE              AI
Sbjct: 23  RTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAI 82

Query: 249 VGASLSDIMAKRNMKPEV 196
            GASL+DIMAKRN KPEV
Sbjct: 83  TGASLADIMAKRNQKPEV 100


>CR456729-1|CAG33010.1|  157|Homo sapiens RPL24 protein.
          Length = 157

 Score =  100 bits (239), Expect = 4e-21
 Identities = 48/78 (61%), Positives = 54/78 (69%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250
           R DGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE              AI
Sbjct: 23  RTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAI 82

Query: 249 VGASLSDIMAKRNMKPEV 196
            GASL+DIMAKRN KPEV
Sbjct: 83  TGASLADIMAKRNQKPEV 100


>BC070193-1|AAH70193.1|  157|Homo sapiens ribosomal protein L24
           protein.
          Length = 157

 Score =  100 bits (239), Expect = 4e-21
 Identities = 48/78 (61%), Positives = 54/78 (69%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250
           R DGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE              AI
Sbjct: 23  RTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAI 82

Query: 249 VGASLSDIMAKRNMKPEV 196
            GASL+DIMAKRN KPEV
Sbjct: 83  TGASLADIMAKRNQKPEV 100


>BC000690-1|AAH00690.1|  157|Homo sapiens ribosomal protein L24
           protein.
          Length = 157

 Score =  100 bits (239), Expect = 4e-21
 Identities = 48/78 (61%), Positives = 54/78 (69%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250
           R DGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE              AI
Sbjct: 23  RTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAI 82

Query: 249 VGASLSDIMAKRNMKPEV 196
            GASL+DIMAKRN KPEV
Sbjct: 83  TGASLADIMAKRNQKPEV 100


>AB061828-1|BAB79466.1|  157|Homo sapiens ribosomal protein L24
           protein.
          Length = 157

 Score =  100 bits (239), Expect = 4e-21
 Identities = 48/78 (61%), Positives = 54/78 (69%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250
           R DGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE              AI
Sbjct: 23  RTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAI 82

Query: 249 VGASLSDIMAKRNMKPEV 196
            GASL+DIMAKRN KPEV
Sbjct: 83  TGASLADIMAKRNQKPEV 100


>AL158815-1|CAI19461.1|  128|Homo sapiens se, the PEX6 gene for
           peroxisomal biogenesis factorA, member 8) protein.
          Length = 128

 Score = 97.1 bits (231), Expect = 3e-20
 Identities = 47/78 (60%), Positives = 52/78 (66%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250
           R DGK F FLN+KCE A L +RNPR++ WTVLYRRK KKGQ EE              AI
Sbjct: 23  RTDGKVFQFLNAKCELAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAI 82

Query: 249 VGASLSDIMAKRNMKPEV 196
            GASL+DI AKRN KPEV
Sbjct: 83  TGASLADITAKRNQKPEV 100


>CR457179-1|CAG33460.1|  163|Homo sapiens C15orf15 protein.
          Length = 163

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>BC093067-1|AAH93067.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>BC035995-1|AAH35995.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>BC026267-1|AAH26267.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>BC026266-1|AAH26266.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>BC016777-1|AAH16777.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>BC016725-1|AAH16725.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>BC016331-1|AAH16331.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>BC016312-1|AAH16312.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>BC012913-1|AAH12913.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>BC009604-1|AAH09604.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>BC009593-1|AAH09593.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>BC008449-1|AAH08449.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>BC008422-1|AAH08422.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>BC008409-1|AAH08409.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>AF201949-1|AAF17241.1|  163|Homo sapiens 60S ribosomal protein L30
           isolog protein.
          Length = 163

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>AF165521-1|AAF86651.1|  163|Homo sapiens ribosomal protein L30
           isolog protein.
          Length = 163

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>AF060926-1|AAG43138.1|  163|Homo sapiens My024 protein protein.
          Length = 163

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>BC014576-1|AAH14576.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 38.7 bits (86), Expect = 0.012
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVFGFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>BC028672-1|AAH28672.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 37.1 bits (82), Expect = 0.037
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K F F  SKC      +R+PRKV WT  +R+
Sbjct: 23  RNDCKVFRFCKSKCHKNFKKKRDPRKVRWTKAFRK 57


>BC008499-1|AAH08499.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 36.7 bits (81), Expect = 0.049
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -3

Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
           R D K   F  SKC      +RNPRKV WT  +R+
Sbjct: 23  RNDCKVIRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57


>BC016588-1|AAH16588.1|  166|Homo sapiens DENND1B protein protein.
          Length = 166

 Score = 34.3 bits (75), Expect = 0.26
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 334 QDSPCYFTRIPPHQMGGFTF*IQECEGFSIHP 429
           +DSP Y  RIPP ++  F F I++ E F + P
Sbjct: 118 EDSPAYLPRIPPGKVRRFAFCIKKLENFPVGP 149


>AL365258-7|CAI14215.1|   76|Homo sapiens DENN/MADD domain
           containing 1B protein.
          Length = 76

 Score = 34.3 bits (75), Expect = 0.26
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 334 QDSPCYFTRIPPHQMGGFTF*IQECEGFSIHP 429
           +DSP Y  RIPP ++  F F I++ E F + P
Sbjct: 28  EDSPAYLPRIPPGKVRRFAFCIKKLENFPVGP 59


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,875,602
Number of Sequences: 237096
Number of extensions: 1082099
Number of successful extensions: 2254
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2251
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -