BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310A09f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M94314-1|AAC28251.1| 157|Homo sapiens ribosomal protein L30 pro... 100 4e-21
CR456729-1|CAG33010.1| 157|Homo sapiens RPL24 protein. 100 4e-21
BC070193-1|AAH70193.1| 157|Homo sapiens ribosomal protein L24 p... 100 4e-21
BC000690-1|AAH00690.1| 157|Homo sapiens ribosomal protein L24 p... 100 4e-21
AB061828-1|BAB79466.1| 157|Homo sapiens ribosomal protein L24 p... 100 4e-21
AL158815-1|CAI19461.1| 128|Homo sapiens se, the PEX6 gene for p... 97 3e-20
CR457179-1|CAG33460.1| 163|Homo sapiens C15orf15 protein. 39 0.009
BC093067-1|AAH93067.1| 163|Homo sapiens chromosome 15 open read... 39 0.009
BC035995-1|AAH35995.1| 163|Homo sapiens chromosome 15 open read... 39 0.009
BC026267-1|AAH26267.1| 163|Homo sapiens chromosome 15 open read... 39 0.009
BC026266-1|AAH26266.1| 163|Homo sapiens chromosome 15 open read... 39 0.009
BC016777-1|AAH16777.1| 163|Homo sapiens chromosome 15 open read... 39 0.009
BC016725-1|AAH16725.1| 163|Homo sapiens chromosome 15 open read... 39 0.009
BC016331-1|AAH16331.1| 163|Homo sapiens chromosome 15 open read... 39 0.009
BC016312-1|AAH16312.1| 163|Homo sapiens chromosome 15 open read... 39 0.009
BC012913-1|AAH12913.1| 163|Homo sapiens chromosome 15 open read... 39 0.009
BC009604-1|AAH09604.1| 163|Homo sapiens chromosome 15 open read... 39 0.009
BC009593-1|AAH09593.1| 163|Homo sapiens chromosome 15 open read... 39 0.009
BC008449-1|AAH08449.1| 163|Homo sapiens chromosome 15 open read... 39 0.009
BC008422-1|AAH08422.1| 163|Homo sapiens chromosome 15 open read... 39 0.009
BC008409-1|AAH08409.1| 163|Homo sapiens chromosome 15 open read... 39 0.009
AF201949-1|AAF17241.1| 163|Homo sapiens 60S ribosomal protein L... 39 0.009
AF165521-1|AAF86651.1| 163|Homo sapiens ribosomal protein L30 i... 39 0.009
AF060926-1|AAG43138.1| 163|Homo sapiens My024 protein protein. 39 0.009
BC014576-1|AAH14576.1| 163|Homo sapiens chromosome 15 open read... 39 0.012
BC028672-1|AAH28672.1| 163|Homo sapiens chromosome 15 open read... 37 0.037
BC008499-1|AAH08499.1| 163|Homo sapiens chromosome 15 open read... 37 0.049
BC016588-1|AAH16588.1| 166|Homo sapiens DENND1B protein protein. 34 0.26
AL365258-7|CAI14215.1| 76|Homo sapiens DENN/MADD domain contai... 34 0.26
>M94314-1|AAC28251.1| 157|Homo sapiens ribosomal protein L30
protein.
Length = 157
Score = 100 bits (239), Expect = 4e-21
Identities = 48/78 (61%), Positives = 54/78 (69%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250
R DGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE AI
Sbjct: 23 RTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAI 82
Query: 249 VGASLSDIMAKRNMKPEV 196
GASL+DIMAKRN KPEV
Sbjct: 83 TGASLADIMAKRNQKPEV 100
>CR456729-1|CAG33010.1| 157|Homo sapiens RPL24 protein.
Length = 157
Score = 100 bits (239), Expect = 4e-21
Identities = 48/78 (61%), Positives = 54/78 (69%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250
R DGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE AI
Sbjct: 23 RTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAI 82
Query: 249 VGASLSDIMAKRNMKPEV 196
GASL+DIMAKRN KPEV
Sbjct: 83 TGASLADIMAKRNQKPEV 100
>BC070193-1|AAH70193.1| 157|Homo sapiens ribosomal protein L24
protein.
Length = 157
Score = 100 bits (239), Expect = 4e-21
Identities = 48/78 (61%), Positives = 54/78 (69%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250
R DGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE AI
Sbjct: 23 RTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAI 82
Query: 249 VGASLSDIMAKRNMKPEV 196
GASL+DIMAKRN KPEV
Sbjct: 83 TGASLADIMAKRNQKPEV 100
>BC000690-1|AAH00690.1| 157|Homo sapiens ribosomal protein L24
protein.
Length = 157
Score = 100 bits (239), Expect = 4e-21
Identities = 48/78 (61%), Positives = 54/78 (69%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250
R DGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE AI
Sbjct: 23 RTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAI 82
Query: 249 VGASLSDIMAKRNMKPEV 196
GASL+DIMAKRN KPEV
Sbjct: 83 TGASLADIMAKRNQKPEV 100
>AB061828-1|BAB79466.1| 157|Homo sapiens ribosomal protein L24
protein.
Length = 157
Score = 100 bits (239), Expect = 4e-21
Identities = 48/78 (61%), Positives = 54/78 (69%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250
R DGK F FLN+KCE+A L +RNPR++ WTVLYRRK KKGQ EE AI
Sbjct: 23 RTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAI 82
Query: 249 VGASLSDIMAKRNMKPEV 196
GASL+DIMAKRN KPEV
Sbjct: 83 TGASLADIMAKRNQKPEV 100
>AL158815-1|CAI19461.1| 128|Homo sapiens se, the PEX6 gene for
peroxisomal biogenesis factorA, member 8) protein.
Length = 128
Score = 97.1 bits (231), Expect = 3e-20
Identities = 47/78 (60%), Positives = 52/78 (66%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAI 250
R DGK F FLN+KCE A L +RNPR++ WTVLYRRK KKGQ EE AI
Sbjct: 23 RTDGKVFQFLNAKCELAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAI 82
Query: 249 VGASLSDIMAKRNMKPEV 196
GASL+DI AKRN KPEV
Sbjct: 83 TGASLADITAKRNQKPEV 100
>CR457179-1|CAG33460.1| 163|Homo sapiens C15orf15 protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>BC093067-1|AAH93067.1| 163|Homo sapiens chromosome 15 open reading
frame 15 protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>BC035995-1|AAH35995.1| 163|Homo sapiens chromosome 15 open reading
frame 15 protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>BC026267-1|AAH26267.1| 163|Homo sapiens chromosome 15 open reading
frame 15 protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>BC026266-1|AAH26266.1| 163|Homo sapiens chromosome 15 open reading
frame 15 protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>BC016777-1|AAH16777.1| 163|Homo sapiens chromosome 15 open reading
frame 15 protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>BC016725-1|AAH16725.1| 163|Homo sapiens chromosome 15 open reading
frame 15 protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>BC016331-1|AAH16331.1| 163|Homo sapiens chromosome 15 open reading
frame 15 protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>BC016312-1|AAH16312.1| 163|Homo sapiens chromosome 15 open reading
frame 15 protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>BC012913-1|AAH12913.1| 163|Homo sapiens chromosome 15 open reading
frame 15 protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>BC009604-1|AAH09604.1| 163|Homo sapiens chromosome 15 open reading
frame 15 protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>BC009593-1|AAH09593.1| 163|Homo sapiens chromosome 15 open reading
frame 15 protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>BC008449-1|AAH08449.1| 163|Homo sapiens chromosome 15 open reading
frame 15 protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>BC008422-1|AAH08422.1| 163|Homo sapiens chromosome 15 open reading
frame 15 protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>BC008409-1|AAH08409.1| 163|Homo sapiens chromosome 15 open reading
frame 15 protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>AF201949-1|AAF17241.1| 163|Homo sapiens 60S ribosomal protein L30
isolog protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>AF165521-1|AAF86651.1| 163|Homo sapiens ribosomal protein L30
isolog protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>AF060926-1|AAG43138.1| 163|Homo sapiens My024 protein protein.
Length = 163
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>BC014576-1|AAH14576.1| 163|Homo sapiens chromosome 15 open reading
frame 15 protein.
Length = 163
Score = 38.7 bits (86), Expect = 0.012
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVFGFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>BC028672-1|AAH28672.1| 163|Homo sapiens chromosome 15 open reading
frame 15 protein.
Length = 163
Score = 37.1 bits (82), Expect = 0.037
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F F SKC +R+PRKV WT +R+
Sbjct: 23 RNDCKVFRFCKSKCHKNFKKKRDPRKVRWTKAFRK 57
>BC008499-1|AAH08499.1| 163|Homo sapiens chromosome 15 open reading
frame 15 protein.
Length = 163
Score = 36.7 bits (81), Expect = 0.049
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -3
Query: 429 RVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 325
R D K F SKC +RNPRKV WT +R+
Sbjct: 23 RNDCKVIRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>BC016588-1|AAH16588.1| 166|Homo sapiens DENND1B protein protein.
Length = 166
Score = 34.3 bits (75), Expect = 0.26
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 334 QDSPCYFTRIPPHQMGGFTF*IQECEGFSIHP 429
+DSP Y RIPP ++ F F I++ E F + P
Sbjct: 118 EDSPAYLPRIPPGKVRRFAFCIKKLENFPVGP 149
>AL365258-7|CAI14215.1| 76|Homo sapiens DENN/MADD domain
containing 1B protein.
Length = 76
Score = 34.3 bits (75), Expect = 0.26
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 334 QDSPCYFTRIPPHQMGGFTF*IQECEGFSIHP 429
+DSP Y RIPP ++ F F I++ E F + P
Sbjct: 28 EDSPAYLPRIPPGKVRRFAFCIKKLENFPVGP 59
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,875,602
Number of Sequences: 237096
Number of extensions: 1082099
Number of successful extensions: 2254
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2251
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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