Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310A08f
         (415 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    23   5.8  
EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       22   7.7  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    22   7.7  

>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +2

Query: 194 HQNLPSCF-STHKSRINEYGKKYLIPSHIPVIYPRNFQAI 310
           HQ+L     +T KS    YG +Y   + I  IYP +  ++
Sbjct: 332 HQDLNEIAEATVKSLAKRYGTQYKYGNVIDAIYPASGSSV 371


>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 72  VDASTLLIPRIVNNRKHNWKY 10
           +DAST L+   V N K  WK+
Sbjct: 246 LDASTRLLMASVINFKGKWKF 266


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 173  SPFAVRNYPNRLKFLQRLYR 114
            SP  VR    R  +LQRLYR
Sbjct: 1129 SPRTVRARHERRLYLQRLYR 1148


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 409,746
Number of Sequences: 2352
Number of extensions: 7836
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)