Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310A08f
         (415 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00063-9|AAK18957.1|  333|Caenorhabditis elegans Yeast glc seven...    27   4.1  
AL031630-15|CAA20994.1|  244|Caenorhabditis elegans Hypothetical...    26   9.4  

>U00063-9|AAK18957.1|  333|Caenorhabditis elegans Yeast glc
           seven-like phosphatasesprotein 2 protein.
          Length = 333

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 46  WYKQCGSIYRLRLW*LFGYCFRC 114
           +Y +C   Y ++LW  F  CF C
Sbjct: 135 FYDECKRRYNIKLWKTFTDCFNC 157


>AL031630-15|CAA20994.1|  244|Caenorhabditis elegans Hypothetical
           protein Y38H6C.16 protein.
          Length = 244

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -1

Query: 361 LHLYNNETVN*YF*LILYSLEVSWIDDRY-MGWNEIFFSIFIYSRLV 224
           LHL    T    F  IL  LE+  I   + +GW  +FF IF++  ++
Sbjct: 3   LHLLYYPTTLKVFQKILKILEILEIKKFWKLGWKILFFGIFLFLTII 49


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,948,226
Number of Sequences: 27780
Number of extensions: 173292
Number of successful extensions: 367
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)