Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309H12f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    25   0.54 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   1.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.2  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   5.0  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   6.6  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -2

Query: 115 LVKHVWIGAICFECKMYNLKFKNDQYFIFTRVCSFMD 5
           L   +W  +  F  ++++     D Y I+TR+ SF D
Sbjct: 522 LETRIWPRSAAFAERIWSDPSAGDDYDIYTRLVSFSD 558


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 233 KQSIHDKFGFLFLHLVR*CFSTLGF 159
           K+  +  FG +F+ L+  CFS L +
Sbjct: 142 KKIRYSAFGMIFVALLEHCFSMLNY 166


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 448 VYCYACLLSQ*FYVHFEVH 392
           V+CY   L   +Y+++ VH
Sbjct: 146 VFCYFIYLFTVYYIYYSVH 164


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -1

Query: 365 NISTQAFCFFSPFFSLAVKPFPEY 294
           N++ Q    + PF+    +P+P Y
Sbjct: 243 NLTCQPAVPYVPFYRYCYRPYPVY 266


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +1

Query: 304 KGFTAKEKKGEKKQNAWVEMLQSVLDEQKSAPQNVRRIIETISKHNNT 447
           K   AK ++ +K+ N    + +S   + KSAP   +     +S +NNT
Sbjct: 118 KNRRAKCRQQQKQHNQQQSVEKSSKLKNKSAPILTKTSPTPVSINNNT 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,001
Number of Sequences: 336
Number of extensions: 3033
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)