Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309H12f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46787-8|CAA86746.1| 253|Caenorhabditis elegans Hypothetical pr... 117 6e-27
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 31 0.38
Z81500-9|CAB04098.2| 141|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z46676-6|CAA86666.1| 503|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical ... 30 1.2
Z77665-9|CAB01223.2| 729|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81037-6|CAB02748.2| 414|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z79755-8|CAB02113.1| 270|Caenorhabditis elegans Hypothetical pr... 28 4.7
U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF169201-1|AAF01678.1| 270|Caenorhabditis elegans CES-1 protein. 28 4.7
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 27 6.2
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z78416-7|CAI79151.1| 212|Caenorhabditis elegans Hypothetical pr... 27 8.1
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 27 8.1
L23646-9|AAM48529.1| 379|Caenorhabditis elegans Hypothetical pr... 27 8.1
L23646-8|AAM48530.1| 411|Caenorhabditis elegans Hypothetical pr... 27 8.1
L23646-7|AAA28038.3| 471|Caenorhabditis elegans Hypothetical pr... 27 8.1
L23646-6|AAU87821.1| 469|Caenorhabditis elegans Hypothetical pr... 27 8.1
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 8.1
AC084152-9|AAK39313.1| 296|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z46787-8|CAA86746.1| 253|Caenorhabditis elegans Hypothetical
protein C16C10.8 protein.
Length = 253
Score = 117 bits (281), Expect = 6e-27
Identities = 52/125 (41%), Positives = 82/125 (65%)
Frame = +1
Query: 118 MVVFTCSHCGESVQKPKVEKHYLTKCRNKNPNLSCMDCFKDFLGKDYESHIKCITEEERY 297
MV F+C++CGE+ +K +VE+H L +CRN SC+DC + + Y+ H+KCITE ++Y
Sbjct: 1 MVFFSCNNCGEACKKNQVERH-LFQCRNTT--FSCIDCQLVYTRETYKDHVKCITENQKY 57
Query: 298 SGKGFTAKEKKGEKKQNAWVEMLQSVLDEQKSAPQNVRRIIETISKHNNTPRKKPKFINF 477
GK + KE KGE KQNAWV+ + ++ + V+ ++++++ N PRK+ KFINF
Sbjct: 58 GGKNYVEKENKGEAKQNAWVDQVNRAIEFVTDS--QVKELLKSVAGFANIPRKEAKFINF 115
Query: 478 VKNVC 492
+ N C
Sbjct: 116 LTNSC 120
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +1
Query: 235 KDFLGKDYESHIKCITEEERYSGKGFTAKEKKGEKKQNAWVEMLQSVLDEQKSAPQNVRR 414
K+ K E H+ + E ++ K T K+++ EK + + Q+ D+QK + ++
Sbjct: 150 KEEKNKQREKHLATHKKAEEFARKVRTDKDEQREKHLDTHKKAEQNAQDDQKYHDEARKK 209
Query: 415 IIETISKHNNTPRKK 459
IET K K+
Sbjct: 210 YIETQKKAEENEEKR 224
>Z81500-9|CAB04098.2| 141|Caenorhabditis elegans Hypothetical
protein F11D11.6 protein.
Length = 141
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -3
Query: 159 LNRLPTMTACKNNHFL*NTCGLGLFVLNAKCI 64
L T+ CKN F+ N C L LFV++ KCI
Sbjct: 43 LTAFKTVGECKNGCFVKNDCFLALFVID-KCI 73
>Z46676-6|CAA86666.1| 503|Caenorhabditis elegans Hypothetical
protein C08B11.8 protein.
Length = 503
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 147 PTMTACKNNHFL*NTCGLGLFVLNAKCITLNLKMI-SILF 31
P++ N HF N+ LGLF+ +T N +I SILF
Sbjct: 192 PSLLVIDNGHFQYNSISLGLFLATYMFLTKNFTIIGSILF 231
>AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 699
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 136 SHCGESVQKPKVEKHYLTKCRNKNPNLSCMDCFKDFLGKDYESH 267
S+ G+ V+ ++ K + +C N N +L C+ C + G++ H
Sbjct: 37 SNRGKVVKNQEIIKTFCDECDNCNKSLMCLTCGRILCGRNDSGH 80
>Z77665-9|CAB01223.2| 729|Caenorhabditis elegans Hypothetical
protein K02E11.1 protein.
Length = 729
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 227 TVSKIF*EKIMNRISSALLKKKDTLEKVSQLRRKRVRKNKMLGSRCCSQF*MSKKVHLKM 406
T SKI I+ + + +K+K L + +RKR +KN + ++ MS K H K
Sbjct: 79 TTSKIPKRAILFCVMTDTVKEKSALCAIIATKRKRTKKNNK-PIQIIAELRMSTKFHFKR 137
Query: 407 YVELLRQ 427
E++ +
Sbjct: 138 VFEIVEK 144
>Z81037-6|CAB02748.2| 414|Caenorhabditis elegans Hypothetical
protein C17E4.10 protein.
Length = 414
Score = 27.9 bits (59), Expect = 4.7
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Frame = +1
Query: 145 GESVQKPKVEKHYLTKCRNKN-PNLSCMDCFKDFLGKDYESHIKCITEEERYSGKGFTAK 321
G + P+ E+ L K+ P LS F DF + E EE+ + T +
Sbjct: 80 GAPIATPEDEEQLLDDLEIKSAPLLSPRRTFADFEDRSSEEKENRRIEEDDDTEADTTIR 139
Query: 322 EKKGEKKQNAWVEMLQSVLDEQKSAPQNVRRIIETISKHNNTPRKKPKFINFVKN 486
E+ +K+ + VL E+K + +ET+ +H + P FI V++
Sbjct: 140 EEFDYEKE-------EEVLKEEKIID---KPNVETVEEHKENKNESPDFIRMVES 184
>Z79755-8|CAB02113.1| 270|Caenorhabditis elegans Hypothetical
protein F43G9.11 protein.
Length = 270
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 127 FTCSHCGES-VQKPKVEKHYLTKCRNKNPNLSCMDCFKDFLGKDY 258
F+C+HCG+S + + H LT +K C C + F + Y
Sbjct: 219 FSCAHCGKSFADRSNLRAHMLTHTGDK--RFECDKCGRRFALRAY 261
>U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical
protein F48E3.4 protein.
Length = 279
Score = 27.9 bits (59), Expect = 4.7
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +2
Query: 131 HAVIVGSLFRSPKWKSIISLNVGIKTQICHVWTVSKIF*EKIMNRISSALLKKKDT 298
H +V L + K K+I S G V T SK F + N I+ A++KKKD+
Sbjct: 28 HQYLVKVLTKDTKLKNI-STCTGTLLSPSVVLTSSKCFPDTRKNLIAQAIIKKKDS 82
>AF169201-1|AAF01678.1| 270|Caenorhabditis elegans CES-1 protein.
Length = 270
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 127 FTCSHCGES-VQKPKVEKHYLTKCRNKNPNLSCMDCFKDFLGKDY 258
F+C+HCG+S + + H LT +K C C + F + Y
Sbjct: 219 FSCAHCGKSFADRSNLRAHMLTHTGDK--RFECDKCGRRFALRAY 261
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 133 CSHCGESVQKPKVEKHYLTKCRNKNPNLSC 222
CS C +S Q+ V++ Y + N++ NL C
Sbjct: 179 CSQCQQSCQQQCVQQQYSVQQCNQHCNLEC 208
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical
protein F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +1
Query: 301 GKGFTAKEKKGEKKQNAWVEMLQSVLDEQKSAPQNVRRIIETISKHNNTPRKKPKFINFV 480
G G ++E K W+E + V++E P N RR I K + + K + F+
Sbjct: 805 GNGNGSEEAAVAAKIEQWIEAVDKVINELSQLPVNERR--SRIDKLEQQLQVQDKNVGFI 862
Query: 481 K 483
+
Sbjct: 863 E 863
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical
protein F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +1
Query: 301 GKGFTAKEKKGEKKQNAWVEMLQSVLDEQKSAPQNVRRIIETISKHNNTPRKKPKFINFV 480
G G ++E K W+E + V++E P N RR I K + + K + F+
Sbjct: 805 GNGNGSEEAAVAAKIEQWIEAVDKVINELSQLPVNERR--SRIDKLEQQLQVQDKNVGFI 862
Query: 481 K 483
+
Sbjct: 863 E 863
>Z78416-7|CAI79151.1| 212|Caenorhabditis elegans Hypothetical
protein C23H4.8 protein.
Length = 212
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/55 (27%), Positives = 21/55 (38%)
Frame = +1
Query: 139 HCGESVQKPKVEKHYLTKCRNKNPNLSCMDCFKDFLGKDYESHIKCITEEERYSG 303
H + + KV + C N P +C DF+GK E C T +G
Sbjct: 44 HHHHRIHRGKVHRKRQPVCLNGKPVDGVCECELDFVGKHCEKKKNCRTYRRYKNG 98
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 6/29 (20%)
Frame = +1
Query: 130 TCSHCGESVQKPK------VEKHYLTKCR 198
TCSHC +KP+ ++K YL CR
Sbjct: 112 TCSHCHNDAKKPRFCVTCGLQKKYLMMCR 140
>L23646-9|AAM48529.1| 379|Caenorhabditis elegans Hypothetical
protein F44E2.7b protein.
Length = 379
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +1
Query: 259 ESHIKCITEEERYSGKGFTAKEKKGEKKQNAWVEMLQSVLDEQKSAPQNVRRIIE 423
E H K + E+ R + + K K EKK+ +++ DE+K +++R+ ++
Sbjct: 43 EKHRKLLEEQRRKAEAEYERKRKADEKKKE------KAIKDEEKRKAEDLRKCLQ 91
>L23646-8|AAM48530.1| 411|Caenorhabditis elegans Hypothetical
protein F44E2.7c protein.
Length = 411
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +1
Query: 259 ESHIKCITEEERYSGKGFTAKEKKGEKKQNAWVEMLQSVLDEQKSAPQNVRRIIE 423
E H K + E+ R + + K K EKK+ +++ DE+K +++R+ ++
Sbjct: 75 EKHRKLLEEQRRKAEAEYERKRKADEKKKE------KAIKDEEKRKAEDLRKCLQ 123
>L23646-7|AAA28038.3| 471|Caenorhabditis elegans Hypothetical
protein F44E2.7a protein.
Length = 471
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +1
Query: 259 ESHIKCITEEERYSGKGFTAKEKKGEKKQNAWVEMLQSVLDEQKSAPQNVRRIIE 423
E H K + E+ R + + K K EKK+ +++ DE+K +++R+ ++
Sbjct: 135 EKHRKLLEEQRRKAEAEYERKRKADEKKKE------KAIKDEEKRKAEDLRKCLQ 183
>L23646-6|AAU87821.1| 469|Caenorhabditis elegans Hypothetical
protein F44E2.7d protein.
Length = 469
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +1
Query: 259 ESHIKCITEEERYSGKGFTAKEKKGEKKQNAWVEMLQSVLDEQKSAPQNVRRIIE 423
E H K + E+ R + + K K EKK+ +++ DE+K +++R+ ++
Sbjct: 133 EKHRKLLEEQRRKAEAEYERKRKADEKKKE------KAIKDEEKRKAEDLRKCLQ 181
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +1
Query: 301 GKGFTAKEKKGEKKQNAWVEMLQSVLDEQKSAPQNVRRIIETISKHNNTPRKKPKFINFV 480
G G ++E K W+E + V++E P N RR I K + + K + F+
Sbjct: 805 GNGNGSEEAAVAAKIEQWIEAVDKVINELSQLPVNERR--SRIDKLEQQLQVQDKNVGFI 862
Query: 481 K 483
+
Sbjct: 863 E 863
>AC084152-9|AAK39313.1| 296|Caenorhabditis elegans Hypothetical
protein Y102A11A.1 protein.
Length = 296
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 87 FVLNAKCITLNLKMISILFSLVYVVLW 7
F + A CITL ++ +F L+Y LW
Sbjct: 20 FAIIASCITLAFQLTFSIFFLIYGQLW 46
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,837,118
Number of Sequences: 27780
Number of extensions: 281736
Number of successful extensions: 1063
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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