Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309H10f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1NRW4 Cluster: Phospholipase D/Transphosphatidylase; n...    34   1.7  
UniRef50_Q0JME1 Cluster: Os01g0511600 protein; n=1; Oryza sativa...    33   3.0  
UniRef50_UPI0000ECCB92 Cluster: Voltage-gated sodium channel H; ...    33   5.2  
UniRef50_Q6PEG8 Cluster: Serine/arginine repetitive matrix 1; n=...    33   5.2  
UniRef50_Q10PL1 Cluster: Expressed protein; n=1; Oryza sativa (j...    33   5.2  
UniRef50_Q2AC95 Cluster: HpaH; n=4; Acidovorax avenae|Rep: HpaH ...    32   6.9  
UniRef50_Q011M5 Cluster: Mismatch repair ATPase MSH4; n=2; Ostre...    32   6.9  
UniRef50_UPI0000EB1B91 Cluster: junctional sarcoplasmic reticulu...    32   9.2  
UniRef50_Q19Q26 Cluster: CG1648-like; n=1; Belgica antarctica|Re...    32   9.2  

>UniRef50_Q1NRW4 Cluster: Phospholipase D/Transphosphatidylase; n=2;
           delta proteobacterium MLMS-1|Rep: Phospholipase
           D/Transphosphatidylase - delta proteobacterium MLMS-1
          Length = 435

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 21/59 (35%), Positives = 30/59 (50%)
 Frame = +1

Query: 4   CSAESQAHFVASARRLHLSSTGRRRMQSNLPPRRHRKPPTL*KTRSRRRASLLVEPRNP 180
           C A+ Q  F    +R   +  GRRR+Q  LPP + +K   L + R +R A+    PR P
Sbjct: 185 CVADWQTAFAQVWKR---TRGGRRRLQPPLPPGQPKKTRLLPRRRQKRAAAGSAAPREP 240


>UniRef50_Q0JME1 Cluster: Os01g0511600 protein; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: Os01g0511600 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 292

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
 Frame = +1

Query: 7   SAESQAHFVASARRLH-------LSSTGRRRMQSNLPPRRHRKPPTL*KTRSRRRASLLV 165
           S+ S    +AS R  H        ++T   R+++ LPPRR R+ P+   + SR+ A++ +
Sbjct: 5   SSSSSPCMIASLRSSHRCRLSPSATATSPPRLRT-LPPRRCRRNPSSSSSSSRQAAAISM 63

Query: 166 EPRNPPTMLLAQL 204
            P NP   L+A +
Sbjct: 64  APANPRHRLIAPI 76


>UniRef50_UPI0000ECCB92 Cluster: Voltage-gated sodium channel H; n=8;
            Gallus gallus|Rep: Voltage-gated sodium channel H -
            Gallus gallus
          Length = 2032

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 273  PCCKATLSKVPGR-WRRLRSAWHRQLS*QHRW 181
            PCC   +SK PG+ W RLR   +R +  +H W
Sbjct: 1194 PCCSVDISKFPGKIWWRLRKTCYRIV--EHNW 1223


>UniRef50_Q6PEG8 Cluster: Serine/arginine repetitive matrix 1; n=2;
           Danio rerio|Rep: Serine/arginine repetitive matrix 1 -
           Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 896

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +1

Query: 19  QAHFVASARRLHLSSTGRRRMQSNLPPRRHRKPPTL*KTRSRRRASLLVEPRNPP 183
           ++H  AS RR H  ++ R+R   + P RRHR    + + RS         P  PP
Sbjct: 480 RSHSPASPRRRHRDASPRKRRSPSPPGRRHRSQSPVRRRRSPSPPPRRRSPSPPP 534


>UniRef50_Q10PL1 Cluster: Expressed protein; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: Expressed protein - Oryza
           sativa subsp. japonica (Rice)
          Length = 256

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 24/54 (44%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
 Frame = -3

Query: 186 RWRISRLHQ*ARPPS*PGLLQRGRLPVPSRRQVALH----PSSSCRREMQSSRR 37
           R R  R H+ + PPS P   +      P RRQ+  H    P SSCRRE  SSRR
Sbjct: 108 RRRQIRRHRCSLPPSSPRRGEGSSRRAP-RRQIRRHRYSPPPSSCRREEGSSRR 160


>UniRef50_Q2AC95 Cluster: HpaH; n=4; Acidovorax avenae|Rep: HpaH -
           Acidovorax avenae subsp. avenae
          Length = 678

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = -3

Query: 186 RWRISRLHQ*ARPPS*PGLLQRGRLPVPSRRQVALHPSSSCRREMQSSRR 37
           RW  +R  + + PP+ PGLL    LP+PSRR+   +  S     + S++R
Sbjct: 69  RW--ARSPRASGPPALPGLLLPFPLPLPSRREAPANARSDAMTPLSSTQR 116


>UniRef50_Q011M5 Cluster: Mismatch repair ATPase MSH4; n=2;
           Ostreococcus|Rep: Mismatch repair ATPase MSH4 -
           Ostreococcus tauri
          Length = 1622

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +2

Query: 44  EDCISLRQEEEGCRATCRREGTGSRPRCRRPGQEGG 151
           E C+ LRQ E    ATC   GT  R + R   ++GG
Sbjct: 91  ESCVGLRQREYEVSATCMASGTRDRSKPRDLLEDGG 126


>UniRef50_UPI0000EB1B91 Cluster: junctional sarcoplasmic reticulum
           protein 1; n=2; Canis lupus familiaris|Rep: junctional
           sarcoplasmic reticulum protein 1 - Canis familiaris
          Length = 256

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -3

Query: 138 PGLLQRGRLPVPSRRQVALHPSSSCRREMQSS 43
           PG+  RG  P P R  + L P S  RR+ Q+S
Sbjct: 61  PGVWPRGGFPTPPREGLGLSPRSPARRKAQAS 92


>UniRef50_Q19Q26 Cluster: CG1648-like; n=1; Belgica antarctica|Rep:
           CG1648-like - Belgica antarctica
          Length = 231

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +3

Query: 3   MFSGIAGAFRSIGEKTASLFDRXXXXXXXXXXXXXXXXXHVVEDQVKKAGELI 161
           MFSG   + +S G++   LF++                  + EDQ+KK  + I
Sbjct: 1   MFSGFTASLKSFGDRATGLFEKKKKSATDLATEKAENAKKMAEDQIKKTSDAI 53


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,016,455
Number of Sequences: 1657284
Number of extensions: 6107318
Number of successful extensions: 15216
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15191
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)