BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309H10f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060755-1|AAL28303.1| 230|Drosophila melanogaster GH20817p pro... 33 0.18
AE013599-923|AAF58898.1| 230|Drosophila melanogaster CG1648-PA,... 33 0.18
BT022280-1|AAY54696.1| 361|Drosophila melanogaster IP11380p pro... 31 0.72
AE014298-2361|AAF48587.2| 355|Drosophila melanogaster CG9915-PA... 31 0.72
AY118441-1|AAM48470.1| 961|Drosophila melanogaster SD06668p pro... 29 3.8
AE014297-3590|AAF56321.3| 961|Drosophila melanogaster CG6695-PA... 29 3.8
>AY060755-1|AAL28303.1| 230|Drosophila melanogaster GH20817p
protein.
Length = 230
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 3 MFSGIAGAFRSIGEKTASLFDRXXXXXXXXXXXXXXXXXHVVEDQVKKAGELI 161
MFS I+ + ++ G+KTA+LF + + E+Q KK G+ +
Sbjct: 1 MFSSISASLKNFGDKTANLFSKKKDEAEKLANEKAAEAQKLAEEQAKKVGQSV 53
>AE013599-923|AAF58898.1| 230|Drosophila melanogaster CG1648-PA,
isoform A protein.
Length = 230
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 3 MFSGIAGAFRSIGEKTASLFDRXXXXXXXXXXXXXXXXXHVVEDQVKKAGELI 161
MFS I+ + ++ G+KTA+LF + + E+Q KK G+ +
Sbjct: 1 MFSSISASLKNFGDKTANLFSKKKDEAEKLANEKAAEAQKLAEEQAKKVGQSV 53
>BT022280-1|AAY54696.1| 361|Drosophila melanogaster IP11380p
protein.
Length = 361
Score = 31.5 bits (68), Expect = 0.72
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 147 PS*PGLLQRGRLPVPSRRQVALHPSSSCRREMQSSRR 37
P PG + R R+P+PS + + P S+ E+ +S +
Sbjct: 288 PGDPGWVARARVPMPSNKDYVIRPKSTVEGEVSASTK 324
>AE014298-2361|AAF48587.2| 355|Drosophila melanogaster CG9915-PA
protein.
Length = 355
Score = 31.5 bits (68), Expect = 0.72
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 147 PS*PGLLQRGRLPVPSRRQVALHPSSSCRREMQSSRR 37
P PG + R R+P+PS + + P S+ E+ +S +
Sbjct: 282 PGDPGWVARARVPMPSNKDYVIRPKSTVEGEVSASTK 318
>AY118441-1|AAM48470.1| 961|Drosophila melanogaster SD06668p
protein.
Length = 961
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +1
Query: 10 AESQAHFVASARRLHLSSTGRRRMQSNLPPRRHRKPPTL*KTRSRRRASLLVEPR 174
++S A VAS +L SST R R +S R R PP +T+ RR+S E R
Sbjct: 793 SDSDAESVASESQLAKSSTRRSRSRSE---SRRRSPPP--ETQHSRRSSSRTERR 842
>AE014297-3590|AAF56321.3| 961|Drosophila melanogaster CG6695-PA,
isoform A protein.
Length = 961
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +1
Query: 10 AESQAHFVASARRLHLSSTGRRRMQSNLPPRRHRKPPTL*KTRSRRRASLLVEPR 174
++S A VAS +L SST R R +S R R PP +T+ RR+S E R
Sbjct: 793 SDSDAESVASESQLAKSSTRRSRSRSE---SRRRSPPP--ETQHSRRSSSRTERR 842
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,815,308
Number of Sequences: 53049
Number of extensions: 295841
Number of successful extensions: 748
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -