Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309H06f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4CZY8 Cluster: Putative uncharacterized protein; n=1; ...    34   2.3  
UniRef50_Q22KK6 Cluster: DHHC zinc finger domain containing prot...    33   4.0  

>UniRef50_Q4CZY8 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 667

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = -3

Query: 201 NIQYWPFTTVFFSILNIK*VSTKNYYNKKINDHWFFTELSLAS 73
           N  +WPFTT++ +   I  V T++Y++   N+    TEL +AS
Sbjct: 577 NHTHWPFTTIWNATRTIIDVDTRSYHHSAANNSASRTELLMAS 619


>UniRef50_Q22KK6 Cluster: DHHC zinc finger domain containing protein;
            n=2; Eukaryota|Rep: DHHC zinc finger domain containing
            protein - Tetrahymena thermophila SB210
          Length = 1751

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
 Frame = -2

Query: 304  FISPYFAESNIDKIIY*NMERNLQHCLEAIKCVTQY--------TILAFYNSLFFYF 158
            + +PYF E    K  Y N     +HCL   +C++ Y          +A  N LFF+F
Sbjct: 1630 YTAPYFFEKRYCKYCYINQPTRSKHCLICNRCISTYDHHCPWIGVCIAQRNHLFFFF 1686


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,043,122
Number of Sequences: 1657284
Number of extensions: 6645791
Number of successful extensions: 12303
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12300
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)