Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309H05f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 93 3e-19
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 93 3e-19
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 93 3e-19
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 93 3e-19
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 93 3e-19
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 91 8e-19
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 90 2e-18
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 89 3e-18
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 89 3e-18
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 89 3e-18
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 86 3e-17
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 86 3e-17
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 80 2e-15
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 79 3e-15
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 79 4e-15
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 79 5e-15
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 79 5e-15
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 79 5e-15
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 79 5e-15
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 78 6e-15
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 76 3e-14
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 75 6e-14
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 69 5e-12
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 66 4e-11
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 60 1e-09
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 48 8e-06
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 92.7 bits (220), Expect = 3e-19
Identities = 50/143 (34%), Positives = 83/143 (58%), Gaps = 1/143 (0%)
Frame = +2
Query: 77 ISVKVLKSVIDIIAPHLASIFNDCIRCGVFPDLMKHSKVIPLFKSG-STDDPSNYRPISV 253
I+ +++K++ +L I+N +R G +PD KH++V + K G S +DP +YRPIS+
Sbjct: 388 ITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 447
Query: 254 LPTLSKIFEKIILTQLLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDC 433
L LSK+FE+++L +L + QFGF + T A + + I +++E C
Sbjct: 448 LSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYC 507
Query: 434 LGIFCDLSKAFDCVEHKTLVRKL 502
+F D+S+AFD V H+ L+ KL
Sbjct: 508 SAVFLDISEAFDRVWHEGLLLKL 530
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 92.7 bits (220), Expect = 3e-19
Identities = 50/143 (34%), Positives = 83/143 (58%), Gaps = 1/143 (0%)
Frame = +2
Query: 77 ISVKVLKSVIDIIAPHLASIFNDCIRCGVFPDLMKHSKVIPLFKSG-STDDPSNYRPISV 253
I+ +++K++ +L I+N +R G +PD KH++V + K G S +DP +YRPIS+
Sbjct: 504 ITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 563
Query: 254 LPTLSKIFEKIILTQLLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDC 433
L LSK+FE+++L +L + QFGF + T A + + I +++E C
Sbjct: 564 LSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYC 623
Query: 434 LGIFCDLSKAFDCVEHKTLVRKL 502
+F D+S+AFD V H+ L+ KL
Sbjct: 624 SAVFLDISEAFDRVWHEGLLLKL 646
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 92.7 bits (220), Expect = 3e-19
Identities = 50/143 (34%), Positives = 83/143 (58%), Gaps = 1/143 (0%)
Frame = +2
Query: 77 ISVKVLKSVIDIIAPHLASIFNDCIRCGVFPDLMKHSKVIPLFKSG-STDDPSNYRPISV 253
I+ +++K++ +L I+N +R G +PD KH++V + K G S +DP +YRPIS+
Sbjct: 504 ITNQLIKALPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 563
Query: 254 LPTLSKIFEKIILTQLLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDC 433
L LSK+FE+++L +L + QFGF + T A + + I +++E C
Sbjct: 564 LSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYC 623
Query: 434 LGIFCDLSKAFDCVEHKTLVRKL 502
+F D+S+AFD V H+ L+ KL
Sbjct: 624 SAVFLDISEAFDRVWHEGLLLKL 646
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 92.7 bits (220), Expect = 3e-19
Identities = 50/143 (34%), Positives = 83/143 (58%), Gaps = 1/143 (0%)
Frame = +2
Query: 77 ISVKVLKSVIDIIAPHLASIFNDCIRCGVFPDLMKHSKVIPLFKSG-STDDPSNYRPISV 253
I+ +++K++ +L I+N +R G +PD KH++V + K G S +DP +YRPIS+
Sbjct: 466 ITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 525
Query: 254 LPTLSKIFEKIILTQLLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDC 433
L LSK+FE+++L +L + QFGF + T A + + I +++E C
Sbjct: 526 LSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYC 585
Query: 434 LGIFCDLSKAFDCVEHKTLVRKL 502
+F D+S+AFD V H+ L+ KL
Sbjct: 586 SAVFLDISEAFDRVWHEGLLLKL 608
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 92.7 bits (220), Expect = 3e-19
Identities = 50/143 (34%), Positives = 83/143 (58%), Gaps = 1/143 (0%)
Frame = +2
Query: 77 ISVKVLKSVIDIIAPHLASIFNDCIRCGVFPDLMKHSKVIPLFKSG-STDDPSNYRPISV 253
I+ +++K++ +L I+N +R G +PD KH++V + K G S +DP +YRPIS+
Sbjct: 504 ITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 563
Query: 254 LPTLSKIFEKIILTQLLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDC 433
L LSK+FE+++L +L + QFGF + T A + + I +++E C
Sbjct: 564 LSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYC 623
Query: 434 LGIFCDLSKAFDCVEHKTLVRKL 502
+F D+S+AFD V H+ L+ KL
Sbjct: 624 SAVFLDISEAFDRVWHEGLLLKL 646
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 91.1 bits (216), Expect = 8e-19
Identities = 44/128 (34%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
Frame = +2
Query: 122 HLASIFNDCIRCGVFPDLMKHSKVIPLFKSGSTDD-PSNYRPISVLPTLSKIFEKIILTQ 298
+LA I+N +R FP K + ++ + K G ++ P +YRPIS+L +LSK++E++I +
Sbjct: 475 YLALIYNAILRVQFFPKQWKMAAILMIHKPGKPEESPESYRPISLLSSLSKLWERLIANR 534
Query: 299 LLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDCLGIFCDLSKAFDCVE 478
L + +L + QFGF +G ST + L K+I +++++ C +F D+ +AFD V
Sbjct: 535 LNDIMTERRILPDHQFGFRQGHSTVEQVHRLTKHILQAFDDKEYCNAVFIDMQQAFDRVW 594
Query: 479 HKTLVRKL 502
H L+ K+
Sbjct: 595 HDGLISKV 602
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 89.8 bits (213), Expect = 2e-18
Identities = 48/143 (33%), Positives = 84/143 (58%), Gaps = 1/143 (0%)
Frame = +2
Query: 77 ISVKVLKSVIDIIAPHLASIFNDCIRCGVFPDLMKHSKVIPLFKSG-STDDPSNYRPISV 253
I+ +++K++ +L I+N +R G +P+ KH++V + K G S+++P +YRPIS+
Sbjct: 516 ITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSSNEPKSYRPISL 575
Query: 254 LPTLSKIFEKIILTQLLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDC 433
L LSK+FE+++L +L + QFGF + T A + + I +++E C
Sbjct: 576 LSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYC 635
Query: 434 LGIFCDLSKAFDCVEHKTLVRKL 502
+F D+S+AFD V H+ L+ KL
Sbjct: 636 SAVFLDISEAFDRVWHEGLLLKL 658
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 89.0 bits (211), Expect = 3e-18
Identities = 48/143 (33%), Positives = 84/143 (58%), Gaps = 1/143 (0%)
Frame = +2
Query: 77 ISVKVLKSVIDIIAPHLASIFNDCIRCGVFPDLMKHSKVIPLFKSG-STDDPSNYRPISV 253
I+ +++K++ +L I+N +R G +P+ KH++V + K G S ++P +YRPIS+
Sbjct: 504 ITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSANEPRSYRPISL 563
Query: 254 LPTLSKIFEKIILTQLLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDC 433
L LSKIFE+++L +L + + QFGF + + A + + I +++E C
Sbjct: 564 LSGLSKIFERLLLKRLFKVDLFKKAIPLHQFGFRKEHGSEQQIARVTQFILEAFERKEYC 623
Query: 434 LGIFCDLSKAFDCVEHKTLVRKL 502
+F D+S+AFD V H+ L+ KL
Sbjct: 624 SAVFLDISEAFDRVWHEGLLLKL 646
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 89.0 bits (211), Expect = 3e-18
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 2/149 (1%)
Frame = +2
Query: 74 GISVKVLKSVIDIIAPHLASIFNDCIRCGVFPDLMKHSKVIPLFKSGST-DDPSNYRPIS 250
GI LK++ H+ +I N C++ G FP K +K++P+ K G D+P +YRPIS
Sbjct: 483 GIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPESYRPIS 542
Query: 251 VLPTLSKIFEKIILTQLLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHD 430
+L LSKI EK+I +L++ + +N L Q+GF G +T ++N K +S
Sbjct: 543 LLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTI-LPTLKLRNYIKESIQSKQ 601
Query: 431 CLG-IFCDLSKAFDCVEHKTLVRKLHHYG 514
+G + D+ AFD V H L+ KL G
Sbjct: 602 SVGLVTLDIEAAFDTVWHDGLLHKLKMIG 630
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 89.0 bits (211), Expect = 3e-18
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 2/149 (1%)
Frame = +2
Query: 74 GISVKVLKSVIDIIAPHLASIFNDCIRCGVFPDLMKHSKVIPLFKSGST-DDPSNYRPIS 250
GI LK++ H+ +I N C++ G FP K +K++P+ K G D+P +YRPIS
Sbjct: 431 GIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPESYRPIS 490
Query: 251 VLPTLSKIFEKIILTQLLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHD 430
+L LSKI EK+I +L++ + +N L Q+GF G +T ++N K +S
Sbjct: 491 LLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTI-LPTLKLRNYIKESIQSKQ 549
Query: 431 CLG-IFCDLSKAFDCVEHKTLVRKLHHYG 514
+G + D+ AFD V H L+ KL G
Sbjct: 550 SVGLVTLDIEAAFDTVWHDGLLHKLKMIG 578
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 85.8 bits (203), Expect = 3e-17
Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Frame = +2
Query: 122 HLASIFNDCIRCGVFPDLMKHSKVIPLFKSGSTD-DPSNYRPISVLPTLSKIFEKIILTQ 298
H+ +FN + G FP K S ++ + K G PS+YRPIS+L LSK+FEK++L +
Sbjct: 470 HICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLR 529
Query: 299 LLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDCLGIFCDLSKAFDCV 475
+ H NN L QFGF T + + I ++E C IF D+++AFD V
Sbjct: 530 ISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRV 588
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 85.8 bits (203), Expect = 3e-17
Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Frame = +2
Query: 122 HLASIFNDCIRCGVFPDLMKHSKVIPLFKSGSTD-DPSNYRPISVLPTLSKIFEKIILTQ 298
H+ +FN + G FP K S ++ + K G PS+YRPIS+L LSK+FEK++L +
Sbjct: 470 HICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLR 529
Query: 299 LLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDCLGIFCDLSKAFDCV 475
+ H NN L QFGF T + + I ++E C IF D+++AFD V
Sbjct: 530 ISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRV 588
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 79.8 bits (188), Expect = 2e-15
Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
Frame = +2
Query: 53 KNTADLWGISVKVLKSVIDIIAPHLASIFNDCIRCGVFPDLMKHSKVIPLFKSGSTD--D 226
+ + L GI+ + K+V I HLAS+F+ CIR G FP K +V+ L K D +
Sbjct: 449 RRSPGLDGINGTICKAVWRAIPEHLASLFSRCIRLGYFPAEWKCPRVVSLLKGPDKDKCE 508
Query: 227 PSNYRPISVLPTLSKIFEKIILTQLLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIF 406
PS+YR I +LP K+ E I++ ++ E QFGF +GR DA ++ ++
Sbjct: 509 PSSYRGICLLPVFGKVLEAIMVNRVREVLPEG---CRWQFGFRQGRCVEDAWRHVKSSVG 565
Query: 407 KSWEESHDCLGIFCDLSKAFDCVEHKTLVRKLHHYG 514
S + LG F D AFD VE + +L G
Sbjct: 566 AS--AAQYVLGTFVDFKGAFDNVEWSAALSRLADLG 599
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 79.4 bits (187), Expect = 3e-15
Identities = 39/128 (30%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Frame = +2
Query: 122 HLASIFNDCIRCGVFPDLMKHSKVIPLFKSGSTD-DPSNYRPISVLPTLSKIFEKIILTQ 298
++ +FN +R FP K + + K G + +P++YRPIS+LP++SK+FE++I +
Sbjct: 474 YITLVFNAIVRLQYFPYQWKLGIISMIHKPGKPEREPASYRPISLLPSISKVFERLIAVR 533
Query: 299 LLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDCLGIFCDLSKAFDCVE 478
++ + + QFGF G T + +V+ I +++ C +F D+ +AFD V
Sbjct: 534 IVSIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQILTAYDSKEYCNSLFLDIREAFDRVW 593
Query: 479 HKTLVRKL 502
H L K+
Sbjct: 594 HIGLQLKI 601
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 79.0 bits (186), Expect = 4e-15
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Frame = +2
Query: 86 KVLKSVIDIIAPHLASIFNDCIRCGVFPDLMKHSKVIPLFKSGSTD-DPSNYRPISVLPT 262
+ ++ + D L IFN + G FP K + +I + K+G T D +YRPIS+LP+
Sbjct: 266 RTIRLLPDQALQFLVLIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPISLLPS 325
Query: 263 LSKIFEKIILTQLLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDCLGI 442
L KI E++IL +LL + + QFGF T + +V ++ E +G
Sbjct: 326 LGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGA 385
Query: 443 FCDLSKAFDCVEHKTLVRK 499
F D+ +AFD V H L+ K
Sbjct: 386 FLDIQQAFDRVWHPGLLYK 404
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 78.6 bits (185), Expect = 5e-15
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Frame = +2
Query: 86 KVLKSVIDIIAPHLASIFNDCIRCGVFPDLMKHSKVIPLFKSGSTD-DPSNYRPISVLPT 262
+ ++ + D LA IFN + G FP K + +I + K+G T D +YRP S+LP+
Sbjct: 464 RTIRLLPDQALQFLALIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPTSLLPS 523
Query: 263 LSKIFEKIILTQLLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDCLGI 442
L KI E++IL +LL + + QFGF T + +V ++ E +G
Sbjct: 524 LGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGA 583
Query: 443 FCDLSKAFDCVEHKTLVRK 499
F D+ +AFD V H L+ K
Sbjct: 584 FLDIQQAFDRVWHPGLLYK 602
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 78.6 bits (185), Expect = 5e-15
Identities = 44/128 (34%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
Frame = +2
Query: 122 HLASIFNDCIRCGVFPDLMKHSKVIPLFKSGSTDDPSN-YRPISVLPTLSKIFEKIILTQ 298
+L I+N+ +R G FP+ KH+ + + K G + N YRPIS+L LSK+ E+I+L +
Sbjct: 75 YLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKR 134
Query: 299 LLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDCLGIFCDLSKAFDCVE 478
L + + + + QFGF + A + + I K+++E C F D+++AFD V
Sbjct: 135 LYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVW 194
Query: 479 HKTLVRKL 502
H L+ KL
Sbjct: 195 HDGLLYKL 202
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 78.6 bits (185), Expect = 5e-15
Identities = 44/128 (34%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
Frame = +2
Query: 122 HLASIFNDCIRCGVFPDLMKHSKVIPLFKSGSTDDPSN-YRPISVLPTLSKIFEKIILTQ 298
+L I+N+ +R G FP+ KH+ + + K G + N YRPIS+L LSK+ E+I+L +
Sbjct: 522 YLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKR 581
Query: 299 LLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDCLGIFCDLSKAFDCVE 478
L + + + + QFGF + A + + I K+++E C F D+++AFD V
Sbjct: 582 LYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVW 641
Query: 479 HKTLVRKL 502
H L+ KL
Sbjct: 642 HDGLLYKL 649
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 78.6 bits (185), Expect = 5e-15
Identities = 44/128 (34%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
Frame = +2
Query: 122 HLASIFNDCIRCGVFPDLMKHSKVIPLFKSGSTDDPSN-YRPISVLPTLSKIFEKIILTQ 298
+L I+N+ +R G FP+ KH+ + + K G + N YRPIS+L LSK+ E+I+L +
Sbjct: 522 YLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKR 581
Query: 299 LLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDCLGIFCDLSKAFDCVE 478
L + + + + QFGF + A + + I K+++E C F D+++AFD V
Sbjct: 582 LYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVW 641
Query: 479 HKTLVRKL 502
H L+ KL
Sbjct: 642 HDGLLYKL 649
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 78.2 bits (184), Expect = 6e-15
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Frame = +2
Query: 122 HLASIFNDCIRCGVFPDLMKHSKVIPLFKSGSTDD-PSNYRPISVLPTLSKIFEKIILTQ 298
++ +FN + G FP K K+I + K G S+YRPIS+L +SK+FEK +L +
Sbjct: 472 YITKLFNAITKLGYFPQRWKMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEKCLLIR 531
Query: 299 LLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDCLGIFCDLSKAFDCV 475
L +H +N++ QFGF T + + I ++E C +F D+S+AFD V
Sbjct: 532 LNQHQTYHNIIPAHQFGFRESHGTIEQVNRITTEIRTAFEYREYCTAVFLDVSQAFDKV 590
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 75.8 bits (178), Expect = 3e-14
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
Frame = +2
Query: 122 HLASIFNDCIRCGVFPDLMKHSKVIPLFKSGSTDDPSN-YRPISVLPTLSKIFEKIILTQ 298
+L I+N+ +R G FP+ KH+ + + K G + N YRPIS+L LSK+ E+I+ +
Sbjct: 522 YLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILPKR 581
Query: 299 LLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDCLGIFCDLSKAFDCVE 478
L + + + + QFGF + A + + I K+++E C F D+++AFD V
Sbjct: 582 LYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVW 641
Query: 479 HKTLVRKL 502
H L+ KL
Sbjct: 642 HDGLLYKL 649
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 74.9 bits (176), Expect = 6e-14
Identities = 48/146 (32%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Frame = +2
Query: 77 ISVKVLKSVIDIIAPHLASIFNDCIRCGVFPDLMKHSKVIPLFKSGSTDDP-SNYRPISV 253
IS +++K+ + +FN+ + P K S +IP+ K + S+YRPIS+
Sbjct: 455 ISYQMIKNSSHTTKNRITKLFNEIFNSHI-PQAYKTSLIIPILKPNTDKTKTSSYRPISL 513
Query: 254 LPTLSKIFEKIILTQLLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDC 433
++KI +KII +L NNL+++KQFGF +G+ST+D Y+ I KS + H
Sbjct: 514 NCCIAKILDKIIAKRLWWLVTYNNLINDKQFGFKKGKSTSDCLLYVDYLITKS--KMHTS 571
Query: 434 LGIFCDLSKAFDCVEHKTLVRKLHHY 511
L + D S+AFD V +++++L +
Sbjct: 572 L-VTLDFSRAFDRVGVHSIIQQLQEW 596
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 68.5 bits (160), Expect = 5e-12
Identities = 37/114 (32%), Positives = 58/114 (50%)
Frame = +2
Query: 134 IFNDCIRCGVFPDLMKHSKVIPLFKSGSTDDPSNYRPISVLPTLSKIFEKIILTQLLEHF 313
+FN + G FP K S +I + K +YRPIS+L LSK+FEK +L ++ H
Sbjct: 16 LFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQPSYRPISLLTCLSKLFEKGLLLRISPHL 75
Query: 314 NSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDCLGIFCDLSKAFDCV 475
++N L + QF F + + I ++E C +F D+++AFD V
Sbjct: 76 KTHNTLPSYQFDFPAKHGAIEQVNRITTEIRTAFEHREYCTALFLDVAQAFDRV 129
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 65.7 bits (153), Expect = 4e-11
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Frame = +2
Query: 77 ISVKVLKSVIDIIAPHLASIFNDCIRCGVFPDLMKHSKVIPLFKSGST-DDPSNYRPISV 253
+S +LK++ + L IFN + G +P + + +IP+ K D ++YRPIS+
Sbjct: 459 VSYPMLKNLSPHLKTKLLDIFNQILTTGKYPHTWRSAIIIPISKPNKPPSDINSYRPISL 518
Query: 254 LPTLSKIFEKIILTQLLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDC 433
L L K EKII +L +NL+ + Q F ST DA + + +
Sbjct: 519 LSCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSNHSTMDALLRIQHFASNALSTKNHV 578
Query: 434 LGIFCDLSKAFDCVEHKTLVRKLHHYGI 517
+ D +AFD V ++ +L +GI
Sbjct: 579 SILATDFERAFDRVGIHAVLCRLERWGI 606
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Frame = +2
Query: 74 GISVKVLKSVIDIIAPHLASIFNDCIRCGVFPDLMKHSKVIPLFKS-GSTDDPSNYRPIS 250
GI ++K+ F C+ GVFP K K++ L K G + P +YRP+
Sbjct: 424 GIPGVIVKAAATARPEVFRDTFQQCLLDGVFPKRWKKMKLVLLLKGKGPANVPRSYRPLC 483
Query: 251 VLPTLSKIFEKIILTQLLEHFNSNNLLHNKQFGFTRGRSTTDA 379
+L + K+FE+I+ ++ S L +Q+GF +G+ST DA
Sbjct: 484 LLDIVGKLFERILYARIELITESPTGLQGQQYGFRKGKSTLDA 526
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 48.0 bits (109), Expect = 8e-06
Identities = 36/140 (25%), Positives = 63/140 (45%)
Frame = +2
Query: 95 KSVIDIIAPHLASIFNDCIRCGVFPDLMKHSKVIPLFKSGSTDDPSNYRPISVLPTLSKI 274
KS ++ + + I N + CG P ++ ++ + + K+ + P ++RPISV L +
Sbjct: 368 KSAREVPSGIMLRIMNLILWCGNLPHSIRLARTVFIPKTVTAKRPQDFRPISVPSVLVRQ 427
Query: 275 FEKIILTQLLEHFNSNNLLHNKQFGFTRGRSTTDAGAYLVKNIFKSWEESHDCLGIFCDL 454
I+ T+L NS+ +Q GF D + + S + C D+
Sbjct: 428 LNAILATRL----NSSINWDPRQRGFLPTDGCADNATIVDLVLRHSHKHFRSCYIANLDV 483
Query: 455 SKAFDCVEHKTLVRKLHHYG 514
SKAFD + H ++ L YG
Sbjct: 484 SKAFDSLSHASIYDTLRAYG 503
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,294,532
Number of Sequences: 53049
Number of extensions: 389245
Number of successful extensions: 992
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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