Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309H04f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   0.71 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   0.71 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   8.7  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 203 VCKGVTLRDDTWGNFKLTNNALVLVMG 283
           VC  + L  + W  F + NN L +V+G
Sbjct: 169 VCFMMLLMLEIWRRFTILNNYLTIVLG 195


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 203 VCKGVTLRDDTWGNFKLTNNALVLVMG 283
           VC  + L  + W  F + NN L +V+G
Sbjct: 165 VCFMMLLMLEIWRRFTILNNYLTIVLG 191


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 122 PPHLGTFPCPILPSLKR 72
           PPHL + P  + P  K+
Sbjct: 240 PPHLSSHPAIVTPGPKQ 256


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 122 PPHLGTFPCPILPSLKR 72
           PPHL + P  + P  K+
Sbjct: 132 PPHLSSHPAIVTPGPKQ 148


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 369 WICQRVSSTWVTL 407
           W+   +S TW+TL
Sbjct: 467 WLLWLLSQTWITL 479


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 369 WICQRVSSTWVTL 407
           W+   +S TW+TL
Sbjct: 467 WLLWLLSQTWITL 479


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 369 WICQRVSSTWVTL 407
           W+   +S TW+TL
Sbjct: 467 WLLWLLSQTWITL 479


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 369 WICQRVSSTWVTL 407
           W+   +S TW+TL
Sbjct: 467 WLLWLLSQTWITL 479


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 403 HLLHECYSAVS 435
           HLL +CY AVS
Sbjct: 45  HLLIQCYIAVS 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,731
Number of Sequences: 336
Number of extensions: 2862
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)