Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309H04f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical p... 108 3e-24
Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical pr... 108 3e-24
U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine tr... 108 3e-24
AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical ... 40 0.001
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 39 0.002
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 39 0.002
Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr... 39 0.002
AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical ... 39 0.002
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 39 0.002
Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical p... 38 0.004
U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 38 0.006
U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 37 0.008
AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 37 0.008
AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical ... 36 0.013
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 35 0.041
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 35 0.041
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 35 0.041
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 35 0.041
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 35 0.041
Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical pr... 33 0.094
AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical ... 33 0.12
AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical ... 33 0.12
U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 32 0.22
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 32 0.22
Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr... 30 0.87
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr... 30 0.87
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr... 30 0.87
U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylat... 29 2.0
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 28 3.5
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 28 3.5
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 28 3.5
AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical ... 28 4.7
Z81526-3|CAB04261.2| 301|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81077-7|CAB03070.2| 116|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 27 8.1
AL023835-12|CAA19484.1| 412|Caenorhabditis elegans Hypothetical... 27 8.1
>Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 108 bits (259), Expect = 3e-24
Identities = 63/126 (50%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Frame = +2
Query: 80 VKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDDTWGNFKLTN 259
V VKW KE Y VEV+T P++FKAQ+FALT V PERQKVV G TL DD W +
Sbjct: 4 VNVKWQKEKYV-VEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDDDWEGITIKE 62
Query: 260 NALVLVMGSKEEDVPAAP-VEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 436
N +++MGS E +P P V + + +AE +A+ P GL NLGNTCY N+ VQ L
Sbjct: 63 NMTIMMMGSVGE-IPKPPTVLEKKQANRDKQAEEISAL-YPCGLANLGNTCYFNSCVQML 120
Query: 437 KTVPEL 454
K V EL
Sbjct: 121 KEVNEL 126
>Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 108 bits (259), Expect = 3e-24
Identities = 63/126 (50%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Frame = +2
Query: 80 VKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDDTWGNFKLTN 259
V VKW KE Y VEV+T P++FKAQ+FALT V PERQKVV G TL DD W +
Sbjct: 4 VNVKWQKEKYV-VEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDDDWEGITIKE 62
Query: 260 NALVLVMGSKEEDVPAAP-VEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 436
N +++MGS E +P P V + + +AE +A+ P GL NLGNTCY N+ VQ L
Sbjct: 63 NMTIMMMGSVGE-IPKPPTVLEKKQANRDKQAEEISAL-YPCGLANLGNTCYFNSCVQML 120
Query: 437 KTVPEL 454
K V EL
Sbjct: 121 KEVNEL 126
>U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine
transglycosylase protein.
Length = 489
Score = 108 bits (259), Expect = 3e-24
Identities = 63/126 (50%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Frame = +2
Query: 80 VKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDDTWGNFKLTN 259
V VKW KE Y VEV+T P++FKAQ+FALT V PERQKVV G TL DD W +
Sbjct: 4 VNVKWQKEKYV-VEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDDDWEGITIKE 62
Query: 260 NALVLVMGSKEEDVPAAP-VEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCL 436
N +++MGS E +P P V + + +AE +A+ P GL NLGNTCY N+ VQ L
Sbjct: 63 NMTIMMMGSVGE-IPKPPTVLEKKQANRDKQAEEISAL-YPCGLANLGNTCYFNSCVQML 120
Query: 437 KTVPEL 454
K V EL
Sbjct: 121 KEVNEL 126
>AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 699
Score = 39.5 bits (88), Expect = 0.001
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +2
Query: 377 PEGLINLGNTCYMNATVQCLKTVPELRNALLN 472
P G+ N+GNTC+MNA +Q L ++ E R +++
Sbjct: 377 PRGMRNVGNTCFMNAVLQALASISEFREYIMS 408
>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 39.1 bits (87), Expect = 0.002
Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 3/124 (2%)
Frame = +2
Query: 122 VNTDDEPVLF-KAQIFALTGVQP--ERQKVVCKGVTLRDDTWGNFKLTNNALVLVMGSKE 292
VNTD++ V F KA A Q K RD+ + +L ++ ++
Sbjct: 29 VNTDEDQVTFSKAMEVAKLDCQKCLLHDMHSSKSSNCRDNPFCIHRLGLEKFEKLITQEQ 88
Query: 293 EDVPAAPVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLN 472
E A +Q R D+N D P GLIN GN CY+N+ +Q VPE R + +
Sbjct: 89 ETKEEAKKDQKR--RDLN--------DQPAGLINGGNFCYVNSFLQVWFNVPEFRQLIYD 138
Query: 473 YDKS 484
+ S
Sbjct: 139 FRPS 142
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 39.1 bits (87), Expect = 0.002
Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 3/124 (2%)
Frame = +2
Query: 122 VNTDDEPVLF-KAQIFALTGVQP--ERQKVVCKGVTLRDDTWGNFKLTNNALVLVMGSKE 292
VNTD++ V F KA A Q K RD+ + +L ++ ++
Sbjct: 29 VNTDEDQVTFSKAMEVAKLDCQKCLLHDMHSSKSSNCRDNPFCIHRLGLEKFEKLITQEQ 88
Query: 293 EDVPAAPVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLN 472
E A +Q R D+N D P GLIN GN CY+N+ +Q VPE R + +
Sbjct: 89 ETKEEAKKDQKR--RDLN--------DQPAGLINGGNFCYVNSFLQVWFNVPEFRQLIYD 138
Query: 473 YDKS 484
+ S
Sbjct: 139 FRPS 142
>Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical
protein T05H10.1 protein.
Length = 1326
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 383 GLINLGNTCYMNATVQCLKTVPELRNALLNYD 478
GL+N TCY+N+ VQ L PE RNA+ +++
Sbjct: 89 GLVNQAMTCYLNSLVQSLYMTPEFRNAMYDWE 120
>AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical
protein Y59A8B.2 protein.
Length = 357
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 383 GLINLGNTCYMNATVQCLKTVPEL 454
GL N+GNTC+M+AT+QCL P L
Sbjct: 25 GLFNMGNTCFMSATLQCLFQTPGL 48
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2
Query: 383 GLINLGNTCYMNATVQCLKTVPELRNALL 469
GL NLGNTC+M + QCL +P LR L
Sbjct: 276 GLSNLGNTCFMASAFQCLSNMPPLREYFL 304
>Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical
protein R10E11.3a protein.
Length = 426
Score = 37.9 bits (84), Expect = 0.004
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 383 GLINLGNTCYMNATVQCLKTVPELRNALLNYDKS 484
GL+N GNTCY N+ +Q L R +LNY ++
Sbjct: 28 GLVNFGNTCYCNSVIQALFFCRPFREKVLNYKQT 61
>U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect
protein 3, isoformb protein.
Length = 1178
Score = 37.5 bits (83), Expect = 0.006
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 344 NEAELATAMDMPE--GLINLGNTCYMNATVQCLKTVPELRNALLNYD 478
+ A+L+ + P GL+N GN CY NA +QCL V L L+ D
Sbjct: 556 SNAQLSDSSGRPGAVGLVNYGNFCYRNAGIQCLARVSPLTQYFLDED 602
>U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect
protein 3, isoforma protein.
Length = 1175
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +2
Query: 383 GLINLGNTCYMNATVQCLKTVPELRNALLNYD 478
GL+N GN CY NA +QCL V L L+ D
Sbjct: 568 GLVNYGNFCYRNAGIQCLARVSPLTQYFLDED 599
>AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin
c-terminal hydrolase protein.
Length = 1175
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +2
Query: 383 GLINLGNTCYMNATVQCLKTVPELRNALLNYD 478
GL+N GN CY NA +QCL V L L+ D
Sbjct: 568 GLVNYGNFCYRNAGIQCLARVSPLTQYFLDED 599
>AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical
protein Y67D2.2 protein.
Length = 474
Score = 36.3 bits (80), Expect = 0.013
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 329 FVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCLKTVP 448
F+ N E +++ +P GL N GNTCYMNA +Q L + P
Sbjct: 29 FLTSRNGEEASSSRLVP-GLANQGNTCYMNALLQGLASCP 67
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 34.7 bits (76), Expect = 0.041
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 383 GLINLGNTCYMNATVQCLKTVPELRN---ALLNYDKSSTGGDTAGEL 514
G+ N G TCYMNA +Q L VP L AL N D GD L
Sbjct: 1768 GMKNDGGTCYMNAMIQQLVHVPGLSRELIALQNIDPQLRWGDNTAAL 1814
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 34.7 bits (76), Expect = 0.041
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 383 GLINLGNTCYMNATVQCLKTVPELRN---ALLNYDKSSTGGDTAGEL 514
G+ N G TCYMNA +Q L VP L AL N D GD L
Sbjct: 1765 GMKNDGGTCYMNAMIQQLVHVPGLSRELIALQNIDPQLRWGDNTAAL 1811
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 34.7 bits (76), Expect = 0.041
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2
Query: 383 GLINLGNTCYMNATVQCLKTVPELRNALL 469
GL N+GNTC+MNA +Q L ELR L
Sbjct: 424 GLRNIGNTCFMNAVLQMLVNNIELREYFL 452
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 34.7 bits (76), Expect = 0.041
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 383 GLINLGNTCYMNATVQCLKTVPELRN---ALLNYDKSSTGGDTAGEL 514
G+ N G TCYMNA +Q L VP L AL N D GD L
Sbjct: 1768 GMKNDGGTCYMNAMIQQLVHVPGLSRELIALQNIDPQLRWGDNTAAL 1814
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 34.7 bits (76), Expect = 0.041
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 383 GLINLGNTCYMNATVQCLKTVPELRN---ALLNYDKSSTGGDTAGEL 514
G+ N G TCYMNA +Q L VP L AL N D GD L
Sbjct: 1765 GMKNDGGTCYMNAMIQQLVHVPGLSRELIALQNIDPQLRWGDNTAAL 1811
>Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical
protein K02C4.3 protein.
Length = 1307
Score = 33.5 bits (73), Expect = 0.094
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 383 GLINLGNTCYMNATVQCLKTVPELRNAL 466
GL N GNTC++N Q L ++P+ R+ L
Sbjct: 200 GLYNSGNTCWLNCLSQVLYSIPKFRSIL 227
>AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical
protein F59E12.6b protein.
Length = 452
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2
Query: 347 EAELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLNY 475
E++ + G+ N ++C+++ VQ L VP+L + LLN+
Sbjct: 22 ESDTLAQSESSVGIFNSSSSCWLSCIVQLLIRVPQLESVLLNF 64
>AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical
protein F59E12.6a protein.
Length = 499
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2
Query: 347 EAELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLNY 475
E++ + G+ N ++C+++ VQ L VP+L + LLN+
Sbjct: 69 ESDTLAQSESSVGIFNSSSSCWLSCIVQLLIRVPQLESVLLNF 111
>U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical
protein T27A3.2 protein.
Length = 789
Score = 32.7 bits (71), Expect = 0.16
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2
Query: 383 GLINLGNTCYMNATVQCLKTV 445
GL+N G++CYMN+ +Q L TV
Sbjct: 320 GLVNTGSSCYMNSVLQALVTV 340
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 32.3 bits (70), Expect = 0.22
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 383 GLINLGNTCYMNATVQCL 436
G +N GNTCYMNA +Q L
Sbjct: 183 GYLNFGNTCYMNAVLQLL 200
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 32.3 bits (70), Expect = 0.22
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 386 LINLGNTCYMNATVQCLKTVPEL 454
L N GN+CY N+T+Q L + P L
Sbjct: 284 LYNTGNSCYFNSTMQALSSCPSL 306
>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical
protein H19N07.2c protein.
Length = 1135
Score = 30.3 bits (65), Expect = 0.87
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 383 GLINLGNTCYMNATVQCLKTVPELRNALLNYD 478
GL N G TCYMN+ +Q R A+ N D
Sbjct: 194 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMD 225
>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical
protein H19N07.2b protein.
Length = 1130
Score = 30.3 bits (65), Expect = 0.87
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 383 GLINLGNTCYMNATVQCLKTVPELRNALLNYD 478
GL N G TCYMN+ +Q R A+ N D
Sbjct: 194 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMD 225
>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical
protein H19N07.2a protein.
Length = 1133
Score = 30.3 bits (65), Expect = 0.87
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 383 GLINLGNTCYMNATVQCLKTVPELRNALLNYD 478
GL N G TCYMN+ +Q R A+ N D
Sbjct: 194 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMD 225
>U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical
protein C04E6.5 protein.
Length = 515
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +2
Query: 386 LINLGNTCYMNATVQCLKT 442
L+N GN+C++N+T+Q L +
Sbjct: 147 LVNTGNSCFLNSTMQALSS 165
>AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylating
with usp/ubp andotu domains protein 2 protein.
Length = 551
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +2
Query: 371 DMPEGLINLGNTCYMNATVQCLKT 442
++ + L+N GN+CY N+T+Q + +
Sbjct: 31 ELRKRLVNTGNSCYYNSTLQAMSS 54
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 28.3 bits (60), Expect = 3.5
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 386 LINLGNTCYMNATVQCLKT 442
L+N GN+CY N+T+Q + +
Sbjct: 216 LVNTGNSCYYNSTMQAVSS 234
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 350 AELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLNYDKSST 490
AEL ++D P GN CY AT Q + VP+ NA N + T
Sbjct: 7 AELYPSVD-PNHFGADGNPCYDRATRQPQRCVPDFVNAAFNLEVQVT 52
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 28.3 bits (60), Expect = 3.5
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 386 LINLGNTCYMNATVQCLKT 442
L+N GN+CY N+T+Q + +
Sbjct: 216 LVNTGNSCYYNSTMQAVSS 234
>AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical
protein F52G3.3 protein.
Length = 807
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +2
Query: 299 VPAAPVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLNY 475
VPA PVE+ +F E + E L + + C+MNA + L +R + +
Sbjct: 541 VPAEPVEEIQFDEPIEEQTLMPFLFLDNSFGQ--QNCFMNALLNMLFVSATIREKFVEF 597
>Z81526-3|CAB04261.2| 301|Caenorhabditis elegans Hypothetical
protein F33H2.6 protein.
Length = 301
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2
Query: 472 IEQGISKFRDRFQTLHCSIHVTSVTQVDETLWHIHGCSQFSFIHV 338
IE S+ FQ S+ + D T WHI G FSF ++
Sbjct: 160 IEGNKSRIEKSFQVRKHLEKALSIFENDPTTWHILGVWHFSFANM 204
>Z81077-7|CAB03070.2| 116|Caenorhabditis elegans Hypothetical
protein F36A2.8 protein.
Length = 116
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 358 GYSHGYARGSHQLG*HLLHECY 423
GYS+GY R HQ+ +L + Y
Sbjct: 83 GYSYGYGRADHQIAVDILKQKY 104
>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical
protein F54E4.1 protein.
Length = 2948
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 421 SIHV-TSVTQVDETLWHIHGCSQFSFIHVFDKTCLFHWCCGHVF 293
+IHV TS LWH+ Q SF HV T + CGH F
Sbjct: 610 TIHVLTSHDNGTLNLWHMSVDDQSSFSHVVSMTHISR-MCGHRF 652
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
protein F52B5.3 protein.
Length = 1425
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +2
Query: 116 VEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDDTW 238
+E D V + QI A+TG QP K ++ W
Sbjct: 359 IESRAFDVKVFYLDQILAMTGYQPPESKAFFSTAEYEEEDW 399
>AL023835-12|CAA19484.1| 412|Caenorhabditis elegans Hypothetical
protein Y37A1B.13 protein.
Length = 412
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 325 CLFHWCCGHVFLFTAHDKY 269
CLF+ CCG +F H Y
Sbjct: 107 CLFYTCCGETDIFNYHALY 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,438,811
Number of Sequences: 27780
Number of extensions: 270544
Number of successful extensions: 741
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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