Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309H03f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11394| Best HMM Match : GntR (HMM E-Value=7.9) 42 3e-04
SB_28212| Best HMM Match : C1_3 (HMM E-Value=0.59) 42 3e-04
SB_59684| Best HMM Match : C1_3 (HMM E-Value=8.3) 40 0.001
SB_1652| Best HMM Match : Keratin_B2 (HMM E-Value=0.031) 39 0.002
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18) 36 0.027
SB_41261| Best HMM Match : Metallothio_11 (HMM E-Value=0.74) 34 0.062
SB_24840| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_54687| Best HMM Match : Trp_Tyr_perm (HMM E-Value=2.2) 33 0.14
SB_7650| Best HMM Match : SLR1-BP (HMM E-Value=0.71) 33 0.19
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_41690| Best HMM Match : DSL (HMM E-Value=0) 31 0.44
SB_15981| Best HMM Match : Defensin_2 (HMM E-Value=1.1) 31 0.44
SB_33149| Best HMM Match : DSL (HMM E-Value=5.60519e-45) 31 0.44
SB_26778| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_8486| Best HMM Match : Granulin (HMM E-Value=0) 31 0.44
SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09) 28 0.56
SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_32009| Best HMM Match : PKD (HMM E-Value=1.9e-19) 30 1.0
SB_12699| Best HMM Match : TNFR_c6 (HMM E-Value=3.5e-05) 30 1.0
SB_59145| Best HMM Match : Keratin_B2 (HMM E-Value=0.0012) 30 1.0
SB_58407| Best HMM Match : TNFR_c6 (HMM E-Value=3.5e-05) 30 1.0
SB_56589| Best HMM Match : zf-C4_Topoisom (HMM E-Value=1.1) 30 1.0
SB_49425| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_48885| Best HMM Match : DUF741 (HMM E-Value=0.88) 30 1.3
SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09) 30 1.3
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23) 30 1.3
SB_54885| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_24975| Best HMM Match : ET (HMM E-Value=1) 29 1.8
SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45) 29 2.3
SB_13393| Best HMM Match : Keratin_B2 (HMM E-Value=0.19) 29 2.3
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1) 29 3.1
SB_16934| Best HMM Match : Ldl_recept_b (HMM E-Value=1.7e-39) 29 3.1
SB_28123| Best HMM Match : zf-NF-X1 (HMM E-Value=0.24) 29 3.1
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_41973| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_21208| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_16878| Best HMM Match : Keratin_B2 (HMM E-Value=0.19) 28 4.1
SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_59233| Best HMM Match : Involucrin (HMM E-Value=2.5) 28 5.4
SB_38826| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 5.4
SB_54394| Best HMM Match : Keratin_B2 (HMM E-Value=1.1) 28 5.4
SB_44426| Best HMM Match : Lectin_legB (HMM E-Value=4.8) 28 5.4
SB_17447| Best HMM Match : zf-B_box (HMM E-Value=0.04) 28 5.4
SB_17959| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_12737| Best HMM Match : C_tripleX (HMM E-Value=0.027) 27 7.1
SB_59375| Best HMM Match : TPR_2 (HMM E-Value=7.3e-06) 27 7.1
SB_41325| Best HMM Match : SWIM (HMM E-Value=0.015) 27 7.1
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 27 7.1
SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_52148| Best HMM Match : EGF (HMM E-Value=0) 27 9.4
SB_44587| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0) 27 9.4
SB_33054| Best HMM Match : DEAD (HMM E-Value=0.42) 27 9.4
SB_29302| Best HMM Match : LRR_1 (HMM E-Value=1.1e-11) 27 9.4
SB_6056| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-14) 27 9.4
SB_59679| Best HMM Match : Lectin_C (HMM E-Value=5.3e-10) 27 9.4
SB_41995| Best HMM Match : ANF_receptor (HMM E-Value=0) 27 9.4
SB_35930| Best HMM Match : SNF2_N (HMM E-Value=1.3004e-42) 27 9.4
SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6) 27 9.4
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_11394| Best HMM Match : GntR (HMM E-Value=7.9)
Length = 451
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
Frame = +1
Query: 208 SCRSPCCNSICCSYSCTLRC----TFCCSNRCGT-SC---CPSSGILCCFA-ILCWCCSN 360
SCR CC+ YSC + C CCS R SC C S + CC ++C+ C
Sbjct: 145 SCRVACCSCRVVCYSCRVACCSCRVACCSCRVVCYSCRVVCYSCRVACCSCRVVCYSCRV 204
Query: 361 PASGSLHSPCSC---CICCRLPIWS 426
+ CSC C CR+ +S
Sbjct: 205 VFCSCRVACCSCRVVCYSCRVVCYS 229
Score = 41.1 bits (92), Expect = 5e-04
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Frame = +1
Query: 208 SCRSPCCNSICCSYSCTL---RC-TFCCSNR-----CGTSCCPSSGILCCFAILCWCCSN 360
SCR CC+ YSC + C CCS R C +CC C ++C+ C
Sbjct: 124 SCRIACCSCRVVCYSCRVVFCSCRVACCSCRVVCYSCRVACCSCRVACCSCRVVCYSCRV 183
Query: 361 PASGSLHSPCSCCICC 408
+ CSC + C
Sbjct: 184 VCYSCRVACCSCRVVC 199
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 208 SCRSPCCNSICCSYSCTLRCTFCCSNRCGTSC---CPSSGILCCFA-ILCWCC 354
SCR CC+ YSC + C C + +SC C S + CC ++C+ C
Sbjct: 243 SCRVACCSCRVVCYSCRVACCSCRVHMKCSSCRVVCSSCRVACCSCRVVCYSC 295
Score = 37.5 bits (83), Expect = 0.007
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +1
Query: 208 SCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSP 387
SCR CC+ YSC R FC C +CC + ++C+ C A S
Sbjct: 187 SCRVACCSCRVVCYSC--RVVFC---SCRVACCSCRVVCYSCRVVCYSC-RVACCSCRVV 240
Query: 388 C-SC---CICCRLPIWS 426
C SC C CR+ +S
Sbjct: 241 CYSCRVACCSCRVVCYS 257
Score = 37.5 bits (83), Expect = 0.007
Identities = 21/67 (31%), Positives = 27/67 (40%)
Frame = +1
Query: 208 SCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSP 387
SCR CC+ YSC + C CS R C + C + C C S +
Sbjct: 229 SCRVACCSCRVVCYSCRVAC---CSCRVVCYSCRVACCSCRVHMKCSSCRVVCSSCRVAC 285
Query: 388 CSCCICC 408
CSC + C
Sbjct: 286 CSCRVVC 292
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +1
Query: 235 ICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPCSCCICC 408
+C +Y+ + CCS C +CC S ++CC + C A L P CC
Sbjct: 363 LCVAYAVVV----CCS--CRVACC-SCRVVCCSCRVVCCSCRVAHAVLRVPHGAVACC 413
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +1
Query: 208 SCRSPCCNSICCSYSCTLRCTFCCSNRCGTSC--CPSSGILCC 330
SCR CC+ C C+ R CCS R + P + CC
Sbjct: 374 SCRVACCS--CRVVCCSCR-VVCCSCRVAHAVLRVPHGAVACC 413
>SB_28212| Best HMM Match : C1_3 (HMM E-Value=0.59)
Length = 218
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 8/76 (10%)
Frame = +1
Query: 211 CRSPCCNS---ICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLH 381
CR CC + + C C +RC CC RC +CC + CC CC
Sbjct: 22 CRVMCCVACFVMHCVACCVMRCVACCVMRC-VACCVMRCVACCVMHCVACCVMRCVACRV 80
Query: 382 SPC-SC----CICCRL 414
C +C C+ CR+
Sbjct: 81 MRCVACRVMRCVACRV 96
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Frame = +1
Query: 205 RSCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHS 384
R R C +CC + C CC RC +CC + CC CC
Sbjct: 87 RVMRCVACRVMCCVACFVMHCVACCVMRC-VACCVMRCVACCVMRCVGCCVMRCVACRVM 145
Query: 385 PC-SCCI 402
C +CC+
Sbjct: 146 RCVACCV 152
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Frame = +1
Query: 205 RSCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHS 384
R R C +CC + C CC RC +CC + CC CC +H
Sbjct: 15 RVMRCVGCRVMCCVACFVMHCVACCVMRC-VACCVMRCVACCVMRCVACC------VMHC 67
Query: 385 PCSC---CICCRL 414
C C+ CR+
Sbjct: 68 VACCVMRCVACRV 80
Score = 34.3 bits (75), Expect = 0.062
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = +1
Query: 238 CCSYSCT----LRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 354
CC C +RC CC RC +CC + CC ++ +CC
Sbjct: 134 CCVMRCVACRVMRCVACCVMRC-VACCVMRCVDCC--VVTFCC 173
Score = 33.9 bits (74), Expect = 0.082
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +1
Query: 223 CCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 354
CC C C +RC C RC +CC + CC CC
Sbjct: 126 CCVMRCVG-CCVMRCVACRVMRC-VACCVMRCVACCVMRCVDCC 167
Score = 33.9 bits (74), Expect = 0.082
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 214 RSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCF 333
R C + C C +RC CC RC CC + CC+
Sbjct: 138 RCVACRVMRCVACCVMRCVACCVMRC-VDCCVVT--FCCY 174
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Frame = +1
Query: 238 CCSYSC----TLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPCSCCIC 405
CC C +RC CC C +CC + C + C C + CC+
Sbjct: 46 CCVMRCVACCVMRCVACCVMHC-VACCVMR-CVACRVMRCVACR--VMRCVACRVMCCVA 101
Query: 406 C 408
C
Sbjct: 102 C 102
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +1
Query: 208 SCRSPCCNSIC---CSYSCTLRCTFCCSNRCGTSCCPSSG 318
+CR C + C C C +RC CC T CC SG
Sbjct: 141 ACRVMRCVACCVMRCVACCVMRCVDCC---VVTFCCYPSG 177
>SB_59684| Best HMM Match : C1_3 (HMM E-Value=8.3)
Length = 138
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Frame = +1
Query: 205 RSCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHS 384
R R C +CC + C CC RC +CC + CC CC
Sbjct: 7 RVMRCVGCRVMCCVACFVMHCVACCVMRC-VACCVMRCVACCVMRCVGCCVMRCVACRVM 65
Query: 385 PC-SCCI 402
C +CC+
Sbjct: 66 RCVACCV 72
Score = 34.3 bits (75), Expect = 0.062
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = +1
Query: 238 CCSYSCT----LRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 354
CC C +RC CC RC +CC + CC ++ +CC
Sbjct: 54 CCVMRCVACRVMRCVACCVMRC-VACCVMRCVDCC--VVTFCC 93
Score = 33.9 bits (74), Expect = 0.082
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +1
Query: 223 CCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 354
CC C C +RC C RC +CC + CC CC
Sbjct: 46 CCVMRCVG-CCVMRCVACRVMRC-VACCVMRCVACCVMRCVDCC 87
Score = 33.9 bits (74), Expect = 0.082
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 214 RSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCF 333
R C + C C +RC CC RC CC + CC+
Sbjct: 58 RCVACRVMRCVACCVMRCVACCVMRC-VDCCVVT--FCCY 94
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +1
Query: 208 SCRSPCCNSIC---CSYSCTLRCTFCCSNRCGTSCCPSSG 318
+CR C + C C C +RC CC T CC SG
Sbjct: 61 ACRVMRCVACCVMRCVACCVMRCVDCC---VVTFCCYPSG 97
>SB_1652| Best HMM Match : Keratin_B2 (HMM E-Value=0.031)
Length = 563
Score = 39.1 bits (87), Expect = 0.002
Identities = 27/89 (30%), Positives = 38/89 (42%)
Frame = +1
Query: 211 CRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPC 390
C PCC +CC+ SC R C + SCC + C A+LC S A C
Sbjct: 352 CVVPCCVVLCCAVSC--RAVLCRA----VSCC----AVLCRAVLCRAVSCRAVLCRAVLC 401
Query: 391 SCCICCRLPIWSSTSSTFPVWICTSVCSI 477
+ CR+ + + S VW C +C +
Sbjct: 402 -LAVLCRVVLCRAVSCC-TVWCCVVLCRV 428
Score = 35.1 bits (77), Expect = 0.035
Identities = 25/97 (25%), Positives = 35/97 (36%), Gaps = 6/97 (6%)
Frame = +1
Query: 163 RQQGIESFDSSTGLRSCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSG---ILCCF 333
R G + D + G S + + C LR CC C C + +LCC
Sbjct: 294 RLAGDDGCDRNRGFYYFTSELSSQLLCFTVLALRVVTCCVVLCCAVLCRAVSCRVVLCCV 353
Query: 334 AILC--WCCSNPASGSLHSPCSCC-ICCRLPIWSSTS 435
C CC+ L SCC + CR + + S
Sbjct: 354 VPCCVVLCCAVSCRAVLCRAVSCCAVLCRAVLCRAVS 390
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +1
Query: 211 CRSPCCNSICC-SYSCTLRC--TFCCSNRCGTSCCPSSGILCCFAILC 345
C PCC +CC C + C C C + C + CC A+ C
Sbjct: 462 CVVPCCVVLCCVVLYCVVLCRVVLCRDVLCRAALCRVVQLSCC-AVSC 508
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 38.3 bits (85), Expect = 0.004
Identities = 29/92 (31%), Positives = 34/92 (36%), Gaps = 3/92 (3%)
Frame = +1
Query: 208 SCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWC---CSNPASGSL 378
SC S CC ++ C C SC P I CC L C CS G+
Sbjct: 1323 SCPSECCLTVLTPLKENKSHQEGCPAVCSESCKPDCPIKCCSNALSSCPQSCSGDHCGA- 1381
Query: 379 HSPCSCCICCRLPIWSSTSSTFPVWICTSVCS 474
P CC+ SST+S C S CS
Sbjct: 1382 ECPTQCCLLADNGQHSSTAS------CPSACS 1407
Score = 35.5 bits (78), Expect = 0.027
Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 5/95 (5%)
Frame = +1
Query: 211 CRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCC--FAILCWCCSNPASGSLHS 384
C S CC +I T C + C SC P+ I CC AI C + S
Sbjct: 1471 CPSKCCLTILEPLQEGPNATAYCPSDCFESCKPNCPIKCCPATAIKCPVGCSEHSCKPEC 1530
Query: 385 PCSCCICCRLPI---WSSTSSTFPVWICTSVCSID 480
P CC+ P ++ +S PV+ C + C D
Sbjct: 1531 PSKCCMKVLPPTTLGQNTANSLCPVY-CLTSCKPD 1564
Score = 35.1 bits (77), Expect = 0.035
Identities = 27/91 (29%), Positives = 38/91 (41%)
Frame = +1
Query: 208 SCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSP 387
SC S CC +I S + +F C +C TSC P + CC S + S
Sbjct: 1589 SCPSICCITIRGSAKEEQQNSFECPVKCLTSCEPECPVRCCSG--SQTLDLGVSKTCPSW 1646
Query: 388 CSCCICCRLPIWSSTSSTFPVWICTSVCSID 480
CS C+ + +T P+ C + CS D
Sbjct: 1647 CSVS-SCKPDCPARCCTTEPLSACPATCSPD 1676
Score = 33.1 bits (72), Expect = 0.14
Identities = 17/77 (22%), Positives = 30/77 (38%)
Frame = +1
Query: 211 CRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPC 390
C + CC ++ + T C + C +C P + CC C P++ P
Sbjct: 1415 CPARCCITVLQPLNEKHNTTAECPSECSETCKPECPVKCCTG-ECPAGCLPSNCKPDCPS 1473
Query: 391 SCCICCRLPIWSSTSST 441
CC+ P+ ++T
Sbjct: 1474 KCCLTILEPLQEGPNAT 1490
Score = 33.1 bits (72), Expect = 0.14
Identities = 32/92 (34%), Positives = 37/92 (40%), Gaps = 5/92 (5%)
Frame = +1
Query: 211 CRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPC 390
C CC S S T C C +C P + CC ++ SN A + HS C
Sbjct: 2193 CPVKCCESSTAP-STKEYSTDECPEICSHNCLPFCPVKCCAVVV---PSNQAEAT-HSSC 2247
Query: 391 -SCCICCRLPIWSS---TSSTF-PVWICTSVC 471
S C LP S TSST PV TS C
Sbjct: 2248 PSVCSTTCLPFCPSKCCTSSTVTPVQPTTSSC 2279
Score = 32.7 bits (71), Expect = 0.19
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +1
Query: 205 RSCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCC 306
RSC C CC C + C C C CC
Sbjct: 1180 RSCEEGCPEQ-CCQNGCPVECLSSCKPHCPPRCC 1212
Score = 32.3 bits (70), Expect = 0.25
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Frame = +1
Query: 142 IRCTS*YRQQGIESFDSSTGLRSCRSPCCNSICCSYSCTLRCTFCCSNRCG-TSCCPSSG 318
+RC S Q ++ S T C C C + CT C C SC P
Sbjct: 1626 VRCCS--GSQTLDLGVSKTCPSWCSVSSCKPDCPARCCTTEPLSACPATCSPDSCRPECP 1683
Query: 319 ILCCFAILCWCCSNPASGSLHSPCSCC 399
++CC ++ CS + G+ P CC
Sbjct: 1684 LICC-SVCPPNCSAQSCGNF-CPPKCC 1708
Score = 31.9 bits (69), Expect = 0.33
Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 5/65 (7%)
Frame = +1
Query: 232 SICCSYSCTLRCTF-CCSNRCG----TSCCPSSGILCCFAILCWCCSNPASGSLHSPCSC 396
SI C SC C CC N C +SC P CCF +L N S P C
Sbjct: 1175 SIMCKRSCEEGCPEQCCQNGCPVECLSSCKPHCPPRCCFTVLIPIADN-QSVKEKCPAVC 1233
Query: 397 CICCR 411
C+
Sbjct: 1234 KETCK 1238
Score = 31.9 bits (69), Expect = 0.33
Identities = 27/88 (30%), Positives = 31/88 (35%), Gaps = 6/88 (6%)
Frame = +1
Query: 226 CNSIC---CSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSN-PASGSLHSPC- 390
C C C SC L+ C C C P CCFA+L N S S C
Sbjct: 1233 CKETCKPECPLSCCLKDARGCPATCVEDCKPGCPPECCFAVLKPIQENREHSQSCPKICF 1292
Query: 391 -SCCICCRLPIWSSTSSTFPVWICTSVC 471
SC C + S S+ P T C
Sbjct: 1293 TSCKPSCPVHCCSEHSNACPQECSTDNC 1320
Score = 31.9 bits (69), Expect = 0.33
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 11/65 (16%)
Frame = +1
Query: 202 LRSCRSPCC--NS--ICCSYSCTLRCT-----FCCSNRCGTSCCPSSGILCCFAILC--W 348
L SC S CC NS + C SC CT CC N + CP+ C + C
Sbjct: 1782 LPSCPSTCCIKNSPPVVCPKSCETTCTPDCPVMCCKNSSPATECPTICASKCIS-KCPEK 1840
Query: 349 CCSNP 363
CC P
Sbjct: 1841 CCKQP 1845
Score = 30.7 bits (66), Expect = 0.76
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 6/63 (9%)
Frame = +1
Query: 241 CSYSCTLRCTF-CCSNRCGTSCCPSS-----GILCCFAILCWCCSNPASGSLHSPCSCCI 402
CS +C C CC+ C C PS+ CC IL P + + + P C
Sbjct: 1441 CSETCKPECPVKCCTGECPAGCLPSNCKPDCPSKCCLTILEPLQEGP-NATAYCPSDCFE 1499
Query: 403 CCR 411
C+
Sbjct: 1500 SCK 1502
Score = 30.3 bits (65), Expect = 1.0
Identities = 26/99 (26%), Positives = 35/99 (35%), Gaps = 10/99 (10%)
Frame = +1
Query: 211 CRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPA----SGSL 378
C C S C C ++C S+ C C P + C +I C A S
Sbjct: 1553 CPVYCLTS--CKPDCPIKCCTKLSSSCPADCSPQNCKSSCPSICCITIRGSAKEEQQNSF 1610
Query: 379 HSPCSCCICC--RLPI-WSSTSSTFPVWI---CTSVCSI 477
P C C P+ S S T + + C S CS+
Sbjct: 1611 ECPVKCLTSCEPECPVRCCSGSQTLDLGVSKTCPSWCSV 1649
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 8/73 (10%)
Frame = +1
Query: 217 SPCCNSIC---CSYSCTLRC----TFCCSNRCGT-SCCPSSGILCCFAILCWCCSNPASG 372
S C IC C SC + C + C C T +C PS CC +L N S
Sbjct: 1284 SQSCPKICFTSCKPSCPVHCCSEHSNACPQECSTDNCKPSCPSECCLTVLTPLKEN-KSH 1342
Query: 373 SLHSPCSCCICCR 411
P C C+
Sbjct: 1343 QEGCPAVCSESCK 1355
Score = 28.3 bits (60), Expect = 4.1
Identities = 23/88 (26%), Positives = 36/88 (40%)
Frame = +1
Query: 208 SCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSP 387
+C+ P C +I S + +L C C T C PS CC + + +P
Sbjct: 1751 ACK-PGCITIEDSVTVSLGNDKLCPEACLTKCLPSCPSTCCIKNSPPVVCPKSCETTCTP 1809
Query: 388 CSCCICCRLPIWSSTSSTFPVWICTSVC 471
+CC+ +S+ +T IC S C
Sbjct: 1810 DCPVMCCK----NSSPATECPTICASKC 1833
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/62 (25%), Positives = 23/62 (37%)
Frame = +1
Query: 250 SCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPCSCCICCRLPIWSS 429
+C++ C C C CC + C + C P H P CC +PI +
Sbjct: 1173 TCSIMCKRSCEEGCPEQCCQNG---C--PVECLSSCKP-----HCPPRCCFTVLIPIADN 1222
Query: 430 TS 435
S
Sbjct: 1223 QS 1224
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +1
Query: 211 CRSPCCNSICCSYSCTLRCT--FCCSNRCGTSCCPSSGILCC 330
C CC+++ S + + C + C SC P I CC
Sbjct: 2082 CPVKCCSALAKQVSILVHNSRKLICPSHCEKSCEPDCPIRCC 2123
>SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18)
Length = 1023
Score = 35.5 bits (78), Expect = 0.027
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Frame = -2
Query: 385 ESVGSRWQDWSSTSIVWRSSIGCRYWGSKRCRTYWSSKRCSVGCSYRSSKWSCNRGYGRS 206
E W+DWS +V S C S S + G S S+ SC+ GY +
Sbjct: 205 EKFNFHWEDWSFRDVV-PSERNCAGNSSAPTPCVAGSANSNTGSSDSSACVSCSAGYNAT 263
Query: 205 EG----RCCYQRTQCPAGDINLCS 146
EG C +C G +LC+
Sbjct: 264 EGSTACSACPAGYECSVGTASLCT 287
>SB_41261| Best HMM Match : Metallothio_11 (HMM E-Value=0.74)
Length = 328
Score = 34.3 bits (75), Expect = 0.062
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Frame = +1
Query: 214 RSPCCNSICCSYSCTLRCTFCCSNRCGTSC-----CPSSGILCC-FAILCWCCS 357
R+ C ++CC +C RC+ C C +C C LCC F LC CS
Sbjct: 217 RADCYVNLCCCVTC--RCSVCTCCPCDCTCLQCAPCIVFSALCCPFWSLCLLCS 268
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +1
Query: 328 CFAILCWCCSNPASGSLHSPCSC-CICCRLPIWSSTSSTFPVWICTSVCSI 477
C+ LC C + S PC C C+ C P ++ P W +CS+
Sbjct: 220 CYVNLCCCVTCRCSVCTCCPCDCTCLQC-APCIVFSALCCPFWSLCLLCSM 269
>SB_24840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +1
Query: 214 RSPCCNSICCSYSCTLRCTFCCSNRCG-TSCCPS---SGILCCFAILCWCCS 357
R+ C ++CC +C CC C C P S + C F LC CS
Sbjct: 217 RADCYVNLCCCVTCRCSVCTCCPCDCPCLQCAPCIVFSALCCPFWSLCLLCS 268
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +1
Query: 328 CFAILCWCCSNPASGSLHSPCSC-CICCRLPIWSSTSSTFPVWICTSVCSI 477
C+ LC C + S PC C C+ C P ++ P W +CS+
Sbjct: 220 CYVNLCCCVTCRCSVCTCCPCDCPCLQC-APCIVFSALCCPFWSLCLLCSM 269
>SB_54687| Best HMM Match : Trp_Tyr_perm (HMM E-Value=2.2)
Length = 369
Score = 33.1 bits (72), Expect = 0.14
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +1
Query: 265 CTFCCSNRC--GTSCCPSSGILCCFAILCWCCSNPASGS 375
C F C +C GT C ++ C LC C NP S +
Sbjct: 2 CIFNCIGKCIGGTCKCVGKSLMACLRGLCKCFCNPVSAA 40
>SB_7650| Best HMM Match : SLR1-BP (HMM E-Value=0.71)
Length = 439
Score = 32.7 bits (71), Expect = 0.19
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = -2
Query: 391 SRESVGSRWQDWSSTSIVWRSSIGCRYWGSKRCRTYWSSKRCSVGCSYR--SSKWS--CN 224
+ + V +R Q +V ++I +GS S +R C +R +SK + CN
Sbjct: 21 TEQVVSARHQGGDDLVLVAHNTILLLVFGSLVIIGLGSERRACADCLHRCGTSKDASICN 80
Query: 223 RG--YGRSEGRCC 191
RG YGR+ GRCC
Sbjct: 81 RGIGYGRTRGRCC 93
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 31.5 bits (68), Expect = 0.44
Identities = 20/88 (22%), Positives = 30/88 (34%), Gaps = 2/88 (2%)
Frame = +1
Query: 220 PCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPCSCC 399
PCC S+ + C C S CP + C + C CC + + PC
Sbjct: 102 PCCMSLL---RVRVACPCCVSVLRVLIACPCWVSVLCVRVACPCCVSVLRVRVGCPCWVY 158
Query: 400 ICCRLPIWSSTSSTFPVW--ICTSVCSI 477
+C P W +CT ++
Sbjct: 159 VCTGCVSVLRVRVVCPCWVYVCTGCVAV 186
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/63 (25%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Frame = +1
Query: 220 PCCNSIC--CSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPCS 393
PC +C C L C S C CP + + C CC + + C
Sbjct: 174 PCWVYVCTGCVAVAVLCFRVCLSLLCVRFVCPCCMSVLYVRVACPCCMSVL--RVRVACP 231
Query: 394 CCI 402
CC+
Sbjct: 232 CCV 234
>SB_41690| Best HMM Match : DSL (HMM E-Value=0)
Length = 2798
Score = 31.5 bits (68), Expect = 0.44
Identities = 27/106 (25%), Positives = 40/106 (37%), Gaps = 6/106 (5%)
Frame = -2
Query: 307 GSKRCRTYWSSKRCSVGCSYRSSK---WSCNRGYGRSEGRCCYQRTQCPAGDINLCSVWR 137
G K C T W + C+ C+ R+ +SCN G + C+ CS++
Sbjct: 1094 GKKHCLTSWYGENCTAYCTPRNDSTGHFSCNETTGSKD---CHDGWYG-----GTCSIY- 1144
Query: 136 NVLRYSLSVSHVGWSNQRSSGYC---WNSCDCTRFSSNYKGSSDEY 8
L ++ S H C W +CT F S + S D Y
Sbjct: 1145 -CLPHNGSSGHYDCDASSGRKTCHVDWYGINCTVFCSKPRDSKDHY 1189
Score = 30.7 bits (66), Expect = 0.76
Identities = 28/109 (25%), Positives = 39/109 (35%), Gaps = 8/109 (7%)
Frame = -2
Query: 307 GSKRCRTYWSSKRCSVGCSYRSS---KWSCNRGYGRSEGRCCYQRTQCPA-GDINLCSVW 140
GSK C W + C+V C +SS +SC+ G + C L
Sbjct: 1026 GSKLCHPDWFGENCTVHCKAQSSDNQNYSCDNATGSKICHSNWYGENCTVYCKAQLSDHQ 1085
Query: 139 RNVLRYSLSVSH--VGWSNQRSSGYCWNSCDCT-RFSSN-YKGSSDEYD 5
+ + H W + + YC D T FS N GS D +D
Sbjct: 1086 HYICDNTTGKKHCLTSWYGENCTAYCTPRNDSTGHFSCNETTGSKDCHD 1134
Score = 27.9 bits (59), Expect = 5.4
Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 10/102 (9%)
Frame = -2
Query: 307 GSKRCRTYWSSKRCSVGC---SYRSSKWSCNRGYGRSEGRCCYQRTQCPAGDINLCSVWR 137
G K C W + C + C + S +SCN G + C DI
Sbjct: 435 GEKICHAGWYGRLCDIYCIPTNDSSGHYSCNATTGEKICHAGWYGNLC---DIYCIPTND 491
Query: 136 NVLRYSLS------VSHVGWSNQRSSGYCWNSCDCT-RFSSN 32
+ YS + V HVGW + YC + D + +S N
Sbjct: 492 SSGHYSCNATTGEKVCHVGWHGKLCDTYCIPTIDSSGHYSCN 533
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/86 (20%), Positives = 28/86 (32%), Gaps = 3/86 (3%)
Frame = -2
Query: 316 RYWGSKRCRTYWSSKRCSVGCSYRSSKWSCNRGYGRSEGRCCYQRTQCPAGDINLCSVWR 137
R G K C W C++ C +SCN G + C I+
Sbjct: 265 RTTGEKICLKSWFGTLCTIYCDESKGNYSCNATTGEKICHAGWYGNLCDTYCISTNDSSG 324
Query: 136 NVLRYSLS---VSHVGWSNQRSSGYC 68
+ + + + H GW + YC
Sbjct: 325 HYTCNATTGEKICHAGWYGRLCDTYC 350
>SB_15981| Best HMM Match : Defensin_2 (HMM E-Value=1.1)
Length = 890
Score = 31.5 bits (68), Expect = 0.44
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 214 RSPCCNSICCSYSCTL-RCTFCCSNRCGTSCCPSSGILCCFAILCWCCS 357
+S S CC +CT +C CS+R T ++ I C ++L C S
Sbjct: 559 KSRLLTSACCCKTCTRPKCAIHCSSRRQTKTSGNTKICACPSLLLACTS 607
>SB_33149| Best HMM Match : DSL (HMM E-Value=5.60519e-45)
Length = 443
Score = 31.5 bits (68), Expect = 0.44
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Frame = -2
Query: 319 CRYWGSKRCRTYWSSKRCSVGCSYRSSKWSCNRGYGRS------EGRCCYQRTQCPAGDI 158
C G+++C+ +W ++C V C R +++C G G C T C A D
Sbjct: 234 CLANGTRKCQQHWYGQQCHVFCQPRPIQYTCQSTTGAKVCSQGWYGEDC--STFCKARDS 291
Query: 157 NLCSVWRNVLRYSLSVSHVGWSNQRSSGYC 68
+ + + R V H+ W YC
Sbjct: 292 DWFGHF-DCDRNGSRVCHMYWHGPECKAYC 320
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -2
Query: 307 GSKRCRTYWSSKRCSVGCSYRSSK---WSCNRGYGRSE 203
G K C W + C+V CS R+ ++CN G E
Sbjct: 174 GQKICYPGWYGRNCNVACSPRNDSTGHYNCNADTGAKE 211
>SB_26778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1050
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -2
Query: 307 GSKRCRTYWSSKRCSVGCSYRSSKWSCNRGYGRSEGRCCYQRTQC 173
G K C W C V C+ SS ++CN+ G + T C
Sbjct: 694 GQKVCHRDWYGPFCDVNCNSNSSHFTCNKTTGARVCHSNWYGTYC 738
Score = 27.9 bits (59), Expect = 5.4
Identities = 33/110 (30%), Positives = 42/110 (38%), Gaps = 6/110 (5%)
Frame = -2
Query: 319 CRYWGSKRCRTYWSSKRCSVGCSYR---SSKWSCNRGYGRSEGRCCYQRTQCPAGDINLC 149
C GSK C W C V C R S +SCN G + C + GD C
Sbjct: 490 CSVNGSKVCHREWYGATCDVHCVPRNDSSGHFSCNTTSGE---KVCLRDWY---GD--RC 541
Query: 148 SVWRNVLRYSLSVSHVGWSNQRSSGYC---WNSCDCTRFSSNYKGSSDEY 8
++ L + S+ H N + C W CT F N K SS+ Y
Sbjct: 542 EIF--CLSRNDSLGHYS-CNANGTKVCHKDWYGDLCTTFCKN-KDSSEHY 587
>SB_8486| Best HMM Match : Granulin (HMM E-Value=0)
Length = 878
Score = 31.5 bits (68), Expect = 0.44
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 268 TFCCSNRC-GTSCCPSSGILCCFAILCWCCSNPASGSLHSPCSCCICCRLPI 420
T CC R G +CCP +CC + CC N S L S R+PI
Sbjct: 562 TTCCKKRSGGYACCPIPKAVCC-SDEVHCCPNGYSCDLSSKKCVKGASRVPI 612
>SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09)
Length = 1103
Score = 28.3 bits (60), Expect(2) = 0.56
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 244 SYSCTLRCTFCCSNRCGTSCCPSSGIL 324
+Y C C F C C +CC G++
Sbjct: 753 AYVCKEECKFSCDLDCPENCCGPEGLM 779
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +1
Query: 208 SCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFA 336
SC + CC + R ++C C +C PS G CC A
Sbjct: 591 SCGTGCCKEHDANLLKKGRPSYC-HEMCLANCVPSCGSGCCSA 632
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = +1
Query: 229 NSICCSYSCTLRCTFCCSNRCGTSCC 306
N + +C C C CGT CC
Sbjct: 572 NKVWFKANCHPMCLVSCVGSCGTGCC 597
Score = 21.4 bits (43), Expect(2) = 0.56
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +1
Query: 217 SPCCNSICCSY 249
+P C+ ICC +
Sbjct: 713 APACSDICCGF 723
>SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1276
Score = 31.1 bits (67), Expect = 0.58
Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 7/102 (6%)
Frame = +1
Query: 187 DSSTGLRSCRSPCCNSICCSYSCTLRCTF---CCSNRCGTSCCPSSGILC----CFAILC 345
D+ +G PC + + SC + + CC C P +LC C+ +LC
Sbjct: 1044 DTVSGFGLLAVPCYALLSFAMSCYVVLSLAMSCCPLLC--RAIPCYDLLCLAMTCYDLLC 1101
Query: 346 WCCSNPASGSLHSPCSCCICCRLPIWSSTSSTFPVWICTSVC 471
A SL PC +C +P + S P C +C
Sbjct: 1102 LAVPCYALLSLAMPCCPLLCLAVPCYVVLSLAMP--CCPLLC 1141
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 6/68 (8%)
Frame = +1
Query: 223 CCNSICCSYSCTLRCTF---CCSNRCGTSCCPS--SGILCCFAILCWCC-SNPASGSLHS 384
CC +C + C + CC C C + S + C +LC S P+SG +
Sbjct: 1196 CCPLLCLAVPCYALLSLAMSCCPLLCRAVPCYALLSLAMSCCPLLCLAVQSGPSSGIFGA 1255
Query: 385 PCSCCICC 408
C C C
Sbjct: 1256 VCFCRYEC 1263
>SB_32009| Best HMM Match : PKD (HMM E-Value=1.9e-19)
Length = 3083
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = -2
Query: 328 SIGCRYWGSKRCRTYWSSKRCSVG---CSYRSSKWSCN 224
S+GCRYW S T W++K C VG S R +CN
Sbjct: 2195 SVGCRYW-SLASNT-WTTKGCKVGRRRSSGRQLSCTCN 2230
>SB_12699| Best HMM Match : TNFR_c6 (HMM E-Value=3.5e-05)
Length = 215
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +1
Query: 169 QGIESFDSSTGLRSCRSPC--CNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAIL 342
+GI +F +S CR PC C++ S CT+ C N+C IL
Sbjct: 56 EGI-NFSASYDQEQCR-PCYQCDNQLVSKECTVTSNRVCLNKCKPKSGMYFDILYQVCEP 113
Query: 343 C-WCCSN 360
C WCC +
Sbjct: 114 CSWCCGD 120
>SB_59145| Best HMM Match : Keratin_B2 (HMM E-Value=0.0012)
Length = 489
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 211 CRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCS 357
CR+ C +C C +RCT ++C +C P G C F CS
Sbjct: 439 CRARNCTQLCPRGGCRMRCT-SRVDKCVQACNPREG-QCRFECHAKSCS 485
Score = 27.5 bits (58), Expect = 7.1
Identities = 22/88 (25%), Positives = 29/88 (32%), Gaps = 12/88 (13%)
Frame = +1
Query: 211 CRSPCCNSICCSYSCTLRC------TFCCSNRCGTSCCPSSGILC---CFAILCWCCSNP 363
C S CN C C + C C S+ C + CP++ +C C C
Sbjct: 96 CSSRMCNQTCIRAGCKMECYGEECHQTCQSSGCDVT-CPAASKVCVQVCITGRCTMRCGR 154
Query: 364 ASGSLHSPC---SCCICCRLPIWSSTSS 438
G C C + C ST S
Sbjct: 155 GVGRCEQKCLAGKCAMICEARECVSTCS 182
>SB_58407| Best HMM Match : TNFR_c6 (HMM E-Value=3.5e-05)
Length = 511
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +1
Query: 169 QGIESFDSSTGLRSCRSPC--CNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAIL 342
+GI +F +S CR PC C++ S CT+ C N+C IL
Sbjct: 56 EGI-NFSASYDQEQCR-PCYQCDNQLVSKECTVTSNRVCLNKCKPKSGMYFDILYQVCEP 113
Query: 343 C-WCCSN 360
C WCC +
Sbjct: 114 CSWCCGD 120
>SB_56589| Best HMM Match : zf-C4_Topoisom (HMM E-Value=1.1)
Length = 743
Score = 30.3 bits (65), Expect = 1.0
Identities = 31/117 (26%), Positives = 45/117 (38%), Gaps = 2/117 (1%)
Frame = -2
Query: 400 CSRSRESVGSRWQDWSSTSIVWRSSIGCRYWGSKRCRTYWSSKRCSVGCSYRSSKWSCNR 221
C+R+R RW+D + ++W C ++R T W S R V S S R
Sbjct: 556 CARNRRYASQRWKDSAKAWLLW-----CP-GSARRTSTPW-SVRSFVVAPLNSVPSSTMR 608
Query: 220 GYGRSEGRC--CYQRTQCPAGDINLCSVWRNVLRYSLSVSHVGWSNQRSSGYCWNSC 56
G C + RT+ + V+R R V H + S+ YC N C
Sbjct: 609 TLGHPPTGCELTHLRTRSMEDEATSGVVYRTTERIEFFVGHALRRHYVSAMYC-NRC 664
>SB_49425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 429
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +1
Query: 226 CNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPC-SCC 399
C S+C + CT C S R S C S C ++C C A +HS C S C
Sbjct: 277 CVSLCAQCMRVVMCTVCAS-RYVHSVCVSLCTQCMRVVMCTVC---ACRYIHSVCVSLC 331
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +1
Query: 226 CNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCS 357
C S+C + CT C R G S C S C ++C C+
Sbjct: 385 CVSLCAQCVRVVMCTVCAC-RLGHSVCVSLCAQCVRVVMCTVCA 427
Score = 27.5 bits (58), Expect = 7.1
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 15/91 (16%)
Frame = +1
Query: 247 YSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCS----NPASGSLHSPCS------- 393
++ LRCT C R S C S C ++C C+ + SL S C
Sbjct: 218 FTVRLRCTVCAC-RYVHSVCVSFRSQCVRVVMCTVCACRYVHSVCVSLRSQCVRVIMYTV 276
Query: 394 ----CCICCRLPIWSSTSSTFPVWICTSVCS 474
C C R+ + + +S + +C S+C+
Sbjct: 277 CVSLCAQCMRVVMCTVCASRYVHSVCVSLCT 307
>SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2077
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +1
Query: 211 CRSPCCNSICCSYSCTLRCTFCCSNRCGTSC 303
CR+PC + C ++C C C R C
Sbjct: 1891 CRTPCNAKLKCLHTCAGNCNSCLQQRVHEQC 1921
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 10/58 (17%)
Frame = +1
Query: 211 CRSPCCNSICCSYS----CTLRCTFC---CSNRCGTSCCPS-SGILC--CFAILCWCC 354
C+S C ++ C +S CT C C C N+C S C + G C C W C
Sbjct: 1921 CKSKCDRTLFCGHSCQEPCTKNCPPCQKQCENKCEHSKCKNRCGEPCVPCAEPCAWEC 1978
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 8/64 (12%)
Frame = +1
Query: 241 CSYSC--TLRCTFCCSNRCGTSCCPSSGILCCFAILCW------CCSNPASGSLHSPCSC 396
C C TL+C C+ +CG C ++ + C C +P + +PC+
Sbjct: 1838 CQEPCPKTLKCGHQCAAKCGDDCTKECMVMIERTLPCGHKHTLKCHVDPTTVKCRTPCNA 1897
Query: 397 CICC 408
+ C
Sbjct: 1898 KLKC 1901
>SB_48885| Best HMM Match : DUF741 (HMM E-Value=0.88)
Length = 841
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/62 (24%), Positives = 22/62 (35%), Gaps = 6/62 (9%)
Frame = +1
Query: 187 DSSTGLRSCRSPCCNSI---CCS---YSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCW 348
+S ++ + CC + CC Y C T+ C CC CC +
Sbjct: 118 NSDVEIQEVKYDCCKEVKYDCCKEVKYDCCKDLTYECCKEVKYDCCKEVKYDCCKDLTYD 177
Query: 349 CC 354
CC
Sbjct: 178 CC 179
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/50 (28%), Positives = 17/50 (34%), Gaps = 6/50 (12%)
Frame = +1
Query: 223 CCNSI---CCS---YSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 354
CC + CC Y C T+ C CC CC + CC
Sbjct: 154 CCKEVKYDCCKEVKYDCCKDLTYDCCKEVQNDCCKEVKYDCCKDLTNDCC 203
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/50 (28%), Positives = 17/50 (34%), Gaps = 6/50 (12%)
Frame = +1
Query: 223 CCNSI---CCS---YSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 354
CC + CC Y C T+ C CC CC + CC
Sbjct: 309 CCKEVKYDCCKEVKYDCCKDLTYDCCKEVQNDCCKEVKYDCCKDLTNDCC 358
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/50 (28%), Positives = 17/50 (34%), Gaps = 6/50 (12%)
Frame = +1
Query: 223 CCNSI---CCS---YSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 354
CC + CC Y C T+ C CC CC + CC
Sbjct: 285 CCKEVKYDCCKEVKYDCCKDLTYECCKEVKYDCCKEVKYDCCKDLTYDCC 334
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/50 (24%), Positives = 18/50 (36%)
Frame = +1
Query: 205 RSCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 354
+ ++ CC + Y C T C + CC CC + CC
Sbjct: 335 KEVQNDCCKEV--KYDCCKDLTNDCCKKVQNDCCKEVKYDCCKDLTNDCC 382
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/50 (26%), Positives = 17/50 (34%), Gaps = 6/50 (12%)
Frame = +1
Query: 223 CCNSI---CC---SYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 354
CC + CC +Y C + C CC CC + CC
Sbjct: 138 CCKEVKYDCCKDLTYECCKEVKYDCCKEVKYDCCKDLTYDCCKEVQNDCC 187
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/44 (25%), Positives = 14/44 (31%)
Frame = +1
Query: 223 CCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 354
CC + Y C + C CC CC + CC
Sbjct: 277 CCKEV--KYDCCKEVKYDCCKEVKYDCCKDLTYECCKEVKYDCC 318
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/50 (26%), Positives = 17/50 (34%), Gaps = 6/50 (12%)
Frame = +1
Query: 223 CCNSI---CC---SYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 354
CC + CC +Y C + C CC CC + CC
Sbjct: 293 CCKEVKYDCCKDLTYECCKEVKYDCCKEVKYDCCKDLTYDCCKEVQNDCC 342
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/52 (23%), Positives = 19/52 (36%)
Frame = +1
Query: 205 RSCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSN 360
+ ++ CC + Y C T C + CC CC + CC +
Sbjct: 359 KKVQNDCCKEV--KYDCCKDLTNDCCKKVKYDCCKDVTNDCCKEVKYDCCKD 408
>SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09)
Length = 1084
Score = 29.9 bits (64), Expect = 1.3
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +1
Query: 211 CRSPCCNSICCSYSCTLRCTFCCSNRC 291
C PC ++ C + C +C C+++C
Sbjct: 361 CSEPCPKTLECGHPCARKCGDTCTSKC 387
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 29.9 bits (64), Expect = 1.3
Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 6/113 (5%)
Frame = -2
Query: 367 WQDWSSTSIVWRSSIGCRYWGSKRCRTYWSSKRCSVGCSYRSSKWS--CNRGYGRSEGRC 194
W + + W + Y + C + C C++ W+ C YG + C
Sbjct: 2057 WNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNC---CTHEYG-WNNCCTHEYGWNN--C 2110
Query: 193 C---YQRTQCPAGDINLCSVWRNVLRYSLSVSHV-GWSNQRSSGYCWNSCDCT 47
C Y C + + N R++ +H GWSN S Y W +C CT
Sbjct: 2111 CTHEYGWNNCCTHEYGWNNCCNNKYRWNNCYTHYNGWSNCCSHEYGWYNC-CT 2162
Score = 27.5 bits (58), Expect = 7.1
Identities = 26/113 (23%), Positives = 42/113 (37%), Gaps = 6/113 (5%)
Frame = -2
Query: 367 WQDWSSTSIVWRSSIGCRYWGSKRCRTYWSSKRCSVGCSYRSSKWS--CNRGYGRSEGRC 194
W + + W + Y + C + C C++ W+ C YG + C
Sbjct: 2067 WNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNC---CTHEYG-WNNCCTHEYGWNN--C 2120
Query: 193 C---YQRTQCPAGDINLCSVWRNVLRYSLSVSH-VGWSNQRSSGYCWNSCDCT 47
C Y C + + + +S SH GW N ++ Y WN+C CT
Sbjct: 2121 CTHEYGWNNCCNNKYRWNNCYTHYNGWSNCCSHEYGWYNCCTNEYGWNNC-CT 2172
>SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23)
Length = 1189
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +1
Query: 247 YSCTLRCTFCCSNRCGTSCCPSSGILC-CFAILCWCCS 357
YSC C F C +C CC ++ C + W C+
Sbjct: 932 YSCPSDCHFSCYPQCTPECCSTTPPTAQCPSSCAWTCA 969
Score = 29.9 bits (64), Expect = 1.3
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 211 CRSPCCNSICCSYSCTLRCTFCCSNRCGTSCC 306
C CC++ + C C + C+ C + CC
Sbjct: 946 CTPECCSTTPPTAQCPSSCAWTCAPDCTSECC 977
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +1
Query: 220 PCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCC 330
P C CCS T T C + C +C P CC
Sbjct: 944 PQCTPECCS---TTPPTAQCPSSCAWTCAPDCTSECC 977
>SB_54885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2988
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 325 IGCRYWGSKRCRTYWSSKRCSVGCSYRSSKWSC 227
+GC YW + WS++ C VG + SS+ C
Sbjct: 1786 VGCMYWDE--VQENWSTRGCRVGPNTSSSRTHC 1816
>SB_24975| Best HMM Match : ET (HMM E-Value=1)
Length = 316
Score = 29.5 bits (63), Expect = 1.8
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = +1
Query: 226 CNSICCSYSCTLRCTFC-CSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPCSCCI 402
C+S C S + T C C ++C S + I C C S S + H+P + CI
Sbjct: 208 CDSQCISDTQHTPVTQCICDSQC-ISDTQHTPITQCI-----CDSQCISDTQHTPVTQCI 261
Query: 403 CCRLPIWSSTSSTFPVWICTSVCSID*KRT 492
C I + + IC S C D + T
Sbjct: 262 CDSQYISDTQHTPITQCICDSQCISDTQHT 291
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 343 CWCCSNPASGSLHSPCSCCICCRLPIWSSTSSTFPVWICTSVCSID*KRT 492
C C S S + H+P + CIC I + + IC S C D + T
Sbjct: 206 CICDSQCISDTQHTPVTQCICDSQCISDTQHTPITQCICDSQCISDTQHT 255
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 343 CWCCSNPASGSLHSPCSCCICCRLPIWSSTSSTFPVWICTSVCSID*KRT 492
C C S S + H+P + CIC I + + IC S C D + T
Sbjct: 170 CICDSQCISDTQHTPVTQCICDSQYISDTQHTPVTQCICDSQCISDTQHT 219
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 343 CWCCSNPASGSLHSPCSCCICCRLPIWSSTSSTFPVWICTSVCSID*KRT 492
C C S S + H+P + CIC I + + IC S C D + T
Sbjct: 188 CICDSQYISDTQHTPVTQCICDSQCISDTQHTPVTQCICDSQCISDTQHT 237
>SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45)
Length = 1091
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -1
Query: 437 LEVLDHMGSRQHMQQEQGECREPLAGLEQHQ--HSMAKQHRMPLLGQQ 300
+ L H G ++H + G+C L++H H+ K+H P G++
Sbjct: 153 MHALTHTGEKEHQCLQCGKCFALAGTLKRHALIHTEEKEHHCPQCGKR 200
>SB_13393| Best HMM Match : Keratin_B2 (HMM E-Value=0.19)
Length = 163
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +1
Query: 223 CCN-SICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILC 345
CC+ ++CC + T CC + CC +LCC LC
Sbjct: 107 CCDLTLCCDLTSCCDLTLCCDM---SLCCDL--LLCCDLTLC 143
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +1
Query: 202 LRSCRSPCC-NSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNP 363
L +CR N IC + RC S++C + +G+ CC + C+ P
Sbjct: 3203 LETCREKATDNRICPKVTPPDRCPSGASDQCASDSDCQTGLKCCSSGCILTCTQP 3257
>SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1)
Length = 530
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +1
Query: 247 YSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCW 348
+S L C C + C SC P+ CC CW
Sbjct: 437 FSVPLTCPVGCPSMCAPSCTPA----CCAEQQCW 466
>SB_16934| Best HMM Match : Ldl_recept_b (HMM E-Value=1.7e-39)
Length = 407
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -2
Query: 427 WTIWVAGSICSRSRESVGSRWQDWSSTSIVWRSSIGCRYWGSKRCRTYWS 278
WT W + +R+R S GS + ST +VW + + Y K YW+
Sbjct: 194 WTEWGQDARITRARLSDGSGKEVLVSTGLVWPNGLAMDYVDKK---IYWA 240
>SB_28123| Best HMM Match : zf-NF-X1 (HMM E-Value=0.24)
Length = 453
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Frame = +1
Query: 205 RSCRSPCCNSICCSYSCTLRCT-FC--CSNRCGTSCCPSSGILCCFAILCWCCSNPASGS 375
+ C+S C ++ C + C CT C C C C S C C C+ P +
Sbjct: 24 QQCKSKCDRTLFCGHICQEPCTKNCPPCKEGCQNKCTHSECKKKC-GEPCVPCAEPCAWK 82
Query: 376 L-HSPCS--CCICCRLP 417
H CS C C P
Sbjct: 83 CRHYKCSKLCGEICDRP 99
>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/70 (25%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Frame = +1
Query: 199 GLRSCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGI-LCCFAILCWCCSNPASGS 375
G+ R C ++ C+ CT C CSN C C F C S
Sbjct: 145 GVGCKRMQCASAESCNQDCTRGCQLDCSNENTADCTQECKTGSCSFNCAAQTCE---SSC 201
Query: 376 LHSPCSCCIC 405
H C C
Sbjct: 202 AHGSCPNMTC 211
Score = 28.3 bits (60), Expect = 4.1
Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 4/101 (3%)
Frame = +1
Query: 190 SSTGLRSCRSPCCNSICC-SYSCTLRCTFCCSN-RC--GTSCCPSSGILCCFAILCWCCS 357
+ST + C S C + C S++C CT C+N C T C C C +
Sbjct: 79 ASTCNQRCLSGGCTDVACNSHTCLQTCTSNCTNMECHSNTKCTQE-----CEDGACGLAT 133
Query: 358 NPASGSLHSPCSCCICCRLPIWSSTSSTFPVWICTSVCSID 480
+ SG C C R+ S+ S CT C +D
Sbjct: 134 S-GSGKAEQICRGVGCKRMQCASAESCNQD---CTRGCQLD 170
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = +1
Query: 211 CRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSG 318
C+S C C C ++C + C +C S+G
Sbjct: 267 CKSRWCGVTCTGSGCDVKCPNNGTESCDQTCQKSAG 302
>SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Frame = +1
Query: 124 TSEHSSIRCTS*YRQQGIESFDSSTGLRSCRSPCCNSICCSYSCTLRCTFC----CSNRC 291
TSE + R+ +E FD T + PC N C +CT C CS +C
Sbjct: 108 TSEEWELPSQPTLRKLTVEEFDRITAEAENKMPCTN---CGKLGGKKCTACKIPYCSRKC 164
Query: 292 GTSCCPSSGILCCFAI 339
P C + I
Sbjct: 165 QQQHWPQHKTTCTWKI 180
>SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1678
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 253 SYRSSKWSCNRGYGRSEGRCCYQRTQC 173
+Y S K SC RGY ++ C +C
Sbjct: 805 TYGSYKCSCKRGYAHNDSNVCVDVNEC 831
>SB_41973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2504
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -1
Query: 431 VLDHMGSRQHMQQEQGECREPLAGLEQH--QHSMAKQHRMPLLGQ 303
VL H G + H + G+C L+ H H+ K+H+ P G+
Sbjct: 2348 VLTHTGEKGHQCLQCGKCFAQARHLKTHALTHTRKKEHQCPQCGK 2392
>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 301 CCPSSGILCCFAILCWCCSNPASGSLHSPCSCCI 402
CC + GI + + CS+P S + P SCCI
Sbjct: 138 CCGAKGINDWDKNIYFNCSSPGSEACGVPYSCCI 171
>SB_21208| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -2
Query: 283 WSSKRCSVGCSYRSSKWSCNRGYGRSE-GRCCYQRTQCPAGDIN 155
W +K+ V S S K C G +S RCC++ QCP G ++
Sbjct: 397 WKTKKNVVPTSECSKK--CPAGTRQSFINRCCWECFQCPEGTVS 438
>SB_16878| Best HMM Match : Keratin_B2 (HMM E-Value=0.19)
Length = 413
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -2
Query: 262 VGCSYRSSKWSCNRGYGRSEGRCCYQRTQCPAGDINLCSV 143
V Y SS +SCN G GR+ C T P D CS+
Sbjct: 21 VRAEYCSSDFSCNYGSGRNRICCNNHCTYSPTCDGYSCSM 60
>SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1444
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -1
Query: 416 GSRQHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQQE 297
G +Q+E E ++ + ++Q QH ++ + LL QQE
Sbjct: 368 GDEVRLQREMLEQQQKIIKMQQQQHQQHEEQQQRLLKQQE 407
>SB_59233| Best HMM Match : Involucrin (HMM E-Value=2.5)
Length = 138
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -1
Query: 416 GSRQHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQQE 297
G +Q+E E ++ + ++Q QH ++ + LL QQE
Sbjct: 89 GDEVRLQREMLEQQQKIIKMQQQQHQQHEEQQQRLLKQQE 128
>SB_38826| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 505
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -1
Query: 428 LDHMGSRQHMQQEQGECREPLAGLEQH--QHSMAKQHRMPLLGQ 303
L H G + H + G+C + L+ H H+ K HR P G+
Sbjct: 347 LTHTGEKPHQCPQCGKCFALASSLKTHALTHTGEKPHRCPQCGK 390
>SB_54394| Best HMM Match : Keratin_B2 (HMM E-Value=1.1)
Length = 245
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 406 CRLPIWSSTSSTFPVWICTSVC 471
C LP +S++SS+ P + T VC
Sbjct: 21 CALPCFSNSSSSLPCYAATEVC 42
>SB_44426| Best HMM Match : Lectin_legB (HMM E-Value=4.8)
Length = 439
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 379 HSPCSCCICCRLPIWSSTSST 441
+S CCI P+WSS+ ST
Sbjct: 97 YSELPCCISSSTPVWSSSRST 117
>SB_17447| Best HMM Match : zf-B_box (HMM E-Value=0.04)
Length = 1223
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +1
Query: 166 QQGIESFDSSTGLRSCRSPCCNSICCSYSCTLRCTFCCSNRCGTSC 303
++G E+ ++T S +P C+ C C CC+ C SC
Sbjct: 243 KKGNENMSTTTSTSSSLNPKCHEYCHGTPAVCYCPQCCAVFC-ESC 287
>SB_17959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 843
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +1
Query: 220 PCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSL 378
P C C C L + C G+S C LCC + C C N A+ S+
Sbjct: 587 PACGDDCDCDRCELTISGCPGQTKGSSVCS----LCCMS-ECECEENSAAPSV 634
>SB_12737| Best HMM Match : C_tripleX (HMM E-Value=0.027)
Length = 442
Score = 27.5 bits (58), Expect = 7.1
Identities = 22/88 (25%), Positives = 29/88 (32%), Gaps = 12/88 (13%)
Frame = +1
Query: 211 CRSPCCNSICCSYSCTLRC------TFCCSNRCGTSCCPSSGILC---CFAILCWCCSNP 363
C S CN C C + C C S+ C + CP++ +C C C
Sbjct: 96 CSSRMCNQTCIRAGCKMECYGDECHQTCQSSGCDVT-CPAASKVCVQVCITGRCTMRCGR 154
Query: 364 ASGSLHSPC---SCCICCRLPIWSSTSS 438
G C C + C ST S
Sbjct: 155 GVGRCEQKCLAGKCAMICEARECVSTCS 182
>SB_59375| Best HMM Match : TPR_2 (HMM E-Value=7.3e-06)
Length = 383
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 166 QQGIESFDSSTGLRSCRSPCCNSICCSYSCTL 261
+ G+E D S RSP C I +Y C +
Sbjct: 22 ESGLEHLDKGCRADSLRSPMCAMILLAYHCVI 53
>SB_41325| Best HMM Match : SWIM (HMM E-Value=0.015)
Length = 950
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +1
Query: 274 CCSNRCGTSCCPSSGILCCFAILCWCCSNPAS 369
CC+ C LCC + L C PA+
Sbjct: 717 CCARALALQCASREPQLCCLSALTLCEKEPAA 748
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 6/69 (8%)
Frame = +1
Query: 208 SCRSPCCNSICCSYSCTLR---CTFCCSNRCGTSC---CPSSGILCCFAILCWCCSNPAS 369
+C PC C + SC C C + G +C CP+ + C C +N
Sbjct: 625 NCTLPCA---CVNGSCNATDGSCN-CAAGYHGNACDRPCPAGKHGANCGLKCLCANNGTC 680
Query: 370 GSLHSPCSC 396
++ CSC
Sbjct: 681 NAITGRCSC 689
>SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1387
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = +1
Query: 250 SCTLRCTFCCSNRCGTSCCP-SSGILC 327
SC +C C C + CC + G LC
Sbjct: 1219 SCPAKCASQCDKSCPSECCSRAKGALC 1245
>SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 462
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +1
Query: 217 SPCCNSICCSYSCTLRCTFCCSNRCGTSC-CPS--SGILC 327
SPC SIC + + TF ++R G +C CP +GILC
Sbjct: 283 SPCGTSICMNGGTCVDNTF-TNSRYGFACVCPRGYTGILC 321
>SB_52148| Best HMM Match : EGF (HMM E-Value=0)
Length = 1055
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 217 SPCCNSICCSYSCTLRCTFCCSNRCGTSC 303
+PC N +C S S T C C GT C
Sbjct: 964 NPCLNGVCVSTSSTYTCR-CTVGFKGTRC 991
>SB_44587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 876
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -2
Query: 319 CRYWGSKRCRTYWSSKRCSVGCSYRSSKWSC 227
C G+K C W CS C S++ SC
Sbjct: 285 CDSHGNKTCHPGWYGDSCSKKCEDASTELSC 315
>SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 3312
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = -2
Query: 304 SKRCR-TYWSSKRCSVGC--SYRSSKWSCNRGYGRSEGRCCYQRTQCPAGDINLC 149
S RCR S C+ C + S + +C +GY G C +C + N C
Sbjct: 348 SPRCRCANQKSASCNATCINTLGSYRCTCAKGYSLIGGTVCQDIDECLSTSTNKC 402
>SB_33054| Best HMM Match : DEAD (HMM E-Value=0.42)
Length = 1088
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +1
Query: 175 IESFDSSTGLRSCRSPCCNSICC-SYSCTLRCTF 273
+ES + GLR SP CC S C L F
Sbjct: 551 VESVEQRKGLRQANSPAYRHTCCLSRGCDLAVRF 584
>SB_29302| Best HMM Match : LRR_1 (HMM E-Value=1.1e-11)
Length = 606
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 223 CCNSICCSYSCTLRCTFCCSNRCGTSCCPS 312
CC I Y C C FC + CG C P+
Sbjct: 503 CCGVITGCYFCCCCCFFCFNFCCG-KCKPN 531
>SB_6056| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-14)
Length = 270
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +1
Query: 277 CSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPCSCC 399
C+ R PS L C I C P + L +PC CC
Sbjct: 137 CNTRSTGKASPS---LSCEVICRICHGGPTTEMLIAPCRCC 174
>SB_59679| Best HMM Match : Lectin_C (HMM E-Value=5.3e-10)
Length = 849
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 250 SCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPCS 393
S L C C++ C T+C P+ CCF + + G+ SPC+
Sbjct: 275 STELICPTVCASTCTTACSPT----CCFQTPSYTPYSACYGA--SPCA 316
>SB_41995| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 785
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -2
Query: 229 CNRGYGRSEGR-CCYQRTQCPAGDIN 155
C GY ++ + CC++ T+CP G I+
Sbjct: 530 CPPGYWQTRMKNCCWECTECPQGTIS 555
>SB_35930| Best HMM Match : SNF2_N (HMM E-Value=1.3004e-42)
Length = 784
Score = 27.1 bits (57), Expect = 9.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2
Query: 247 RSSKWSCNRGYGRSEGRCCY 188
R + C+ G G++ G+CCY
Sbjct: 402 RKKDYPCDCGSGQNRGKCCY 421
>SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6)
Length = 1053
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = -2
Query: 400 CSRSRESVGSRWQDWSSTSIVWRSSIGCRYWGSKRCRTYWSSKRCSVGCSYRSSKWSCNR 221
C+R+R RW+D + ++W S ++R T W S R V S S R
Sbjct: 966 CARNRRCASQRWKDSAKAWLLWCPS------SARRTSTPW-SVRSFVVAPLNSVPSSTMR 1018
Query: 220 GYGRSEGRCCY 188
G G Y
Sbjct: 1019 TLGHVRGPSAY 1029
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -1
Query: 422 HMGSRQHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQQE 297
H QH QQ+Q + ++ +Q Q +Q + L QQ+
Sbjct: 311 HQHQHQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLQQQQQ 352
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,221,888
Number of Sequences: 59808
Number of extensions: 270141
Number of successful extensions: 1578
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1478
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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