Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309H01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   5.0  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   5.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.7  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -3

Query: 498 QSVVNSFMFGKSIFSK*SI*LHNKAFVK 415
           Q+ +NS++F  S+     +  H+KA ++
Sbjct: 40  QNYINSYLFSLSLAQNNQLFTHHKAPIR 67


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 73  NRIFGIRLLSVHIF 32
           NRIFG  +L  HIF
Sbjct: 152 NRIFGWNILFGHIF 165


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 417 KQNV*NCKGITCLALHVLNRP 355
           + +V NC+   C   HV+N P
Sbjct: 492 ESSVSNCENEYCECTHVVNIP 512


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,273
Number of Sequences: 336
Number of extensions: 2412
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)