Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309H01f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73969-13|CAE17698.1|   73|Caenorhabditis elegans Hypothetical p...    28   4.7  
Z73969-10|CAE17695.1|   73|Caenorhabditis elegans Hypothetical p...    28   4.7  
Z50797-7|CAD27609.1|  195|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin...    27   6.2  
AB086410-1|BAC44993.1|  195|Caenorhabditis elegans ABF-6 protein.      27   6.2  
Z73969-17|CAI79127.1|  111|Caenorhabditis elegans Hypothetical p...    27   8.1  
AF099920-2|AAL32226.2|  437|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z73969-13|CAE17698.1|   73|Caenorhabditis elegans Hypothetical
           protein C12D8.17 protein.
          Length = 73

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 10  GYGFSASQIYGQTGGGSQIYGYTGE 84
           GYG+ A + YG  G GS   GY G+
Sbjct: 39  GYGYGAYRAYGGYGLGSAYAGYYGK 63


>Z73969-10|CAE17695.1|   73|Caenorhabditis elegans Hypothetical
           protein C12D8.14 protein.
          Length = 73

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 10  GYGFSASQIYGQTGGGSQIYGYTGE 84
           GYG+ A+  YG  G GS   GY G+
Sbjct: 39  GYGYGANGAYGGYGLGSAYAGYYGK 63


>Z50797-7|CAD27609.1|  195|Caenorhabditis elegans Hypothetical
           protein T22H6.7 protein.
          Length = 195

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 4   NNGYGFSASQIYGQTGGGSQIYGYTGEYPRAHYPRRRSDYDSN 132
           NNGY    +  Y    G +   GY G+ P   Y    S+++SN
Sbjct: 111 NNGYNNGNNMRYNDNNGYNTNNGYRGQ-PTPGYGNSNSNFNSN 152


>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
           protein protein16, isoform d protein.
          Length = 1030

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 62  WDPPPVCPYIWEAL 21
           W PPP  PY+W  L
Sbjct: 586 WQPPPERPYVWPTL 599


>AB086410-1|BAC44993.1|  195|Caenorhabditis elegans ABF-6 protein.
          Length = 195

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 4   NNGYGFSASQIYGQTGGGSQIYGYTGEYPRAHYPRRRSDYDSN 132
           NNGY    +  Y    G +   GY G+ P   Y    S+++SN
Sbjct: 111 NNGYNNGNNMRYNDNNGYNTNNGYRGQ-PTPGYGNSNSNFNSN 152


>Z73969-17|CAI79127.1|  111|Caenorhabditis elegans Hypothetical
           protein C12D8.18 protein.
          Length = 111

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 10  GYGFSASQIYGQTGGGSQIYGYTGE 84
           GYG+ A   YG  G GS   GY G+
Sbjct: 77  GYGYGAYGAYGGYGFGSAYAGYYGK 101


>AF099920-2|AAL32226.2|  437|Caenorhabditis elegans Hypothetical
           protein H06H21.6 protein.
          Length = 437

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 244 LYSVN*NRSKRTRIKTLRVYCQSFVK 167
           LYS+N    K T I+T+  YCQ+ ++
Sbjct: 169 LYSLNKKHPKETAIETICKYCQNILE 194


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,957,796
Number of Sequences: 27780
Number of extensions: 198289
Number of successful extensions: 428
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)