Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309G12f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces pombe... 64 9e-12
SPBP4H10.19c |||calreticulin/calnexin homolog|Schizosaccharomyce... 37 0.002
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 36 0.004
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 28 0.73
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.2
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 26 3.0
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 26 3.0
SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces p... 26 3.9
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 26 3.9
SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr 3||... 25 5.2
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 25 5.2
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 25 5.2
SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr 1|||M... 25 6.8
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 6.8
SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces ... 25 6.8
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 6.8
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 25 9.0
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 25 9.0
SPCC4F11.03c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 9.0
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 25 9.0
>SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 560
Score = 64.5 bits (150), Expect = 9e-12
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +3
Query: 192 DKGLKTSEDARFYALSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKD 368
+ GL ++A +A+S +F +P + K LVVQ+ V E+ ++CGG YLK+ + +
Sbjct: 89 EAGLVMKDEAAHHAISYEFDEPINEPEKDLVVQYEVNPEEGLNCGGAYLKLL-AEPTHGE 147
Query: 369 MHGETPYEIMFGPDICGPGTKKVHVIFSY 455
M Y IMFGPD CG +VH IF +
Sbjct: 148 MSNSIDYRIMFGPDKCGV-NDRVHFIFKH 175
>SPBP4H10.19c |||calreticulin/calnexin homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 37.1 bits (82), Expect = 0.002
Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 6/137 (4%)
Frame = +3
Query: 72 FEEKFPDD---SWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL-S 239
F E+F + +W S W K+ G + L S D+ GL T + + + L S
Sbjct: 33 FSEQFTSEDITTWRSRW--RAPVNKDLGVWDLVEAPG-SHLRDEYGLITLKSNKPHILIS 89
Query: 240 RKFKPFSNEGK--PLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDI 413
P + + P+V+ F VK + CG Y+ + + K++ E P I FG
Sbjct: 90 NLENPTTRQSSSVPIVLSFQVKPTKPWTCGHAYVSLVH-QSNPKNVSKEPPSVIRFGVKK 148
Query: 414 CGPGTKKVHVIFSYXGK 464
CG I SY GK
Sbjct: 149 CGMFDYISLSIISYDGK 165
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 35.9 bits (79), Expect = 0.004
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = -2
Query: 226 NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHE-SSGNFSSKNTSQFIE 50
N SSE F S+S SL P VN + S + ++ L S + S+ NF+S ++S +
Sbjct: 475 NYTSSEAF---STSSSLVVIPPVNSSLVTSSTSFTKFSSLSSSQLSTENFTSASSSLSLT 531
Query: 49 DNASKLTTTSTT 14
+ S L+T STT
Sbjct: 532 NAKSSLSTPSTT 543
>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 28.3 bits (60), Expect = 0.73
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 157 NLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTT 26
N N F + + S +SGNFS T Q DN S +T
Sbjct: 575 NSNSQRPFSTVPSESNVFSRNASGNFSMSQTHQPTTDNTSSFST 618
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 2.2
Identities = 33/137 (24%), Positives = 59/137 (43%)
Frame = -2
Query: 418 PQMSGPNIISYGVSPCMSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGLPSLLNGLNLR 239
P S I S SP S SS S + S S + + + T+ + + + R
Sbjct: 336 PTSSSSTISSSSSSPSSSSFSSTTSSS---KSSSSFSSTVSSSSSTSSSTLTSSSSSSSR 392
Query: 238 ERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQ 59
+ + SS + SSS S + V+ F ++ S ++ SH SS + SS ++
Sbjct: 393 PASSSSHSSSLSSHKSSSSSKSSSAPVSSAFYHN----STSSRSSSHSSSHSLSSLSSKP 448
Query: 58 FIEDNASKLTTTSTTAF 8
+ ++S L T+S+ +
Sbjct: 449 ILTASSSSLLTSSSHTY 465
>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
Thi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 226 NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFP 131
N +E F+P + SL N P +N ++ ++ P
Sbjct: 685 NSTPNEAFQPFDQTSSLYNVPGLNKSYVSNQP 716
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 26.2 bits (55), Expect = 3.0
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +3
Query: 78 EKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDA 221
+ F +D + +W EH K ++ + + FS+ DD+ + SE +
Sbjct: 49 QAFQEDEGDEDWEEEEHKPKAKRRYNTRSNESFSE-GDDEPFEVSESS 95
>SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1040
Score = 25.8 bits (54), Expect = 3.9
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -2
Query: 250 LNLRERA*NLASSEV----FKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESS 89
++LR RA L+ E+ + LS+ LK +++ FP SFP +Y + ++SS
Sbjct: 121 VDLRMRAIFLSIDEISMICIRILSAEERLKTGRSIDSGFPFSFPVHLIYDMCILNDSS 178
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.8 bits (54), Expect = 3.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 75 EEKFPDDSWESNWVYS 122
EEKFPD +W +W S
Sbjct: 251 EEKFPDIAWRVSWSLS 266
>SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1315
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -3
Query: 120 CTPNCFPTNHQETSPQRIHHNLSKIMPAS*Q 28
C P FP N+QE H+ I AS Q
Sbjct: 791 CKPESFPANYQEVLDYYTHNGFRVIACASKQ 821
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 25.4 bits (53), Expect = 5.2
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = +3
Query: 204 KTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHG 377
KT Y +SRK P L + F K DC G L+V D L+ +G
Sbjct: 952 KTIPRDLLYEVSRKINPLHQASTRLAIAFPDKRLLQYDC--GKLQVLDRLLKDLVSNG 1007
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 162 AGKFFSDPEDDKGLKTSEDARFYALSRKFKPFSNE 266
A F S E KGL +SE Y+L P SN+
Sbjct: 263 ADSFLSHSESIKGLSSSEQGTVYSLKASHDP-SNQ 296
>SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 757
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +3
Query: 147 KFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKFKPFSNEGKPLVVQ 287
K LT +S+ D G+ FY + P S +PLVV+
Sbjct: 578 KTNLTRSLSYSEQSFDSGVSILSCQNFYNIFHPTDPISYRVEPLVVK 624
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.0 bits (52), Expect = 6.8
Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Frame = -2
Query: 358 SSLQSKTLRYPPPQSMSCSCLTVNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSG- 182
+SL S P S S + T ++ +PS + + A ++SS PLSSS
Sbjct: 12 TSLSSSASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSSSF 71
Query: 181 -SLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTAFI 5
S + + +S S + L+ SS +S +++ ++S ++S+++ +
Sbjct: 72 TSPASSSFITSLVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLV 131
>SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 25.0 bits (52), Expect = 6.8
Identities = 16/63 (25%), Positives = 34/63 (53%)
Frame = +3
Query: 177 SDPEDDKGLKTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKL 356
++ ED++GL SED + +A + F +S+ + L + +++ + L+ F+ +L
Sbjct: 236 NESEDEEGLSLSEDGKKFA-NIDFGDYSSSEEFLKEHLNILADEE-ESDAILLEAFNAEL 293
Query: 357 EQK 365
E K
Sbjct: 294 EGK 296
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.0 bits (52), Expect = 6.8
Identities = 29/137 (21%), Positives = 56/137 (40%), Gaps = 1/137 (0%)
Frame = -2
Query: 427 VPGPQMSGPNIISYGVSPCMSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGLPSLLNGL 248
+P S P+ S SP S SS S S S + ++ ++ +PS + +
Sbjct: 518 IPSTSSSTPSS-SIISSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSV 576
Query: 247 NLRERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPNSF-PGCSLYTQLLSHESSGNFSSK 71
+ + + S +SSS + F + + + P+S S + +LS + S
Sbjct: 577 SSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSSTILSSPTPSTSSLM 636
Query: 70 NTSQFIEDNASKLTTTS 20
+S I +S + ++S
Sbjct: 637 ISSSSIISGSSSILSSS 653
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -1
Query: 374 VHVLLLQFAVKDLEVSASTVNVLFMFDSELDYQGFTLITERFELTGESIEPRIFR 210
V++ LL L ++ T + + +FDS+ + +R G++ E RI+R
Sbjct: 805 VNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYR 859
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 272 FTLITERFELTGESIEPRIFRGFQT 198
F E FELTG + IF+ FQ+
Sbjct: 77 FMSFLENFELTGRPVVGTIFKYFQS 101
>SPCC4F11.03c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 335
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -2
Query: 145 PNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNAS 38
PN P ++ Q ++ ++S F N S ++ DN S
Sbjct: 169 PNMPPKTTVNDQDVTKDASQQFGGSNFSNYLRDNDS 204
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 24.6 bits (51), Expect = 9.0
Identities = 20/100 (20%), Positives = 47/100 (47%)
Frame = -2
Query: 310 SCSCLTVNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFP 131
+CS T++ ++ ++ ++ +S + SSS + P+ + + +S P
Sbjct: 110 ACSTCTISTSSLSYSGTISSTSIAPSMIGTRTSSSYFITSSSST----PSSSSSSSSSSP 165
Query: 130 GCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 11
S S +SS + SS + S ++SK +++S+++
Sbjct: 166 SSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSS 205
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,293,514
Number of Sequences: 5004
Number of extensions: 49541
Number of successful extensions: 170
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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