Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309G12f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 188 2e-48
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 181 3e-46
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 180 8e-46
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 175 2e-44
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 84 8e-17
03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026 36 0.026
06_03_1514 + 30696632-30696724,30696857-30697009,30697226-306973... 29 2.3
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 4.0
09_02_0286 - 6898041-6898144,6898881-6899005,6899158-6899207,689... 28 4.0
05_01_0421 + 3308692-3309070,3309199-3309339,3309776-3309897,331... 28 5.2
04_03_0741 + 19187333-19188868,19189264-19189490,19189578-191898... 28 5.2
12_02_1159 + 26585042-26585441,26585520-26585608,26585670-265857... 27 6.9
08_01_0355 - 3122374-3122520,3122912-3123047,3123124-3123221,312... 27 6.9
03_02_0389 - 8036575-8036841,8037011-8037133,8037516-8037736,803... 27 6.9
04_03_0118 - 11474060-11475298 27 9.1
02_05_0276 + 27378994-27380094,27380185-27380250,27380586-273806... 27 9.1
01_04_0010 - 15058175-15058195,15058320-15058430,15059031-150592... 27 9.1
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 188 bits (458), Expect = 2e-48
Identities = 88/155 (56%), Positives = 114/155 (73%), Gaps = 2/155 (1%)
Frame = +3
Query: 63 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 236
+VFF+EKF +D WES WV SE E G++ T+GK+ DPED KG++TSED RFYA+
Sbjct: 30 EVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPED-KGIQTSEDYRFYAI 87
Query: 237 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDIC 416
S ++ FSN+ K LV+QF+VKHEQ +DCGGGY+K+ ++QK G+TPY IMFGPDIC
Sbjct: 88 SAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDIC 147
Query: 417 GPGTKKVHVIFSYXGKNHLIKKDIRCKDDVYTHLY 521
G TKKVH IF+ KNHLIKKD+ C+ D +H+Y
Sbjct: 148 GYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVY 182
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 181 bits (441), Expect = 3e-46
Identities = 82/155 (52%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
Frame = +3
Query: 63 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 236
+V FEE+F +D WES WV S+ E G FK TAG++ DP DDKG++T+ DAR +A+
Sbjct: 28 EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDP-DDKGIQTTLDARHFAI 85
Query: 237 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDIC 416
S K FSN+G+ LV+Q+++K EQDI+CGGGY+K+ + QK G+TPY +MFGPDIC
Sbjct: 86 SAKIPEFSNKGRTLVLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGDTPYSLMFGPDIC 145
Query: 417 GPGTKKVHVIFSYXGKNHLIKKDIRCKDDVYTHLY 521
G TKK+H+I SY G+N+ IKKD++C+ D TH+Y
Sbjct: 146 GTQTKKLHLILSYQGQNYPIKKDLQCETDKLTHVY 180
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 180 bits (437), Expect = 8e-46
Identities = 87/165 (52%), Positives = 111/165 (67%), Gaps = 12/165 (7%)
Frame = +3
Query: 63 DVFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDD----------KGLK 206
+VFF+EKF DD WE WV SE G++ T+GK++ D +D G++
Sbjct: 26 EVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGMCEVTLLLCAGIQ 84
Query: 207 TSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETP 386
TSED RFYA+S K+ FS++ K LV+QF+VKHEQ +DCGGGY+K+ ++QK GETP
Sbjct: 85 TSEDYRFYAISAKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETP 144
Query: 387 YEIMFGPDICGPGTKKVHVIFSYXGKNHLIKKDIRCKDDVYTHLY 521
Y IMFGPDICG TKKVH I + GKNHLIKKD+ CK D TH+Y
Sbjct: 145 YSIMFGPDICGYATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVY 189
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 175 bits (426), Expect = 2e-44
Identities = 80/158 (50%), Positives = 110/158 (69%), Gaps = 2/158 (1%)
Frame = +3
Query: 54 INCDVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARF 227
++ +V FEE+F DD W S WV S+ E G FK TAG + DP DD+G++T+ DA+
Sbjct: 25 VSGEVIFEERF-DDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDP-DDRGIQTTSDAKH 82
Query: 228 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGP 407
+A+S KF FSN+ + LVVQ+++K EQDI+CGG Y+K+ + QK G+TPY MFGP
Sbjct: 83 FAISAKFPEFSNKNRTLVVQYSIKIEQDIECGGAYIKLMSGYVNQKKFGGDTPYSFMFGP 142
Query: 408 DICGPGTKKVHVIFSYXGKNHLIKKDIRCKDDVYTHLY 521
DICG TKK+H+I SY G+N+ IKKD++C+ D TH Y
Sbjct: 143 DICGDQTKKLHLILSYQGQNYPIKKDLKCETDKLTHFY 180
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 83.8 bits (198), Expect = 8e-17
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
Frame = +3
Query: 63 DVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSR 242
D F E F D+S+E WV S GK+ K K SD +D GL SE A+ YA+ +
Sbjct: 24 DPLFYEPF-DESFEGRWVLS---GKDDYKGVWKHEK--SDGHEDYGLLVSEKAKKYAIIK 77
Query: 243 KF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPD 410
+ +P + + +V+QF V+ + ++CGG YLK D + K+ ETPY IMFGPD
Sbjct: 78 ELDEPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYTIMFGPD 137
Query: 411 ICGPGTKKVHVIFSY 455
CG T KVH I +
Sbjct: 138 KCG-STNKVHFILKH 151
>03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026
Length = 585
Score = 35.5 bits (78), Expect = 0.026
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 459 GKNHLIKKDIRCKDDVYTHLY 521
G NHLIKKD+ C+ D TH+Y
Sbjct: 515 GNNHLIKKDVPCETDQLTHVY 535
>06_03_1514 +
30696632-30696724,30696857-30697009,30697226-30697309,
30697451-30697569,30697769-30697870,30699071-30699190,
30699285-30699350,30699563-30699629,30699720-30699773,
30700379-30700534,30701130-30701228
Length = 370
Score = 29.1 bits (62), Expect = 2.3
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Frame = -1
Query: 476 DEMVLTLVTEDYVYLLGSRTTNVRAEHNLIWS-LSVHVLLLQ-----FAVKDLEVSASTV 315
D M + ++Y +L NV HNL WS ++H+L FA + L +
Sbjct: 105 DIMARKFLNQNYTVMLFHYDGNVDGWHNLEWSDKAIHILARNQTKWWFAKRFLHPDVVAI 164
Query: 314 -NVLFMFDSELDYQGF-------TLITERFELTGESIEP 222
+F++D +L F +++E E+T +++P
Sbjct: 165 YGFIFLWDEDLGVDNFDPRRYLDIMVSEGLEITQPALDP 203
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -2
Query: 412 MSGPNIISYGVSPCMSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGL 269
M GP ++ ++P S +Q + +++ +SC+CL T+KGL
Sbjct: 674 MLGPTVLV--LAPTRELASQIQDEAVKFGRSSRVSCTCL-YGGTSKGL 718
>09_02_0286 -
6898041-6898144,6898881-6899005,6899158-6899207,
6899245-6899386,6899951-6900020,6900077-6900216,
6900291-6900365,6901083-6904723
Length = 1448
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -2
Query: 319 QSMSCSCLTVNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPN 140
+S+ L+ N + G+P L GLN +++++ + P+ SSG L FP + N
Sbjct: 738 KSIGALDLSNNQLSGGIPPGLGGLNFLADF-DVSNNNLTGPIPSSGQLTTFPPSRYDNNN 796
Query: 139 SFPGCSL 119
G L
Sbjct: 797 GLCGIPL 803
>05_01_0421 +
3308692-3309070,3309199-3309339,3309776-3309897,
3310369-3310632,3310719-3310849,3311254-3311461,
3311564-3311632,3311722-3311799,3312448-3312621
Length = 521
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2
Query: 97 ESSGNFSSKNTSQFIEDNASKLTTTSTTA 11
ES+G SSK + E++ + TTTSTTA
Sbjct: 59 ESAGVSSSKKKRRIEEESPAATTTTSTTA 87
>04_03_0741 +
19187333-19188868,19189264-19189490,19189578-19189899,
19190311-19190399,19190882-19191128,19191756-19191884,
19191967-19192182,19192256-19192379,19192857-19193095
Length = 1042
Score = 27.9 bits (59), Expect = 5.2
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Frame = -1
Query: 431 LGSRTTNVRAEHNLIWSLSVHVL---LLQFAVKDLEV--SASTVNVLFMFDSEL-DY-QG 273
LGS T N+ A+H+ S H+ L +FAV E+ S N L +++++ D+ G
Sbjct: 701 LGSSTANLSADHDTSNLSSPHIAASSLSEFAVLGFELGYSMENPNSLVLWEAQFGDFSNG 760
Query: 272 FTLITERFELTGES 231
+I ++F +GE+
Sbjct: 761 AQVIFDQFLSSGEA 774
>12_02_1159 +
26585042-26585441,26585520-26585608,26585670-26585720,
26586189-26586282,26586451-26586512,26586589-26586671,
26586793-26586901,26587010-26587051,26587152-26587316,
26588165-26588341,26588820-26588984,26589069-26589332
Length = 566
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 411 ICGPGTKKVHVIFSYXGKNHLIKKDIRCKD 500
I GPG + I S+ N+LI +D+ KD
Sbjct: 330 IVGPGDELKEFILSFCTHNYLIVQDVELKD 359
>08_01_0355 -
3122374-3122520,3122912-3123047,3123124-3123221,
3123724-3123801,3123876-3123945,3124452-3124516,
3124606-3124686,3124822-3124926,3125002-3125085,
3125175-3125250,3125358-3125436,3125526-3125646,
3125768-3125827
Length = 399
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 144 GKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKFKPF--SNEGKPLVVQFTVKHEQDI 314
G+ + A DPE D+ LK EDA AL++K + N K ++ ++++QD+
Sbjct: 244 GRVRDWARTHSGDPEIDEALKKGEDAGL-ALAKKVYAYIHKNGYKTKLMAAAIRNKQDV 301
>03_02_0389 -
8036575-8036841,8037011-8037133,8037516-8037736,
8037788-8037812,8038344-8038445,8038556-8038951,
8039647-8039699,8039813-8039897,8040220-8040370,
8040457-8040464
Length = 476
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 156 LTAGKFFSDPEDDKGLKTSEDARFYALSRKFK-PFSNEGKPLVVQFTV 296
L AG + + GL S ARFYA+ R + S++ VQF+V
Sbjct: 12 LVAGGYLVLERPNAGLVLSTSARFYAIVRPLRDELSHDSWAWAVQFSV 59
>04_03_0118 - 11474060-11475298
Length = 412
Score = 27.1 bits (57), Expect = 9.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3
Query: 123 HCTPNCFPTNHQETSPQRIHH 61
HCTP+C+P H + + H
Sbjct: 313 HCTPSCYPDEHYIPTYLHLRH 333
>02_05_0276 +
27378994-27380094,27380185-27380250,27380586-27380660,
27381927-27382025,27382353-27382436,27382519-27382868,
27383190-27383406,27383579-27383658,27383760-27383850,
27386544-27386672,27388771-27388858,27389967-27390097
Length = 836
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/59 (28%), Positives = 23/59 (38%)
Frame = -2
Query: 283 TTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQL 107
TT G P + N + L EV S S ++KN P P G + Y Q+
Sbjct: 751 TTVGFPGRIRAPNPIVKKARLVKKEVEPIFSDSDAMKNAPKTTTTCPRCQNGEAYYRQM 809
>01_04_0010 -
15058175-15058195,15058320-15058430,15059031-15059246,
15059327-15059505,15059655-15059820,15059914-15059972,
15060065-15060107,15060285-15060354,15060458-15060547,
15060621-15060742,15060777-15060808,15060876-15061064,
15061148-15061241,15061325-15061412,15061498-15061718,
15061924-15061997,15062081-15062363,15062455-15062589,
15062721-15062942,15063029-15063208,15063305-15063402,
15063522-15063634,15064156-15064259,15064400-15064522,
15064857-15065192
Length = 1122
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = -1
Query: 368 VLLLQFAVKDLEVSASTVNVLFMFDSELDYQGFTLITERFELTGESIEPRIFR 210
V LL L ++ +T +V+ ++DS+ + Q +R G+ E ++FR
Sbjct: 603 VFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFR 655
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,915,312
Number of Sequences: 37544
Number of extensions: 327635
Number of successful extensions: 865
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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