Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309G07f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   1.5  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   2.0  
AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8...    23   8.2  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   8.2  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   8.2  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +1

Query: 13   LSEGEKKLSHNILAILEHYKQPDP 84
            LS GEK LS   L    HY +P P
Sbjct: 1187 LSGGEKTLSSLALVFALHYYKPSP 1210


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -3

Query: 288 VVAACLQFFESHHGVGLHCSDIGLNVI 208
           ++  C+ F + HH     CS++G+ +I
Sbjct: 437 LILMCISFLQQHHQKPNACSNLGVLLI 463


>AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8
           protein.
          Length = 700

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +1

Query: 184 YGTNEFRLNYVKADIGAMEAHAVMTLEKLQARGNYTFATW 303
           +G N    + V  D G      V+T++ L    + TFATW
Sbjct: 52  FGPNSPASSQVSNDTGVPPT--VVTIKDLDELPDLTFATW 89


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 363 RGPSSRARR*NQSGKHRHGLIGQQHRCEPG 452
           RGP S   R ++  + +     QQH+ +PG
Sbjct: 461 RGPDSGTDRHSEKQQQQQSQHQQQHQHQPG 490


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 363 RGPSSRARR*NQSGKHRHGLIGQQHRCEPG 452
           RGP S   R ++  + +     QQH+ +PG
Sbjct: 461 RGPDSGTDRHSEKQQQQQSQHQQQHQHQPG 490


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.135    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,716
Number of Sequences: 2352
Number of extensions: 11423
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)