Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309G07f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132860-6|CAB60526.1|  373|Caenorhabditis elegans Hypothetical ...    32   0.22 
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    29   2.0  
U80843-4|AAB37964.1|  470|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z99772-1|CAB16921.1|  794|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z75550-14|CAA99932.1|  794|Caenorhabditis elegans Hypothetical p...    28   4.7  
AC006722-3|AAK68421.3|  404|Caenorhabditis elegans Hypothetical ...    28   4.7  
AC006645-8|AAF39848.1|  452|Caenorhabditis elegans Hypothetical ...    28   4.7  
U40942-4|AAC47069.2|  486|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U40942-3|AAU05564.1|  487|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U23519-4|AAK31501.1|  358|Caenorhabditis elegans Toxin-regulated...    24   9.3  

>AL132860-6|CAB60526.1|  373|Caenorhabditis elegans Hypothetical
           protein Y56A3A.9 protein.
          Length = 373

 Score = 32.3 bits (70), Expect = 0.22
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
 Frame = +1

Query: 73  QPDPTGLPGAKLP--DPYPVPDVKQSLTLGTMNFKNIALYGTNEFRLNYVKAD-IGAMEA 243
           QP P  LPG + P   P P+P +     L  + ++ I +  TNE RL  +  D +  M  
Sbjct: 27  QPPPQDLPGLQDPPLTPLPLPPLLCPHPLSLLTWEGIQIPTTNECRLLGLHFDSMLCMRE 86

Query: 244 HAVMTLEKLQARGN 285
           H     ++LQ++ N
Sbjct: 87  HHAQIKKRLQSQLN 100


>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
            protein F39C12.1 protein.
          Length = 5105

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +1

Query: 10   KLSEGEKKLSHNILAILEHYKQPDPTGLPGAKLPDPYPVPDVK 138
            K S+GEKK+  N   + +    P P   P  + P+P P P V+
Sbjct: 2795 KNSKGEKKVKENTAPVQQ---APVPVSPPREETPEPTPSPPVR 2834


>U80843-4|AAB37964.1|  470|Caenorhabditis elegans Hypothetical
           protein C32B5.9 protein.
          Length = 470

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
 Frame = +1

Query: 199 FRLNYVKADIGAMEAHAVMTLEKLQARGNYTFATWFNSVRGPFTVHITGLRVTANAGLQV 378
           F L+     + + E    + L+ L+  GN   +   NS+R    V+  G R++    L V
Sbjct: 173 FHLSQQYPSLLSTERSVPLRLDSLKLGGN---SDSVNSIRCELAVYRHGGRLSKKFKLDV 229

Query: 379 ERDGKIRAENIVMDLSASNIAVNLE-NAEI 465
             DGK+   NIV+      I V+L  N EI
Sbjct: 230 TEDGKVDM-NIVVVEGLGEILVDLRGNREI 258


>Z99772-1|CAB16921.1|  794|Caenorhabditis elegans Hypothetical
           protein H05L14.1 protein.
          Length = 794

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = +1

Query: 16  SEGEKKLSHNILAILEHYKQPDPTGLPGAKLPDPYPVPD-VKQSLTLGTMN 165
           S  +K L+  +         P   G P A  P P PV D  K+  T+ TM+
Sbjct: 16  SNRKKNLTKELSREASRMGAPSQMGAPSAVTPIPVPVSDPTKKGTTMSTMS 66


>Z75550-14|CAA99932.1|  794|Caenorhabditis elegans Hypothetical
           protein H05L14.1 protein.
          Length = 794

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = +1

Query: 16  SEGEKKLSHNILAILEHYKQPDPTGLPGAKLPDPYPVPD-VKQSLTLGTMN 165
           S  +K L+  +         P   G P A  P P PV D  K+  T+ TM+
Sbjct: 16  SNRKKNLTKELSREASRMGAPSQMGAPSAVTPIPVPVSDPTKKGTTMSTMS 66


>AC006722-3|AAK68421.3|  404|Caenorhabditis elegans Hypothetical
           protein Y19D10A.8 protein.
          Length = 404

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 439 AVNLENAEIISGFINTIGPFIF 504
           ++ L N + ISGFI+ +G F+F
Sbjct: 100 SIGLRNTQTISGFISGLGSFLF 121


>AC006645-8|AAF39848.1|  452|Caenorhabditis elegans Hypothetical
           protein F56A4.10 protein.
          Length = 452

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 439 AVNLENAEIISGFINTIGPFIF 504
           ++ L N + ISGFI+ +G F+F
Sbjct: 64  SIGLRNTQTISGFISGLGSFLF 85


>U40942-4|AAC47069.2|  486|Caenorhabditis elegans Hypothetical
           protein K02E10.4a protein.
          Length = 486

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 291 GVVAACLQFFESHHGVGLHCSDIGLNVI 208
           G+   C Q   S  G  +HC+D+GL  I
Sbjct: 163 GLPMKCSQIARSCPGENMHCADVGLGYI 190


>U40942-3|AAU05564.1|  487|Caenorhabditis elegans Hypothetical
           protein K02E10.4b protein.
          Length = 487

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 291 GVVAACLQFFESHHGVGLHCSDIGLNVI 208
           G+   C Q   S  G  +HC+D+GL  I
Sbjct: 164 GLPMKCSQIARSCPGENMHCADVGLGYI 191


>U23519-4|AAK31501.1|  358|Caenorhabditis elegans Toxin-regulated
           target of p38mapkprotein 2 protein.
          Length = 358

 Score = 23.8 bits (49), Expect(2) = 9.3
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = +1

Query: 136 KQSLTLGTMNF-KNIALYGTNEFRLNYVKADIGAMEAHAVMTLEKLQARGNYTFATWFNS 312
           KQSL    +N  + I+    N   ++ VK D   +    + +  K+     Y+F   FN 
Sbjct: 226 KQSLKYVHLNIVRRISALNQNNEVIDTVKIDTTGV---GLPSKTKIAVGETYSFRPTFNV 282

Query: 313 VRGPFTVHITGL 348
              P  +H+ GL
Sbjct: 283 PALPPNIHVNGL 294



 Score = 21.4 bits (43), Expect(2) = 9.3
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = +1

Query: 394 IRAENIVMDLSASNIAVN 447
           ++ E+I++D+SASN  +N
Sbjct: 333 MQKEDILVDISASNNTLN 350


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.135    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,395,952
Number of Sequences: 27780
Number of extensions: 237919
Number of successful extensions: 688
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)