Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309G05f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    26   0.23 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.2  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    23   2.2  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   2.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   5.0  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 25.8 bits (54), Expect = 0.23
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
 Frame = -3

Query: 504 LSCFFICHNTNRNNISKCTKILSQVFFFNVLLQSSYKQL--FNGG---TSFWSFNLFPWN 340
           L   +IC  T  + I      ++ +F   +L+ + YKQL  F+G          N F W+
Sbjct: 176 LKAGYICTKTRASLICLLAWFIAALFTSPMLVIAEYKQLDYFDGSKVPACHTLANTF-WS 234

Query: 339 CSYWLDNSSVNFVRPIILSFI 277
             Y+L    + F+ P+I+  I
Sbjct: 235 ALYFLTIIFLFFIIPLIILLI 255


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = -3

Query: 225 GFWVFHYNYIYN 190
           GFW+FH +++++
Sbjct: 665 GFWLFHCHFLFH 676


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = +1

Query: 391 LFVAGLKQDIEEEDLREYFSTFGN 462
           L + G+ QDI+++ ++E +  FG+
Sbjct: 9   LSMMGVHQDIQDKVVQELYDIFGD 32


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 376 ATVKKLFVAGLKQDIEEEDLREYFST 453
           A   K+ + GLK DI++E+ R    T
Sbjct: 220 ANKTKILLVGLKIDIDQEEERNVVVT 245


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 4/12 (33%), Positives = 11/12 (91%)
 Frame = -3

Query: 225 GFWVFHYNYIYN 190
           G+W+FH +++++
Sbjct: 665 GYWLFHCHFLFH 676


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,510
Number of Sequences: 336
Number of extensions: 2362
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)