Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309G04f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    27   0.50 
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   2.0  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   3.6  
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    23   6.2  
AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    23   8.2  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   8.2  

>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 26.6 bits (56), Expect = 0.50
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 134 MFTKFFDTFSQFITKISVITHFRS 63
           +FT   DTFS  +T I +  HFRS
Sbjct: 307 LFTMILDTFSICVTVIVLNIHFRS 330


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 412 MFSTCEQTVLTAASSFLDPN 353
           M S CE+T+    SSF DP+
Sbjct: 327 MISACEKTMQRMTSSFPDPH 346


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 162 RASMKHNLTDVYQIFRH 112
           + + KHN T+V Q+F H
Sbjct: 339 KLAQKHNFTNVLQLFLH 355


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/40 (25%), Positives = 16/40 (40%)
 Frame = +2

Query: 122 IW*TSVRLCFILALVFRPKHEANCSKSESQNPRRAYGPCE 241
           +W   + LCF    +F  +   +CS        R Y  C+
Sbjct: 3   LWTVVIVLCFFATDLFALQDGESCSHQGESGVCRPYSKCK 42


>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -2

Query: 430 LVTPLIMFSTCEQTVLTAASSFLDPNHFST 341
           LVTP ++ + C+   L    SFL   H  T
Sbjct: 12  LVTPNLIVAECDTKGLIVEKSFLQSVHDCT 41


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 415 IMFSTCEQTVLTAASSFLDPN 353
           IM +TC++T+    +S  DP+
Sbjct: 263 IMLATCDKTMQRVTTSHSDPH 283


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,077
Number of Sequences: 2352
Number of extensions: 11751
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)