Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309G01f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7R9B7 Cluster: Rhoptry protein; n=4; Plasmodium (Vinck...    35   1.3  
UniRef50_UPI0000D555DB Cluster: PREDICTED: similar to fibrillin ...    33   4.0  
UniRef50_O58697 Cluster: Putative uncharacterized protein PH0968...    33   4.0  
UniRef50_P35556 Cluster: Fibrillin-2 precursor; n=101; Euteleost...    33   4.0  
UniRef50_Q4RU98 Cluster: Chromosome 1 SCAF14995, whole genome sh...    33   5.2  
UniRef50_A2E2R5 Cluster: PIKK family atypical protein kinase; n=...    32   9.2  

>UniRef50_Q7R9B7 Cluster: Rhoptry protein; n=4; Plasmodium
            (Vinckeia)|Rep: Rhoptry protein - Plasmodium yoelii
            yoelii
          Length = 2003

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 13/41 (31%), Positives = 26/41 (63%)
 Frame = -3

Query: 381  LHKL*FQHKYIYYAALINRYIYVLFNQDVATRNLIFMNYIH 259
            L K     K I++  +IN Y+Y L++++   +N+I++N+ H
Sbjct: 1928 LEKFNNHDKLIFFHNIINMYMYSLYDKNFYKKNIIYVNFFH 1968


>UniRef50_UPI0000D555DB Cluster: PREDICTED: similar to fibrillin 2
            precursor; n=3; Coelomata|Rep: PREDICTED: similar to
            fibrillin 2 precursor - Tribolium castaneum
          Length = 2925

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +2

Query: 8    GRWRCIRYLGYLSTLQRNGCIDLNDFLQ 91
            G ++CI + GYL T  R+ C+D+N+ L+
Sbjct: 1874 GSFQCICHPGYLLTTSRDSCVDINECLR 1901


>UniRef50_O58697 Cluster: Putative uncharacterized protein PH0968;
           n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized
           protein PH0968 - Pyrococcus horikoshii
          Length = 213

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = -2

Query: 298 RCNKEPNFYELYSLDRLFEISLLKIKICGLKFENKKAKSHE*IRIHHITTLYNIYY 131
           R  ++P   E Y + +L E++ +  +   LK EN+  K+HE I I     L   YY
Sbjct: 36  RERRDPKVQEYYKILKLMEMNNIDTRKFFLKLENRIRKTHEIITIEKAIELAKEYY 91


>UniRef50_P35556 Cluster: Fibrillin-2 precursor; n=101;
            Euteleostomi|Rep: Fibrillin-2 precursor - Homo sapiens
            (Human)
          Length = 2911

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 5    PGRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVC 103
            PG +RC+ Y G+++++    CID+N+  L   +C
Sbjct: 1302 PGEYRCLCYDGFMASMDMKTCIDVNECDLNSNIC 1335


>UniRef50_Q4RU98 Cluster: Chromosome 1 SCAF14995, whole genome shotgun
            sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 1
            SCAF14995, whole genome shotgun sequence - Tetraodon
            nigroviridis (Green puffer)
          Length = 3019

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +2

Query: 5    PGRWRCIRYLGYLSTLQRNGCIDLND 82
            PG +RC+ Y G+++++    CID+N+
Sbjct: 1281 PGEYRCLCYDGFMASMDMRTCIDVNE 1306


>UniRef50_A2E2R5 Cluster: PIKK family atypical protein kinase; n=2;
            Eukaryota|Rep: PIKK family atypical protein kinase -
            Trichomonas vaginalis G3
          Length = 2178

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 23/86 (26%), Positives = 44/86 (51%)
 Frame = +3

Query: 36   VIYLHYNETAAST*MIFCRTTFVGSIYNTQTA**ILYSVVM**IRIYSCDFAFLFSNFRP 215
            V++ ++NE ++   +   +  +  ++ N +TA  I++ + M  ++    DF F+ S++  
Sbjct: 1473 VLFPNFNELSSPPLVTLLKCKYNWAMGNNKTALEIVFRLTMNTLKASHHDFPFILSHYVD 1532

Query: 216  QILIFNNDISKSLSSEYNS*KLGSLL 293
              L FN    +SLS      KL SLL
Sbjct: 1533 WTLSFNERSKESLSDMTK--KLSSLL 1556


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 443,074,188
Number of Sequences: 1657284
Number of extensions: 7945416
Number of successful extensions: 14217
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14214
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)