Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309G01f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X62009-1|CAB56757.1| 754|Homo sapiens fibrillin 5 protein. 33 0.61
U03272-1|AAA18950.1| 2911|Homo sapiens fibrillin-2 protein. 33 0.61
AB209735-1|BAD92972.1| 1976|Homo sapiens fibrillin 2 (congenital... 33 0.61
X63556-1|CAA45118.1| 3002|Homo sapiens fibrillin protein. 31 2.4
L13923-1|AAB02036.1| 2871|Homo sapiens fibrillin protein. 31 2.4
AB177803-1|BAD16739.1| 2871|Homo sapiens fibrillin 1 protein. 31 2.4
X62008-1|CAB56534.1| 517|Homo sapiens fibrillin 15 protein. 30 4.3
AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form ... 30 4.3
AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form ... 30 4.3
AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form ... 30 4.3
AB177802-1|BAD16738.1| 1365|Homo sapiens fibrillin 1 protein. 30 4.3
AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein. 30 4.3
AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein. 30 4.3
AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein. 30 4.3
AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein. 30 4.3
AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein. 30 4.3
S81585-1|AAB36122.1| 131|Homo sapiens Mutant, 132 nt]. protein. 29 7.5
M59815-1|AAA51855.1| 1744|Homo sapiens complement component C4A ... 29 7.5
K02403-1|AAB59537.1| 1754|Homo sapiens complement component C4A ... 29 7.5
BX679671-6|CAM26069.1| 1744|Homo sapiens complement component C4... 29 7.5
BX679671-3|CAM26066.1| 1744|Homo sapiens complement component C4... 29 7.5
BC151204-1|AAI51205.1| 1744|Homo sapiens complement component 4A... 29 7.5
BC146673-1|AAI46674.1| 1698|Homo sapiens C4B protein protein. 29 7.5
BC063289-1|AAH63289.1| 1744|Homo sapiens complement component 4A... 29 7.5
BC012372-1|AAH12372.2| 202|Homo sapiens C4A protein protein. 29 7.5
AY379959-1|AAR89163.1| 1744|Homo sapiens C4B1 protein. 29 7.5
AL929593-4|CAI41782.1| 1744|Homo sapiens complement component 4A... 29 7.5
AL844853-21|CAI41869.1| 1744|Homo sapiens complement component 4... 29 7.5
AL662849-17|CAI17475.1| 1744|Homo sapiens complement component 4... 29 7.5
AL645922-22|CAI41750.1| 1744|Homo sapiens complement component 4... 29 7.5
AL645922-17|CAI41744.1| 1744|Homo sapiens complement component 4... 29 7.5
AL049547-8|CAB89302.1| 1744|Homo sapiens dJ34F7.4 (complement co... 29 7.5
AF019413-3|AAB67980.1| 1744|Homo sapiens complement component C4... 29 7.5
AB209989-1|BAE06071.1| 1751|Homo sapiens C4A variant protein pro... 29 7.5
>X62009-1|CAB56757.1| 754|Homo sapiens fibrillin 5 protein.
Length = 754
Score = 33.1 bits (72), Expect = 0.61
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 5 PGRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVC 103
PG +RC+ Y G+++++ CID+N+ L +C
Sbjct: 551 PGEYRCLCYDGFMASMDMKTCIDVNECDLNSNIC 584
>U03272-1|AAA18950.1| 2911|Homo sapiens fibrillin-2 protein.
Length = 2911
Score = 33.1 bits (72), Expect = 0.61
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 5 PGRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVC 103
PG +RC+ Y G+++++ CID+N+ L +C
Sbjct: 1302 PGEYRCLCYDGFMASMDMKTCIDVNECDLNSNIC 1335
>AB209735-1|BAD92972.1| 1976|Homo sapiens fibrillin 2 (congenital
contractural arachnodactyly) variant protein.
Length = 1976
Score = 33.1 bits (72), Expect = 0.61
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 5 PGRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVC 103
PG +RC+ Y G+++++ CID+N+ L +C
Sbjct: 367 PGEYRCLCYDGFMASMDMKTCIDVNECDLNSNIC 400
>X63556-1|CAA45118.1| 3002|Homo sapiens fibrillin protein.
Length = 3002
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 8 GRWRCIRYLGYLSTLQRNGCIDLNDFLQDYVC 103
G +RC GYL Q N C+D N+ L ++C
Sbjct: 2717 GGYRCSCPQGYLQHYQWNQCVDENECLSAHIC 2748
Score = 30.3 bits (65), Expect = 4.3
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 5 PGRWRCIRYLGYLSTLQRNGCIDLND 82
PG +RC+ Y G++++ C+D+N+
Sbjct: 1389 PGEYRCLCYDGFMASEDMKTCVDVNE 1414
>L13923-1|AAB02036.1| 2871|Homo sapiens fibrillin protein.
Length = 2871
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 8 GRWRCIRYLGYLSTLQRNGCIDLNDFLQDYVC 103
G +RC GYL Q N C+D N+ L ++C
Sbjct: 2586 GGYRCSCPQGYLQHYQWNQCVDENECLSAHIC 2617
Score = 30.3 bits (65), Expect = 4.3
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 5 PGRWRCIRYLGYLSTLQRNGCIDLND 82
PG +RC+ Y G++++ C+D+N+
Sbjct: 1258 PGEYRCLCYDGFMASEDMKTCVDVNE 1283
>AB177803-1|BAD16739.1| 2871|Homo sapiens fibrillin 1 protein.
Length = 2871
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 8 GRWRCIRYLGYLSTLQRNGCIDLNDFLQDYVC 103
G +RC GYL Q N C+D N+ L ++C
Sbjct: 2586 GGYRCSCPQGYLQHYQWNQCVDENECLSAHIC 2617
Score = 30.3 bits (65), Expect = 4.3
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 5 PGRWRCIRYLGYLSTLQRNGCIDLND 82
PG +RC+ Y G++++ C+D+N+
Sbjct: 1258 PGEYRCLCYDGFMASEDMKTCVDVNE 1283
>X62008-1|CAB56534.1| 517|Homo sapiens fibrillin 15 protein.
Length = 517
Score = 30.3 bits (65), Expect = 4.3
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 5 PGRWRCIRYLGYLSTLQRNGCIDLND 82
PG +RC+ Y G++++ C+D+N+
Sbjct: 462 PGEYRCLCYDGFMASEDMKTCVDVNE 487
>AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 3 protein.
Length = 2809
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 8 GRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVCRVY 112
G ++C + G+ ST R GC+D+N+ +Q+ C V+
Sbjct: 1134 GAFQCSCHAGFQSTPDRQGCVDINECRVQNGGCDVH 1169
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 5 PGRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVC 103
PG RC+ Y G+++T C+D+++ L ++C
Sbjct: 1216 PGGHRCLCYDGFMATPDMRTCVDVDECDLNPHIC 1249
>AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 2 protein.
Length = 2809
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 8 GRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVCRVY 112
G ++C + G+ ST R GC+D+N+ +Q+ C V+
Sbjct: 1134 GAFQCSCHAGFQSTPDRQGCVDINECRVQNGGCDVH 1169
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 5 PGRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVC 103
PG RC+ Y G+++T C+D+++ L ++C
Sbjct: 1216 PGGHRCLCYDGFMATPDMRTCVDVDECDLNPHIC 1249
>AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 1 protein.
Length = 2809
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 8 GRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVCRVY 112
G ++C + G+ ST R GC+D+N+ +Q+ C V+
Sbjct: 1134 GAFQCSCHAGFQSTPDRQGCVDINECRVQNGGCDVH 1169
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 5 PGRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVC 103
PG RC+ Y G+++T C+D+++ L ++C
Sbjct: 1216 PGGHRCLCYDGFMATPDMRTCVDVDECDLNPHIC 1249
>AB177802-1|BAD16738.1| 1365|Homo sapiens fibrillin 1 protein.
Length = 1365
Score = 30.3 bits (65), Expect = 4.3
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 5 PGRWRCIRYLGYLSTLQRNGCIDLND 82
PG +RC+ Y G++++ C+D+N+
Sbjct: 1258 PGEYRCLCYDGFMASEDMKTCVDVNE 1283
>AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 8 GRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVCRVY 112
G ++C + G+ ST R GC+D+N+ +Q+ C V+
Sbjct: 1134 GAFQCSCHAGFQSTPDRQGCVDINECRVQNGGCDVH 1169
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 5 PGRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVC 103
PG RC+ Y G+++T C+D+++ L ++C
Sbjct: 1216 PGGHRCLCYDGFMATPDMRTCVDVDECDLNPHIC 1249
>AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 8 GRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVCRVY 112
G ++C + G+ ST R GC+D+N+ +Q+ C V+
Sbjct: 1134 GAFQCSCHAGFQSTPDRQGCVDINECRVQNGGCDVH 1169
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 5 PGRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVC 103
PG RC+ Y G+++T C+D+++ L ++C
Sbjct: 1216 PGGHRCLCYDGFMATPDMRTCVDVDECDLNPHIC 1249
>AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 8 GRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVCRVY 112
G ++C + G+ ST R GC+D+N+ +Q+ C V+
Sbjct: 1134 GAFQCSCHAGFQSTPDRQGCVDINECRVQNGGCDVH 1169
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 5 PGRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVC 103
PG RC+ Y G+++T C+D+++ L ++C
Sbjct: 1216 PGGHRCLCYDGFMATPDMRTCVDVDECDLNPHIC 1249
>AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 8 GRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVCRVY 112
G ++C + G+ ST R GC+D+N+ +Q+ C V+
Sbjct: 1134 GAFQCSCHAGFQSTPDRQGCVDINECRVQNGGCDVH 1169
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 5 PGRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVC 103
PG RC+ Y G+++T C+D+++ L ++C
Sbjct: 1216 PGGHRCLCYDGFMATPDMRTCVDVDECDLNPHIC 1249
>AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein.
Length = 2816
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 8 GRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVCRVY 112
G ++C + G+ ST R GC+D+N+ +Q+ C V+
Sbjct: 1141 GAFQCSCHAGFQSTPDRQGCVDINECRVQNGGCDVH 1176
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 5 PGRWRCIRYLGYLSTLQRNGCIDLNDF-LQDYVC 103
PG RC+ Y G+++T C+D+++ L ++C
Sbjct: 1223 PGGHRCLCYDGFMATPDMRTCVDVDECDLNPHIC 1256
>S81585-1|AAB36122.1| 131|Homo sapiens Mutant, 132 nt]. protein.
Length = 131
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 44 STLQRNGCIDLNDFLQDY 97
ST QR C LNDFLQ+Y
Sbjct: 107 STRQRAACAQLNDFLQEY 124
>M59815-1|AAA51855.1| 1744|Homo sapiens complement component C4A
protein.
Length = 1744
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 44 STLQRNGCIDLNDFLQDY 97
ST QR C LNDFLQ+Y
Sbjct: 1720 STRQRAACAQLNDFLQEY 1737
>K02403-1|AAB59537.1| 1754|Homo sapiens complement component C4A
protein.
Length = 1754
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 44 STLQRNGCIDLNDFLQDY 97
ST QR C LNDFLQ+Y
Sbjct: 1730 STRQRAACAQLNDFLQEY 1747
>BX679671-6|CAM26069.1| 1744|Homo sapiens complement component C4B
(Childo blood group) 2 protein.
Length = 1744
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 44 STLQRNGCIDLNDFLQDY 97
ST QR C LNDFLQ+Y
Sbjct: 1720 STRQRAACAQLNDFLQEY 1737
>BX679671-3|CAM26066.1| 1744|Homo sapiens complement component C4B
(Childo blood group) protein.
Length = 1744
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 44 STLQRNGCIDLNDFLQDY 97
ST QR C LNDFLQ+Y
Sbjct: 1720 STRQRAACAQLNDFLQEY 1737
>BC151204-1|AAI51205.1| 1744|Homo sapiens complement component 4A
(Rodgers blood group) protein.
Length = 1744
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 44 STLQRNGCIDLNDFLQDY 97
ST QR C LNDFLQ+Y
Sbjct: 1720 STRQRAACAQLNDFLQEY 1737
>BC146673-1|AAI46674.1| 1698|Homo sapiens C4B protein protein.
Length = 1698
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 44 STLQRNGCIDLNDFLQDY 97
ST QR C LNDFLQ+Y
Sbjct: 1674 STRQRAACAQLNDFLQEY 1691
>BC063289-1|AAH63289.1| 1744|Homo sapiens complement component 4A
(Rodgers blood group) protein.
Length = 1744
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 44 STLQRNGCIDLNDFLQDY 97
ST QR C LNDFLQ+Y
Sbjct: 1720 STRQRAACAQLNDFLQEY 1737
>BC012372-1|AAH12372.2| 202|Homo sapiens C4A protein protein.
Length = 202
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 44 STLQRNGCIDLNDFLQDY 97
ST QR C LNDFLQ+Y
Sbjct: 178 STRQRAACAQLNDFLQEY 195
>AY379959-1|AAR89163.1| 1744|Homo sapiens C4B1 protein.
Length = 1744
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 44 STLQRNGCIDLNDFLQDY 97
ST QR C LNDFLQ+Y
Sbjct: 1720 STRQRAACAQLNDFLQEY 1737
>AL929593-4|CAI41782.1| 1744|Homo sapiens complement component 4A
(Rodgers blood group) protein.
Length = 1744
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 44 STLQRNGCIDLNDFLQDY 97
ST QR C LNDFLQ+Y
Sbjct: 1720 STRQRAACAQLNDFLQEY 1737
>AL844853-21|CAI41869.1| 1744|Homo sapiens complement component 4A
protein.
Length = 1744
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 44 STLQRNGCIDLNDFLQDY 97
ST QR C LNDFLQ+Y
Sbjct: 1720 STRQRAACAQLNDFLQEY 1737
>AL662849-17|CAI17475.1| 1744|Homo sapiens complement component 4B
(Childo blood group) protein.
Length = 1744
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 44 STLQRNGCIDLNDFLQDY 97
ST QR C LNDFLQ+Y
Sbjct: 1720 STRQRAACAQLNDFLQEY 1737
>AL645922-22|CAI41750.1| 1744|Homo sapiens complement component 4A
(Rodgers blood group) protein.
Length = 1744
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 44 STLQRNGCIDLNDFLQDY 97
ST QR C LNDFLQ+Y
Sbjct: 1720 STRQRAACAQLNDFLQEY 1737
>AL645922-17|CAI41744.1| 1744|Homo sapiens complement component 4B
(Childo blood group) protein.
Length = 1744
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 44 STLQRNGCIDLNDFLQDY 97
ST QR C LNDFLQ+Y
Sbjct: 1720 STRQRAACAQLNDFLQEY 1737
>AL049547-8|CAB89302.1| 1744|Homo sapiens dJ34F7.4 (complement
component 4A) protein.
Length = 1744
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 44 STLQRNGCIDLNDFLQDY 97
ST QR C LNDFLQ+Y
Sbjct: 1720 STRQRAACAQLNDFLQEY 1737
>AF019413-3|AAB67980.1| 1744|Homo sapiens complement component C4
protein.
Length = 1744
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 44 STLQRNGCIDLNDFLQDY 97
ST QR C LNDFLQ+Y
Sbjct: 1720 STRQRAACAQLNDFLQEY 1737
>AB209989-1|BAE06071.1| 1751|Homo sapiens C4A variant protein protein.
Length = 1751
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 44 STLQRNGCIDLNDFLQDY 97
ST QR C LNDFLQ+Y
Sbjct: 1727 STRQRAACAQLNDFLQEY 1744
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,650,727
Number of Sequences: 237096
Number of extensions: 1099939
Number of successful extensions: 1639
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1639
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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