Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309G01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT009985-1|AAQ22454.1|  695|Drosophila melanogaster RE53253p pro...    28   6.7  
AY118697-1|AAM50557.1|  699|Drosophila melanogaster AT19081p pro...    28   6.7  
AF270979-1|AAG02041.1|  856|Drosophila melanogaster E23 protein.       28   6.7  
AF237722-1|AAF63744.1|  699|Drosophila melanogaster Ku80 protein.      28   6.7  
AE014134-2639|AAG22435.1|  699|Drosophila melanogaster CG18801-P...    28   6.7  
AE014134-588|AAF51121.2|  854|Drosophila melanogaster CG3327-PA,...    28   6.7  
AE014134-587|AAS64617.1| 1017|Drosophila melanogaster CG3327-PC,...    28   6.7  

>BT009985-1|AAQ22454.1|  695|Drosophila melanogaster RE53253p
           protein.
          Length = 695

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +2

Query: 401 INICN*H*HSFKSQNERVHSLRNTVLNHRV 490
           INICN H     SQN+  HSL+ T  N  V
Sbjct: 331 INICNSHHPHHHSQNQPQHSLQLTFQNLNV 360


>AY118697-1|AAM50557.1|  699|Drosophila melanogaster AT19081p
           protein.
          Length = 699

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +2

Query: 23  IRYLGYLSTLQRNGCIDLNDFLQ 91
           I  LG L TL R  CID N FL+
Sbjct: 609 IGQLGELITLYRQSCIDFNTFLE 631


>AF270979-1|AAG02041.1|  856|Drosophila melanogaster E23 protein.
          Length = 856

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +2

Query: 401 INICN*H*HSFKSQNERVHSLRNTVLNHRV 490
           INICN H     SQN+  HSL+ T  N  V
Sbjct: 170 INICNSHHPHHHSQNQPQHSLQLTFQNLNV 199


>AF237722-1|AAF63744.1|  699|Drosophila melanogaster Ku80 protein.
          Length = 699

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +2

Query: 23  IRYLGYLSTLQRNGCIDLNDFLQ 91
           I  LG L TL R  CID N FL+
Sbjct: 609 IGQLGELITLYRQSCIDFNTFLE 631


>AE014134-2639|AAG22435.1|  699|Drosophila melanogaster CG18801-PA
           protein.
          Length = 699

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +2

Query: 23  IRYLGYLSTLQRNGCIDLNDFLQ 91
           I  LG L TL R  CID N FL+
Sbjct: 609 IGQLGELITLYRQSCIDFNTFLE 631


>AE014134-588|AAF51121.2|  854|Drosophila melanogaster CG3327-PA,
           isoform A protein.
          Length = 854

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +2

Query: 401 INICN*H*HSFKSQNERVHSLRNTVLNHRV 490
           INICN H     SQN+  HSL+ T  N  V
Sbjct: 168 INICNSHHPHHHSQNQPQHSLQLTFQNLNV 197


>AE014134-587|AAS64617.1| 1017|Drosophila melanogaster CG3327-PC,
           isoform C protein.
          Length = 1017

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +2

Query: 401 INICN*H*HSFKSQNERVHSLRNTVLNHRV 490
           INICN H     SQN+  HSL+ T  N  V
Sbjct: 331 INICNSHHPHHHSQNQPQHSLQLTFQNLNV 360


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,100,107
Number of Sequences: 53049
Number of extensions: 361753
Number of successful extensions: 564
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)