Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309F09f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g11010.1 68417.m01790 nucleoside diphosphate kinase 3, mitoch... 209 7e-55
At4g09320.1 68417.m01542 nucleoside diphosphate kinase 1 (NDK1) ... 206 9e-54
At4g23900.1 68417.m03438 nucleoside diphosphate kinase 4 (NDK4) ... 205 1e-53
At5g63310.1 68418.m07945 nucleotide diphosphate kinase II, chlor... 201 2e-52
At1g17410.1 68414.m02126 nucleoside diphosphate kinase family pr... 89 1e-18
At3g47450.2 68416.m05160 expressed protein 31 0.62
At3g47450.1 68416.m05159 expressed protein 31 0.62
At5g67430.1 68418.m08502 GCN5-related N-acetyltransferase (GNAT)... 30 1.1
At2g34040.2 68415.m04168 apoptosis inhibitory 5 (API5) family pr... 29 2.5
At2g34040.1 68415.m04167 apoptosis inhibitory 5 (API5) family pr... 29 2.5
At1g01860.1 68414.m00104 dimethyladenosine transferase (PFC1) id... 29 2.5
At4g22980.1 68417.m03316 expressed protein ; expression supporte... 28 3.3
At1g60790.1 68414.m06843 expressed protein 27 5.8
>At4g11010.1 68417.m01790 nucleoside diphosphate kinase 3,
mitochondrial (NDK3) identical to Nucleoside diphosphate
kinase III, mitochondrial precursor (NDK III) (NDP
kinase III) (NDPK III) (SP:O49203) [Arabidopsis
thaliana]; contains Pfam PF00334 : Nucleoside
diphosphate kinase domain;
Length = 238
Score = 209 bits (511), Expect = 7e-55
Identities = 91/153 (59%), Positives = 119/153 (77%)
Frame = +1
Query: 16 MMAEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASR 195
++A + ERTFI +KPDGVQRGL+ II RFE+KGFKLVG+K + PS++ Q+HY DL R
Sbjct: 83 VLAAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVIVPSKDFAQKHYHDLKER 142
Query: 196 PFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIH 375
PFF GL ++SSGPV+ MVWEG V++ GR+++GAT+P S+PGTIRGDL + VGRNIIH
Sbjct: 143 PFFNGLCDFLSSGPVIAMVWEGDGVIRYGRKLIGATDPQKSEPGTIRGDLAVTVGRNIIH 202
Query: 376 GSDSVESAKKEIGLWFTDKEVVGWTPANENWVY 474
GSD E+AK EI LWF +E+V +T +E W+Y
Sbjct: 203 GSDGPETAKDEISLWFKPQELVSYTSNSEKWLY 235
>At4g09320.1 68417.m01542 nucleoside diphosphate kinase 1 (NDK1)
identical to identical to Nucleoside diphosphate kinase
I (NDK I) (NDP kinase I) (NDPK I) (SP:P39207)
[Arabidopsis thaliana]; contains Pfam PF00334 :
Nucleoside diphosphate kinase domain;
Length = 169
Score = 206 bits (502), Expect = 9e-54
Identities = 94/148 (63%), Positives = 113/148 (76%)
Frame = +1
Query: 34 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 213
E+TFIM+KPDGVQRGL+G +I RFEKKGF L GLK + ++HY DL+S+ FF GL
Sbjct: 22 EQTFIMIKPDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSGL 81
Query: 214 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVE 393
V Y+ SGPVV M+WEG NVV TGR+++GATNPA S+PGTIRGD I +GRN+IHGSDSVE
Sbjct: 82 VDYIVSGPVVAMIWEGKNVVLTGRKIIGATNPAASEPGTIRGDFAIDIGRNVIHGSDSVE 141
Query: 394 SAKKEIGLWFTDKEVVGWTPANENWVYE 477
SA+KEI LWF D V W + WVYE
Sbjct: 142 SARKEIALWFPDGP-VNWQSSVHPWVYE 168
>At4g23900.1 68417.m03438 nucleoside diphosphate kinase 4 (NDK4)
contains Pfam PF00334 : Nucleoside diphosphate kinase
domain; identical to nucleoside diphosphate kinase 4
(GI:11990430) [Arabidopsis thaliana]
Length = 237
Score = 205 bits (501), Expect = 1e-53
Identities = 91/152 (59%), Positives = 116/152 (76%)
Frame = +1
Query: 19 MAEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRP 198
+A + ERTFI +KPDGVQRGL+ II RFE+KG+KLVG+K + PS+ Q+HY DL RP
Sbjct: 83 LAAEMERTFIAIKPDGVQRGLISEIITRFERKGYKLVGIKVMVPSKGFAQKHYHDLKERP 142
Query: 199 FFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHG 378
FF GL ++SSGPVV MVWEG V++ GR+++GAT+P S+PGTIRGDL + VGRNIIHG
Sbjct: 143 FFNGLCNFLSSGPVVAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHG 202
Query: 379 SDSVESAKKEIGLWFTDKEVVGWTPANENWVY 474
SD E+AK EI LWF +E+V +T E W+Y
Sbjct: 203 SDGPETAKDEISLWFKPEELVSYTSNAEKWIY 234
>At5g63310.1 68418.m07945 nucleotide diphosphate kinase II,
chloroplast (NDPK2) identical to SP|O64903 Nucleoside
diphosphate kinase II, chloroplast precursor (NDK II)
(NDP kinase II) (NDPK II) (NDPK Ia) [Arabidopsis
thaliana]; contains Pfam PF00334 : Nucleoside
diphosphate kinase domain; contains Pfam profile
PF00334: Nucleoside diphosphate kinase
Length = 231
Score = 201 bits (491), Expect = 2e-52
Identities = 87/151 (57%), Positives = 115/151 (76%)
Frame = +1
Query: 25 EQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFF 204
E E T+IMVKPDG+QRGLVG II RFEKKGFKL+GLK +EL ++HY DL+++ FF
Sbjct: 81 EDVEETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFF 140
Query: 205 PGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSD 384
P L++Y++SGPVV M WEG+ VV + R+++G T+P ++PGTIRGDL +Q GRNI+HGSD
Sbjct: 141 PNLIEYITSGPVVCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSD 200
Query: 385 SVESAKKEIGLWFTDKEVVGWTPANENWVYE 477
S E+ K+EIGLWF + E+ W A W+ E
Sbjct: 201 SPENGKREIGLWFKEGELCKWDSALATWLRE 231
>At1g17410.1 68414.m02126 nucleoside diphosphate kinase family
protein contains Pfam PF00334 : Nucleoside diphosphate
kinase domain; similar to Nucleoside diphosphate kinase
homolog 5 (NDK-H 5) (NDP kinase homolog 5) (nm23-H5)
(Testis-specific nm23 homolog) (Inhibitor of p53-induced
apoptosis-beta) (IPIA-beta) (SP:P56597) {Homo sapiens}
Length = 181
Score = 89.4 bits (212), Expect = 1e-18
Identities = 53/139 (38%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Frame = +1
Query: 22 AEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPF 201
A ERT M+KPDGV I + GF +V +E Y + +SR F
Sbjct: 29 ASSEERTLAMIKPDGVSGNYTEEIKTIVVEAGFNIVKEMLTQLDKETASAFYEEHSSRSF 88
Query: 202 FPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPAD---SQPGTIRGDLCIQVGRNII 372
FP LV YM+SGPV+ MV E N V R ++G T+ S P +IR +N +
Sbjct: 89 FPHLVTYMTSGPVLVMVLEKRNAVSDWRDLIGPTDAEKAKISHPHSIRALCGKNSQKNCV 148
Query: 373 HGSDSVESAKKEIGLWFTD 429
HGSDS SA++EI +F D
Sbjct: 149 HGSDSTSSAEREIKFFFKD 167
>At3g47450.2 68416.m05160 expressed protein
Length = 561
Score = 30.7 bits (66), Expect = 0.62
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = -1
Query: 419 QRPISFLADSTLSEPWMMLRPT*MQRS--PRIVPGCESAGLVAPSI*RPVFTTLRPSHTI 246
+RP S +A S L W+ + P R PR + E + S+ +PV LRP+ I
Sbjct: 478 KRPASDVAISGLG--WISIEPIRKTRGTEPRDLNEAEHEIHICVSVPKPVEVFLRPTLPI 535
Query: 245 GTTGPE 228
GT+G E
Sbjct: 536 GTSGTE 541
>At3g47450.1 68416.m05159 expressed protein
Length = 561
Score = 30.7 bits (66), Expect = 0.62
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = -1
Query: 419 QRPISFLADSTLSEPWMMLRPT*MQRS--PRIVPGCESAGLVAPSI*RPVFTTLRPSHTI 246
+RP S +A S L W+ + P R PR + E + S+ +PV LRP+ I
Sbjct: 478 KRPASDVAISGLG--WISIEPIRKTRGTEPRDLNEAEHEIHICVSVPKPVEVFLRPTLPI 535
Query: 245 GTTGPE 228
GT+G E
Sbjct: 536 GTSGTE 541
>At5g67430.1 68418.m08502 GCN5-related N-acetyltransferase (GNAT)
family protein contains Pfam profile PF00583:
acetyltransferase, GNAT family
Length = 386
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 390 NAVRTMDDVTPNLNAEITADSAGLRVS 310
NA+R DDV+P +N A +GLRVS
Sbjct: 79 NALRQADDVSPEINTTKLAFVSGLRVS 105
>At2g34040.2 68415.m04168 apoptosis inhibitory 5 (API5) family
protein contains Pfam domain PF05918 Apoptosis
inhibitory protein 5 (API5)
Length = 442
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 464 FSFAGVQPTTSLSVNQRPISFLADSTLSEPWMMLRP 357
F+ AGV PTT + ++ ++F+ D + +L+P
Sbjct: 146 FTHAGVTPTTDDQIREKVLNFIRDKVIPLKGELLKP 181
>At2g34040.1 68415.m04167 apoptosis inhibitory 5 (API5) family
protein contains Pfam domain PF05918 Apoptosis
inhibitory protein 5 (API5)
Length = 553
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 464 FSFAGVQPTTSLSVNQRPISFLADSTLSEPWMMLRP 357
F+ AGV PTT + ++ ++F+ D + +L+P
Sbjct: 146 FTHAGVTPTTDDQIREKVLNFIRDKVIPLKGELLKP 181
>At1g01860.1 68414.m00104 dimethyladenosine transferase (PFC1)
identical to dimethyladenosine transferase GB:AAC09322
GI:3005590 from [Arabidopsis thaliana]
Length = 343
Score = 28.7 bits (61), Expect = 2.5
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Frame = -3
Query: 495 YRLINLLIN----PVFICRCPAHNFFVR-KPEAYFLFSRFNAVRTMDDVTPNLNAEITAD 331
YR IN+LIN P + R P NFF + K +A + + R DV+ N +
Sbjct: 228 YRPINILINFYSEPEYNFRVPRENFFPQPKVDAAVVTFKLKHPRDYPDVSSTKNFFSLVN 287
Query: 330 SA--GLRVSWVSCAKHLTASLHNIKAL 256
SA G R +H+++S KAL
Sbjct: 288 SAFNGKRKMLRKSLQHISSSPDIEKAL 314
>At4g22980.1 68417.m03316 expressed protein ; expression supported
by MPSS
Length = 559
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 82 VGTIIERFEKKGFKLVGLKFVWPSEELLQQ 171
V +I EKKG K +F WPS E+L +
Sbjct: 205 VEEMIRISEKKGIKPQSAEFSWPSTEILSE 234
>At1g60790.1 68414.m06843 expressed protein
Length = 541
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -3
Query: 114 FLFETFNNGAHKTTLYTIRLNHNKSTLTLFRHHEILL 4
F+ E+ G + TTL T+RL+ T +++R +IL+
Sbjct: 324 FVRESSFKGVNGTTLETLRLDMMDKTTSMYRDADILI 360
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,482,926
Number of Sequences: 28952
Number of extensions: 233920
Number of successful extensions: 648
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -