Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309F07f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...   137   2e-31
UniRef50_Q8MTP2 Cluster: Bm101; n=1; Bombyx mori|Rep: Bm101 - Bo...    38   0.11 
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    38   0.14 
UniRef50_A5ACQ5 Cluster: Putative uncharacterized protein; n=1; ...    35   1.3  
UniRef50_Q6ZTR8 Cluster: Axonemal dynein heavy chain 7-like prot...    33   5.2  
UniRef50_UPI000023E205 Cluster: hypothetical protein FG05795.1; ...    32   9.2  

>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score =  137 bits (331), Expect = 2e-31
 Identities = 63/69 (91%), Positives = 65/69 (94%)
 Frame = -1

Query: 440  GECSDELFEMIPSSRFYHRTARHRSRVHPYYLEPLRPSTVRFQRSFLSRTIRL*NELPST 261
            GECS+ELFEMIP+SRFYHRTARHRSRVHPYYLEPLR STVRFQRSFL RTIRL NELPST
Sbjct: 889  GECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPST 948

Query: 260  VFPERYDTS 234
            VFPERYD S
Sbjct: 949  VFPERYDMS 957



 Score = 48.8 bits (111), Expect = 7e-05
 Identities = 22/29 (75%), Positives = 23/29 (79%)
 Frame = -3

Query: 237  FFKHGLWRVLYGRQQFDSDLGIAEVHGRR 151
            FFK GLWRVL GRQ+  S  GIAEVHGRR
Sbjct: 958  FFKRGLWRVLSGRQRLGSAPGIAEVHGRR 986


>UniRef50_Q8MTP2 Cluster: Bm101; n=1; Bombyx mori|Rep: Bm101 -
           Bombyx mori (Silk moth)
          Length = 92

 Score = 38.3 bits (85), Expect = 0.11
 Identities = 18/22 (81%), Positives = 18/22 (81%)
 Frame = +2

Query: 359 ELYSGGGRCDGKNEKMVSSQTI 424
           E Y GG RCDGKNE MVSSQTI
Sbjct: 4   EFYDGG-RCDGKNETMVSSQTI 24


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 37.9 bits (84), Expect = 0.14
 Identities = 17/23 (73%), Positives = 17/23 (73%)
 Frame = -1

Query: 161 MGDGNHSQSNWPYARLPTRAIKK 93
           MGDGNHS S  PYA LPTRA  K
Sbjct: 1   MGDGNHSPSGRPYASLPTRAKMK 23


>UniRef50_A5ACQ5 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 334

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = -1

Query: 410 IPSSRFYHRTARHRSRVHPYYLEPLRPSTVRFQRSFLSRTIRL*NELPSTVFPERY 243
           +P + FY     HRSR  P  + P RPS   F R   +RT      LP  + P+ +
Sbjct: 236 LPITTFYPHPDAHRSRNPPAAITPRRPSLSEFPRRHYTRTPIAPGILPPPLHPDAH 291


>UniRef50_Q6ZTR8 Cluster: Axonemal dynein heavy chain 7-like
           protein; n=41; Eumetazoa|Rep: Axonemal dynein heavy
           chain 7-like protein - Homo sapiens (Human)
          Length = 784

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 5/99 (5%)
 Frame = +1

Query: 52  QILLDYHYNTAHQFFFIALVGRRAYGQFDCE*LPSPMDFSNAKVRVKLLPTVKYSPQAMF 231
           ++LLD  Y T      +   G RA G  DCE L + +         K++ T       +F
Sbjct: 212 KMLLDLGYTTFADTVLLDFTGIRAKGPIDCESLKTDLSIQTRNAEEKIMNTWYPKVINLF 271

Query: 232 EEVS*RSG---NTVDG--SSFQSRMVRDKKDLWKRTVDG 333
            +     G     +D   S   + M    KDL +RTV+G
Sbjct: 272 TKKEALEGVKPEKLDAFYSCVSTLMSNQLKDLLRRTVEG 310


>UniRef50_UPI000023E205 Cluster: hypothetical protein FG05795.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG05795.1 - Gibberella zeae PH-1
          Length = 509

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -3

Query: 258 VSRAL*HFFKHGLWRVLYGRQQFDSDLGIAEVHGRR 151
           +S AL H    G WR L GR QF +D G  E+H  R
Sbjct: 48  LSAALTHLLSQGDWRKLGGRLQF-NDTGKLEIHAPR 82


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,111,357
Number of Sequences: 1657284
Number of extensions: 10239117
Number of successful extensions: 23118
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23117
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)