BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS309F07f (521 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_01_0594 + 4428440-4429837 29 3.0 07_03_0697 + 20759176-20759817,20760592-20760708,20761422-207616... 28 4.0 11_01_0321 + 2415799-2415972,2418060-2418351,2418757-2419610 27 6.9 08_01_0196 - 1619165-1619605,1620393-1620677,1621040-1621144 27 6.9 04_03_0115 - 11428116-11429594 27 6.9 03_06_0372 + 33446153-33446665,33446744-33446993,33447347-334475... 27 6.9 01_06_0877 + 32662978-32663179,32663718-32663951,32664080-326641... 27 6.9 04_04_0716 + 27513201-27513854 27 9.1 04_03_0117 - 11461460-11462755 27 9.1 >07_01_0594 + 4428440-4429837 Length = 465 Score = 28.7 bits (61), Expect = 3.0 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%) Frame = +3 Query: 327 RWSQWLQVVWMNSTPVAGGAMV---KTRRWYHLKQFIRA 434 RW++W V S+ GGA+V RRW+ K ++ A Sbjct: 334 RWARWWLAVDTASSSAGGGALVLVATERRWWKQKMYMCA 372 >07_03_0697 + 20759176-20759817,20760592-20760708,20761422-20761696, 20761906-20762068,20762293-20762421,20762989-20763713, 20763853-20764081 Length = 759 Score = 28.3 bits (60), Expect = 4.0 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = +2 Query: 356 DELYSGGGRCDGKNEKMVSSQTIHQSTPQ--LLRYDKLN*LRVFESAFLC 499 D YSGG D E+ SS T H S + LR +LN LR + + +C Sbjct: 304 DGEYSGGDDDDDDEEEEDSSDTEHDSEAENNKLRTYELNRLRYYYAVVVC 353 >11_01_0321 + 2415799-2415972,2418060-2418351,2418757-2419610 Length = 439 Score = 27.5 bits (58), Expect = 6.9 Identities = 15/65 (23%), Positives = 25/65 (38%) Frame = -1 Query: 419 FEMIPSSRFYHRTARHRSRVHPYYLEPLRPSTVRFQRSFLSRTIRL*NELPSTVFPERYD 240 F S+ Y H +H + PL+PST F R + L P P ++ Sbjct: 94 FSATGSTNTYSYVLYHSGNIHDVVIGPLQPSTTYFYRCSNDTSRELSFRTPPASLPFKFV 153 Query: 239 TSSNM 225 + ++ Sbjct: 154 VAGDL 158 >08_01_0196 - 1619165-1619605,1620393-1620677,1621040-1621144 Length = 276 Score = 27.5 bits (58), Expect = 6.9 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = +2 Query: 119 EHTANLIVSDYRRPWTS 169 +H A L VSDY R WTS Sbjct: 25 QHDAGLRVSDYNRVWTS 41 >04_03_0115 - 11428116-11429594 Length = 492 Score = 27.5 bits (58), Expect = 6.9 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = -2 Query: 376 ATGVEFIHTTWSHCDHLQCVSRDLFC 299 A G H+ W+H HL+ D FC Sbjct: 155 AFGSVVFHSLWNHLPHLRAPGDDAFC 180 >03_06_0372 + 33446153-33446665,33446744-33446993,33447347-33447501, 33447593-33447805,33447926-33448113,33448282-33448540 Length = 525 Score = 27.5 bits (58), Expect = 6.9 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = +2 Query: 332 VAVAPGSMDELYSGGGRCDGKNEKMVSSQTIHQSTPQLLRYD 457 + V+PG +++ G DG +KM+ +H T Q+L D Sbjct: 329 IPVSPGRCRVIWANGYNLDGWFDKMIPRWWLHIKTNQVLDSD 370 >01_06_0877 + 32662978-32663179,32663718-32663951,32664080-32664143, 32664250-32664379,32664483-32664624,32664806-32665063, 32665168-32665252,32665609-32665711,32666281-32666406, 32666476-32666589,32666769-32666887,32666993-32667080, 32667154-32667246,32667325-32667414,32667522-32667641, 32667782-32667877 Length = 687 Score = 27.5 bits (58), Expect = 6.9 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = +3 Query: 165 LQQCQGQSQTAAYRKVLSTSHV 230 LQ+C +S AAYRK ++ +++ Sbjct: 88 LQECMAESSHAAYRKAINAAYI 109 >04_04_0716 + 27513201-27513854 Length = 217 Score = 27.1 bits (57), Expect = 9.1 Identities = 10/25 (40%), Positives = 17/25 (68%) Frame = -1 Query: 275 ELPSTVFPERYDTSSNMACGEYFTV 201 +LP + RY+TSS+++CG + V Sbjct: 173 DLPDLLLDLRYETSSSLSCGASWAV 197 >04_03_0117 - 11461460-11462755 Length = 431 Score = 27.1 bits (57), Expect = 9.1 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = -2 Query: 376 ATGVEFIHTTWSHCDHLQCVSRDLFC 299 A G H+ W+H HL+ D FC Sbjct: 155 AFGSVVYHSLWNHLPHLRAPGDDAFC 180 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,890,016 Number of Sequences: 37544 Number of extensions: 291355 Number of successful extensions: 625 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 614 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 625 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1142636160 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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