Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS309F06f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 25 0.47
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 25 0.47
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 25 0.47
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 25 0.47
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 24 0.82
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 22 3.3
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 4.4
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 5.8
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 7.7
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 7.7
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 7.7
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 7.7
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 7.7
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 7.7
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 7.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 7.7
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 21 7.7
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 25.0 bits (52), Expect = 0.47
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 105 SRGRTSARDRVAEPPMMKRKINKTINIYNY*KKIR 1
SR RT R+R EP ++ +N TI+ N KK++
Sbjct: 289 SRDRTE-RERSREPKIISSLLNNTIHNNNNYKKLQ 322
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.0 bits (52), Expect = 0.47
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 105 SRGRTSARDRVAEPPMMKRKINKTINIYNY*KKIR 1
SR RT R+R EP ++ +N TI+ N KK++
Sbjct: 300 SRDRTE-RERSREPKIISSLLNNTIHNNNNYKKLQ 333
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.0 bits (52), Expect = 0.47
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 105 SRGRTSARDRVAEPPMMKRKINKTINIYNY*KKIR 1
SR RT R+R EP ++ +N TI+ N KK++
Sbjct: 300 SRDRTE-RERSREPKIISSLLNNTIHNNNNYKKLQ 333
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 25.0 bits (52), Expect = 0.47
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 105 SRGRTSARDRVAEPPMMKRKINKTINIYNY*KKIR 1
SR RT R+R EP ++ +N TI+ N KK++
Sbjct: 289 SRDRTE-RERSREPKIISSLLNNTIHNNNNYKKLQ 322
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.2 bits (50), Expect = 0.82
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 105 SRGRTSARDRVAEPPMMKRKINKTINIYNY*KKI 4
SR R R+R EP ++ N TI+ NY KK+
Sbjct: 300 SRDRIE-RERSREPKIISSLSNNTIHNNNYNKKL 332
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 22.2 bits (45), Expect = 3.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 451 GTGPPLEEKDPKRLFEGNALLR 386
G G EEK P+ F G L R
Sbjct: 13 GNGGTPEEKRPRTAFSGEQLAR 34
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 77 LSLAEVLPLDTSRTTSTEW 133
LSL V+ LDT++ EW
Sbjct: 10 LSLVSVVLLDTTQEEKLEW 28
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 513 SHDVVKRRPVNCNTTHYRANWVPGP 439
S + K++P +C+T YR V P
Sbjct: 560 SDECNKKQPSDCDTLEYRNGEVTTP 584
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 302 LQEVLNLQTKHIIEFHLFFIQYSNTNQ 382
++ V N+ K + F L F+Q N N+
Sbjct: 42 IRPVQNMTEKVHVNFGLAFVQLINVNE 68
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 7.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 368 SNTNQTT*KGITFEQSLGVLLLEGGPGTQ 454
SNT++T E S G L G GTQ
Sbjct: 91 SNTSKTFILSEKLESSDGTSLFRGPEGTQ 119
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 7.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 368 SNTNQTT*KGITFEQSLGVLLLEGGPGTQ 454
SNT++T E S G L G GTQ
Sbjct: 91 SNTSKTFILSEKLESSDGTSLFRGPEGTQ 119
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 7.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 368 SNTNQTT*KGITFEQSLGVLLLEGGPGTQ 454
SNT++T E S G L G GTQ
Sbjct: 91 SNTSKTFILSEKLESSDGTSLFRGPEGTQ 119
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 7.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 368 SNTNQTT*KGITFEQSLGVLLLEGGPGTQ 454
SNT++T E S G L G GTQ
Sbjct: 91 SNTSKTFILSEKLESSDGTSLFRGPEGTQ 119
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 7.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 368 SNTNQTT*KGITFEQSLGVLLLEGGPGTQ 454
SNT++T E S G L G GTQ
Sbjct: 91 SNTSKTFILSEKLESSDGTSLFRGPEGTQ 119
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 7.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 368 SNTNQTT*KGITFEQSLGVLLLEGGPGTQ 454
SNT++T E S G L G GTQ
Sbjct: 91 SNTSKTFILSEKLESSDGTSLFRGPEGTQ 119
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.0 bits (42), Expect = 7.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 368 SNTNQTT*KGITFEQSLGVLLLEGGPGTQ 454
SNT++T E S G L G GTQ
Sbjct: 91 SNTSKTFILSEKLESSDGTSLFRGPEGTQ 119
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.0 bits (42), Expect = 7.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 368 SNTNQTT*KGITFEQSLGVLLLEGGPGTQ 454
SNT++T E S G L G GTQ
Sbjct: 91 SNTSKTFILSEKLESSDGTSLFRGPEGTQ 119
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 376 EPDDVEGHYLRTISWG 423
+PD E Y+RT+S G
Sbjct: 271 QPDTPEEKYIRTLSKG 286
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,127
Number of Sequences: 438
Number of extensions: 3242
Number of successful extensions: 19
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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