Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309F04f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094943-1|AAM11296.1|  469|Drosophila melanogaster RH56938p pro...    30   1.7  
AE014296-3283|AAF49064.2| 1029|Drosophila melanogaster CG7323-PA...    30   1.7  
AE014134-1157|AAF52432.1|  992|Drosophila melanogaster CG11323-P...    28   6.7  

>AY094943-1|AAM11296.1|  469|Drosophila melanogaster RH56938p
           protein.
          Length = 469

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -2

Query: 496 PFXVVSRIHYMSQIKFHQVPPTTAPPLERERVTAPGL 386
           P      I   + I +HQ+P T  PP  R +  +PG+
Sbjct: 381 PLRKTRNITSQNSINWHQIPATPTPPSPRSQYQSPGV 417


>AE014296-3283|AAF49064.2| 1029|Drosophila melanogaster CG7323-PA
            protein.
          Length = 1029

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -2

Query: 496  PFXVVSRIHYMSQIKFHQVPPTTAPPLERERVTAPGL 386
            P      I   + I +HQ+P T  PP  R +  +PG+
Sbjct: 941  PLRKTRNITSQNSINWHQIPATPTPPSPRSQYQSPGV 977


>AE014134-1157|AAF52432.1|  992|Drosophila melanogaster CG11323-PA
           protein.
          Length = 992

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 233 WSPVDSG*FIENVII*TCLYFIDL*HCEY 147
           WSP + G FIEN  +  C+ F+    C+Y
Sbjct: 283 WSPEELGEFIENFKLTACVAFLRAMLCKY 311


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,698,577
Number of Sequences: 53049
Number of extensions: 373733
Number of successful extensions: 770
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)