Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309F03f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7TSP9 Cluster: Tkp5 protein; n=4; Vanderwaltozyma poly...    35   1.3  
UniRef50_A1ATJ6 Cluster: DNA ligase, NAD-dependent; n=1; Pelobac...    34   2.3  
UniRef50_Q6AML0 Cluster: Putative uncharacterized protein; n=1; ...    32   6.9  
UniRef50_A0DVI2 Cluster: Chromosome undetermined scaffold_66, wh...    32   9.2  
UniRef50_A0CH66 Cluster: Chromosome undetermined scaffold_18, wh...    32   9.2  

>UniRef50_A7TSP9 Cluster: Tkp5 protein; n=4; Vanderwaltozyma
           polyspora DSM 70294|Rep: Tkp5 protein - Vanderwaltozyma
           polyspora DSM 70294
          Length = 1197

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 240 DILEGNVVDYYNKDPPTSFIEFKDFWISWHSG 335
           +I E  ++ YYN + PTS ++ K  WI+  SG
Sbjct: 263 EIWESGMIGYYNAEKPTSNVQVKGVWIATESG 294


>UniRef50_A1ATJ6 Cluster: DNA ligase, NAD-dependent; n=1; Pelobacter
           propionicus DSM 2379|Rep: DNA ligase, NAD-dependent -
           Pelobacter propionicus (strain DSM 2379)
          Length = 704

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 17/63 (26%), Positives = 30/63 (47%)
 Frame = +3

Query: 111 NSSAIRIRVSFPLSAEPHITFYSKFPPHQELYQLYIGDVFKLVDILEGNVVDYYNKDPPT 290
           N  A RI+    L A  +  +Y   PP +E++     ++FK +  LE    ++ + D PT
Sbjct: 12  NIVAERIQELRQLIAHNNRLYYENIPPRREIHDYEYDELFKELQELESRFPEFQSADSPT 71

Query: 291 SFI 299
             +
Sbjct: 72  QIV 74


>UniRef50_Q6AML0 Cluster: Putative uncharacterized protein; n=1;
           Desulfotalea psychrophila|Rep: Putative uncharacterized
           protein - Desulfotalea psychrophila
          Length = 482

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 348 GLCPNIEPMRCIKLQNAKKIGFVSFHIPTIIDEAEVRWVIE 470
           G+C N  P  C+ +   KKIGF+S++  TI   A   + ++
Sbjct: 263 GICGNDIPENCLAVSFQKKIGFISYNNQTICSFAHGLYCVD 303


>UniRef50_A0DVI2 Cluster: Chromosome undetermined scaffold_66, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_66, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 948

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 5/120 (4%)
 Frame = +3

Query: 27   YLMPIN*LEIMGDIVELNSTEGQVLYRANSSAIRIRVSFPLSAEPHITFYSKFPPHQELY 206
            YL  +  + I  DI+E+ + +G  L     + ++  +     A+P ++ YSK  P+  ++
Sbjct: 816  YLFFVRHIPINSDIIEVVNNKGLSLVAKLQAELQSEIEEFQKAQPKVSIYSKKNPYPHIH 875

Query: 207  QL---YIGDVFKLVDILEGNVVDYYNKDPPTSFIEFKDFWISWHSGKF--QYGLCPNIEP 371
            ++      ++    D+L         K  P S      FW      KF  ++ + PN  P
Sbjct: 876  EMPHTLSAEIDTTPDLLVWLSFCMNGKVGPESSAPINHFWEKKDESKFWQRHTVQPNTIP 935


>UniRef50_A0CH66 Cluster: Chromosome undetermined scaffold_18, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_18,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1570

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
 Frame = +1

Query: 148 YQQNHI*PFIQNF--HPIRNYISFILGMY-LNL*TY*RVMLLIITTKTHQLLLSSSKIFG 318
           +QQ +I PFIQ F  +P+   ISFI  +  + L +   +    +T+ TH L   +S    
Sbjct: 129 FQQQYIYPFIQRFPPYPVFKNISFIDDVSGITLDSLKLIDTGFLTSNTHSLKAQAS---- 184

Query: 319 YHGTVENFNMVCVLTLN 369
           Y+    N  M+CV+ +N
Sbjct: 185 YYS--PNLQMICVVRIN 199


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,054,809
Number of Sequences: 1657284
Number of extensions: 11149206
Number of successful extensions: 23224
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23222
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)