Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS309F03f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.41 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   3.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   6.6  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   6.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 452 LSFIYYCRDMKTYKTNFFCILKFY 381
           L   Y+CR    + T+F+C    Y
Sbjct: 296 LCIYYFCRAFIIFPTHFYCAFSLY 319


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 388 SFIHRMGSMLGHRPY*NFPLC 326
           + I  +G+ L +RP+ +FP C
Sbjct: 682 NLIIHVGTQLIYRPFSHFPRC 702


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 476 GSFNHPSNLSFIYYCRDMKTY 414
           G F+ P N +  Y CR   +Y
Sbjct: 564 GIFSDPKNCAAYYVCRSGLSY 584


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +3

Query: 294 FIEFKDFWISWHSG 335
           F+   D W+SW  G
Sbjct: 377 FLTRGDLWLSWEEG 390


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 267 YYNKDPPTSFIEFKDF 314
           YY+++PP  + E  DF
Sbjct: 26  YYHEEPPLFYEERPDF 41


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -1

Query: 482 YWGSFNHPSNLSFIYYCRDMKTYKTNFFCILKFYTS 375
           Y+G     + L    YC  +  +  + F IL +Y S
Sbjct: 306 YFGKTGRKTVLKTNKYCNFIILFYLSVFVILVYYAS 341


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,948
Number of Sequences: 336
Number of extensions: 3260
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)